RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 MYH14Q7Z406 1995 aaKnown RBP26.5■■□□□ 1.83
HERC6-205ENST00000504905 RC3H1Q5TC82 1133 aaKnown RBP26.5■■□□□ 1.83
HERC6-205ENST00000504905 MSL1Q68DK7 614 aa26.5■■□□□ 1.83
HERC6-205ENST00000504905 CD2APQ9Y5K6 639 aa26.5■■□□□ 1.83
HERC6-205ENST00000504905 KDM3BQ7LBC6 1761 aa26.5■■□□□ 1.83
HERC6-205ENST00000504905 HEG1Q9ULI3 1381 aa26.49■■□□□ 1.83
HERC6-205ENST00000504905 MIS18AQ9NYP9 233 aa26.49■■□□□ 1.83
HERC6-205ENST00000504905 TRIM35Q9UPQ4 493 aa26.49■■□□□ 1.83
HERC6-205ENST00000504905 PHF14O94880 888 aa26.48■■□□□ 1.83
HERC6-205ENST00000504905 CRKLP46109 303 aaKnown RBP26.48■■□□□ 1.83
HERC6-205ENST00000504905 CEP350Q5VT06 3117 aa26.48■■□□□ 1.83
HERC6-205ENST00000504905 SSFA2P28290 1259 aa26.47■■□□□ 1.83
HERC6-205ENST00000504905 FAM9BQ8IZU0 186 aa26.47■■□□□ 1.83
HERC6-205ENST00000504905 RTCBQ9Y3I0 505 aaKnown RBP26.47■■□□□ 1.83
HERC6-205ENST00000504905 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.46■■□□□ 1.83
HERC6-205ENST00000504905 AMIGO3Q86WK7 504 aa26.46■■□□□ 1.83
HERC6-205ENST00000504905 CYP19A1P11511 503 aaPredicted RBP26.45■■□□□ 1.82
HERC6-205ENST00000504905 TEX13AQ9BXU3 409 aaPredicted RBP26.45■■□□□ 1.82
HERC6-205ENST00000504905 SMIM5Q71RC9 77 aa26.44■■□□□ 1.82
HERC6-205ENST00000504905 CCDC87Q9NVE4 849 aa26.44■■□□□ 1.82
HERC6-205ENST00000504905 ATP10DQ9P241 1426 aa26.43■■□□□ 1.82
HERC6-205ENST00000504905 RPS6KA4O75676 772 aa26.43■■□□□ 1.82
HERC6-205ENST00000504905 STARD3NLO95772 234 aa26.43■■□□□ 1.82
HERC6-205ENST00000504905 TSPYL4Q9UJ04 414 aa26.43■■□□□ 1.82
HERC6-205ENST00000504905 CCER2I3L3R5 266 aa26.42■■□□□ 1.82
HERC6-205ENST00000504905 INTS5Q6P9B9 1019 aaKnown RBP26.42■■□□□ 1.82
HERC6-205ENST00000504905 SNRPA1P09661 255 aaKnown RBP26.41■■□□□ 1.82
HERC6-205ENST00000504905 TRAPPC3LQ5T215 181 aa26.41■■□□□ 1.82
HERC6-205ENST00000504905 BABAM1Q9NWV8 329 aa26.41■■□□□ 1.82
HERC6-205ENST00000504905 ADRA2BP18089 450 aa26.4■■□□□ 1.82
HERC6-205ENST00000504905 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.82
HERC6-205ENST00000504905 ADCY9O60503 1353 aa26.38■■□□□ 1.81
HERC6-205ENST00000504905 EIF4A1P60842 406 aaKnown RBP26.38■■□□□ 1.81
HERC6-205ENST00000504905 CALD1Q05682 793 aaKnown RBP26.38■■□□□ 1.81
HERC6-205ENST00000504905 IFFO2Q5TF58 517 aa26.38■■□□□ 1.81
HERC6-205ENST00000504905 ZBTB1Q9Y2K1 713 aa26.38■■□□□ 1.81
HERC6-205ENST00000504905 C4AP0C0L4 1744 aa26.38■■□□□ 1.81
HERC6-205ENST00000504905 LAMB4A4D0S4 1761 aa26.38■■□□□ 1.81
HERC6-205ENST00000504905 PRAMEF22A3QJZ6 481 aa26.36■■□□□ 1.81
HERC6-205ENST00000504905 RFC4P35249 363 aa26.36■■□□□ 1.81
HERC6-205ENST00000504905 ARHGEF1Q92888 912 aaKnown RBP26.36■■□□□ 1.81
HERC6-205ENST00000504905 GPBP1L1Q9HC44 474 aaPredicted RBP26.36■■□□□ 1.81
HERC6-205ENST00000504905 USP16Q9Y5T5 823 aa26.36■■□□□ 1.81
HERC6-205ENST00000504905 SOS1Q07889 1333 aaPredicted RBP26.36■■□□□ 1.81
HERC6-205ENST00000504905 CHL1O00533 1208 aa26.35■■□□□ 1.81
HERC6-205ENST00000504905 CANXP27824 592 aaKnown RBP26.35■■□□□ 1.81
HERC6-205ENST00000504905 CCDC27Q2M243 656 aa26.34■■□□□ 1.81
HERC6-205ENST00000504905 CFAP44Q96MT7 982 aa26.34■■□□□ 1.81
HERC6-205ENST00000504905 NCBP3Q53F19 620 aaKnown RBP26.33■■□□□ 1.81
HERC6-205ENST00000504905 MIER1Q8N108 512 aa26.33■■□□□ 1.81
HERC6-205ENST00000504905 COL15A1P39059 1388 aa26.33■■□□□ 1.8
HERC6-205ENST00000504905 A1BGP04217 495 aa26.32■■□□□ 1.8
HERC6-205ENST00000504905 IFT57Q9NWB7 429 aa26.31■■□□□ 1.8
HERC6-205ENST00000504905 GNAI1P63096 354 aa26.3■■□□□ 1.8
HERC6-205ENST00000504905 WWC1Q8IX03 1113 aa26.3■■□□□ 1.8
HERC6-205ENST00000504905 SALL2Q9Y467 1007 aaPredicted RBP26.3■■□□□ 1.8
HERC6-205ENST00000504905 ZNF330Q9Y3S2 320 aaPredicted RBP26.29■■□□□ 1.8
HERC6-205ENST00000504905 ZNF853P0CG23 659 aa26.28■■□□□ 1.8
HERC6-205ENST00000504905 IL6STP40189 918 aaPredicted RBP26.28■■□□□ 1.8
HERC6-205ENST00000504905 EIF5P55010 431 aaKnown RBP26.28■■□□□ 1.8
HERC6-205ENST00000504905 NPM2Q86SE8 214 aaKnown RBP26.28■■□□□ 1.8
HERC6-205ENST00000504905 MBIPQ9NS73 344 aa26.28■■□□□ 1.8
HERC6-205ENST00000504905 SRP68Q9UHB9 627 aaKnown RBP26.28■■□□□ 1.8
HERC6-205ENST00000504905 USP42Q9H9J4 1324 aaKnown RBP26.28■■□□□ 1.8
HERC6-205ENST00000504905 A0A087WZG4 1122 aa26.27■■□□□ 1.8
HERC6-205ENST00000504905 ZPR1O75312 459 aa26.27■■□□□ 1.8
HERC6-205ENST00000504905 HSPA6P17066 643 aa26.27■■□□□ 1.8
HERC6-205ENST00000504905 GYS1P13807 737 aa26.26■■□□□ 1.79
HERC6-205ENST00000504905 PIP4K2AP48426 406 aaPredicted RBP26.26■■□□□ 1.79
HERC6-205ENST00000504905 NLGN1Q8N2Q7 840 aa26.26■■□□□ 1.79
HERC6-205ENST00000504905 NGEFQ8N5V2 710 aa26.26■■□□□ 1.79
HERC6-205ENST00000504905 ZNF526Q8TF50 670 aaPredicted RBP26.26■■□□□ 1.79
HERC6-205ENST00000504905 NARFQ9UHQ1 456 aa26.25■■□□□ 1.79
HERC6-205ENST00000504905 KRT24Q2M2I5 525 aa26.23■■□□□ 1.79
HERC6-205ENST00000504905 USPL1Q5W0Q7 1092 aa26.23■■□□□ 1.79
HERC6-205ENST00000504905 IL16Q14005 1332 aa26.22■■□□□ 1.79
HERC6-205ENST00000504905 NBPF26B4DH59 902 aa26.22■■□□□ 1.79
HERC6-205ENST00000504905 EIF2S2P20042 333 aaKnown RBP26.22■■□□□ 1.79
HERC6-205ENST00000504905 NBPF10Q6P3W6 841 aaKnown RBP26.22■■□□□ 1.79
HERC6-205ENST00000504905 NBPF15Q8N660 670 aa26.22■■□□□ 1.79
HERC6-205ENST00000504905 WWC3Q9ULE0 1092 aa26.22■■□□□ 1.79
HERC6-205ENST00000504905 WDR63Q8IWG1 891 aa26.21■■□□□ 1.79
HERC6-205ENST00000504905 SCN7AQ01118 1682 aa26.21■■□□□ 1.79
HERC6-205ENST00000504905 MMP10P09238 476 aa26.2■■□□□ 1.78
HERC6-205ENST00000504905 FKBP8Q14318 412 aa26.2■■□□□ 1.78
HERC6-205ENST00000504905 TBC1D2BQ9UPU7 963 aa26.2■■□□□ 1.78
HERC6-205ENST00000504905 ERBB4Q15303 1308 aa26.19■■□□□ 1.78
HERC6-205ENST00000504905 HOXB7P09629 217 aa26.19■■□□□ 1.78
HERC6-205ENST00000504905 BCORQ6W2J9 1755 aa26.18■■□□□ 1.78
HERC6-205ENST00000504905 KIF3CO14782 793 aa26.18■■□□□ 1.78
HERC6-205ENST00000504905 DUSP27Q5VZP5 1158 aa26.18■■□□□ 1.78
HERC6-205ENST00000504905 DZIP3Q86Y13 1208 aaKnown RBP26.18■■□□□ 1.78
HERC6-205ENST00000504905 KIF13BQ9NQT8 1826 aa26.17■■□□□ 1.78
HERC6-205ENST00000504905 MYL6BP14649 208 aa26.17■■□□□ 1.78
HERC6-205ENST00000504905 NECTIN2Q92692 538 aa26.17■■□□□ 1.78
HERC6-205ENST00000504905 TSR2Q969E8 191 aaKnown RBP26.17■■□□□ 1.78
HERC6-205ENST00000504905 BCL2L12Q9HB09 334 aa26.16■■□□□ 1.78
HERC6-205ENST00000504905 PARP3Q9Y6F1 533 aa26.16■■□□□ 1.78
HERC6-205ENST00000504905 PXDNLA1KZ92 1463 aa26.16■■□□□ 1.78
HERC6-205ENST00000504905 TGFB2P61812 414 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms