RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 RGPD8O14715 1765 aaPredicted RBP11.84□□□□□ -0.51
CSF1R-203ENST00000504875 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.51
CSF1R-203ENST00000504875 DIAPH3Q9NSV4 1193 aa11.83□□□□□ -0.51
CSF1R-203ENST00000504875 SSH2Q76I76 1423 aa11.83□□□□□ -0.52
CSF1R-203ENST00000504875 ATP10DQ9P241 1426 aa11.83□□□□□ -0.52
CSF1R-203ENST00000504875 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
CSF1R-203ENST00000504875 PIP4K2AP48426 406 aaPredicted RBP11.83□□□□□ -0.52
CSF1R-203ENST00000504875 CWF19L2Q2TBE0 894 aaKnown RBP11.83□□□□□ -0.52
CSF1R-203ENST00000504875 GPATCH3Q96I76 525 aa11.83□□□□□ -0.52
CSF1R-203ENST00000504875 NUCB2P80303 420 aa11.82□□□□□ -0.52
CSF1R-203ENST00000504875 RHPN1Q8TCX5 695 aa11.82□□□□□ -0.52
CSF1R-203ENST00000504875 KIF1BPQ96EK5 621 aa11.82□□□□□ -0.52
CSF1R-203ENST00000504875 PEAK1Q9H792 1746 aa11.82□□□□□ -0.52
CSF1R-203ENST00000504875 G3BP1Q13283 466 aaKnown RBP eCLIP11.82□□□□□ -0.52
CSF1R-203ENST00000504875 HSP90AB4PQ58FF6 505 aa11.82□□□□□ -0.52
CSF1R-203ENST00000504875 CWC27Q6UX04 472 aaKnown RBP11.82□□□□□ -0.52
CSF1R-203ENST00000504875 KIF2CQ99661 725 aa11.82□□□□□ -0.52
CSF1R-203ENST00000504875 ARHGAP23Q9P227 1491 aa11.82□□□□□ -0.52
CSF1R-203ENST00000504875 SLIT1O75093 1534 aa11.82□□□□□ -0.52
CSF1R-203ENST00000504875 PRAMEF22A3QJZ6 481 aa11.82□□□□□ -0.52
CSF1R-203ENST00000504875 JARID2Q92833 1246 aaPredicted RBP11.82□□□□□ -0.52
CSF1R-203ENST00000504875 HDAC5Q9UQL6 1122 aa11.82□□□□□ -0.52
CSF1R-203ENST00000504875 RGS12O14924 1447 aa11.81□□□□□ -0.52
CSF1R-203ENST00000504875 CNTROBQ8N137 903 aa11.81□□□□□ -0.52
CSF1R-203ENST00000504875 PANK2Q9BZ23 570 aa11.81□□□□□ -0.52
CSF1R-203ENST00000504875 PA2G4Q9UQ80 394 aaKnown RBP11.81□□□□□ -0.52
CSF1R-203ENST00000504875 ESYT1Q9BSJ8 1104 aa11.81□□□□□ -0.52
CSF1R-203ENST00000504875 ZGPATQ8N5A5 531 aaKnown RBP11.81□□□□□ -0.52
CSF1R-203ENST00000504875 RAB3GAP1Q15042 981 aa11.8□□□□□ -0.52
CSF1R-203ENST00000504875 SKOR2Q2VWA4 1001 aaPredicted RBP11.8□□□□□ -0.52
CSF1R-203ENST00000504875 ARHGEF25Q86VW2 580 aa11.8□□□□□ -0.52
CSF1R-203ENST00000504875 C19orf44Q9H6X5 657 aa11.8□□□□□ -0.52
CSF1R-203ENST00000504875 SOS1Q07889 1333 aaPredicted RBP11.8□□□□□ -0.52
CSF1R-203ENST00000504875 PTMSP20962 102 aa11.8□□□□□ -0.52
CSF1R-203ENST00000504875 PROSER3Q2NL68 480 aa11.8□□□□□ -0.52
CSF1R-203ENST00000504875 BABAM1Q9NWV8 329 aa11.8□□□□□ -0.52
CSF1R-203ENST00000504875 AXIN2Q9Y2T1 843 aa11.8□□□□□ -0.52
CSF1R-203ENST00000504875 RAB11FIP3O75154 756 aa11.8□□□□□ -0.52
CSF1R-203ENST00000504875 AACSQ86V21 672 aa11.8□□□□□ -0.52
CSF1R-203ENST00000504875 LARP6Q9BRS8 491 aaKnown RBP11.8□□□□□ -0.52
CSF1R-203ENST00000504875 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
CSF1R-203ENST00000504875 HSPA2P54652 639 aa11.79□□□□□ -0.52
CSF1R-203ENST00000504875 NFATC2IPQ8NCF5 419 aa11.79□□□□□ -0.52
CSF1R-203ENST00000504875 PRPF40AO75400 957 aaKnown RBP11.79□□□□□ -0.52
CSF1R-203ENST00000504875 CHMLP26374 656 aa11.79□□□□□ -0.52
CSF1R-203ENST00000504875 UNC5CLQ8IV45 518 aa11.79□□□□□ -0.52
CSF1R-203ENST00000504875 NPHP4O75161 1426 aaPredicted RBP11.79□□□□□ -0.52
CSF1R-203ENST00000504875 PDE4CQ08493 712 aa11.79□□□□□ -0.52
CSF1R-203ENST00000504875 CAVIN1Q6NZI2 390 aaKnown RBP11.79□□□□□ -0.52
CSF1R-203ENST00000504875 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
CSF1R-203ENST00000504875 MYD88Q99836 296 aa11.78□□□□□ -0.52
CSF1R-203ENST00000504875 CCDC8Q9H0W5 538 aaPredicted RBP11.78□□□□□ -0.52
CSF1R-203ENST00000504875 BAG4O95429 457 aaKnown RBP11.78□□□□□ -0.52
CSF1R-203ENST00000504875 CABP4P57796 275 aa11.78□□□□□ -0.52
CSF1R-203ENST00000504875 KSR2Q6VAB6 950 aa11.78□□□□□ -0.52
CSF1R-203ENST00000504875 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
CSF1R-203ENST00000504875 FAM13BQ9NYF5 915 aa11.78□□□□□ -0.52
CSF1R-203ENST00000504875 NRKQ7Z2Y5 1582 aa11.77□□□□□ -0.52
CSF1R-203ENST00000504875 STRN4Q9NRL3 753 aa11.77□□□□□ -0.53
CSF1R-203ENST00000504875 IBTKQ9P2D0 1353 aaPredicted RBP11.77□□□□□ -0.53
CSF1R-203ENST00000504875 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
CSF1R-203ENST00000504875 GIGYF1O75420 1035 aaPredicted RBP11.77□□□□□ -0.53
CSF1R-203ENST00000504875 MRE11P49959 708 aa11.77□□□□□ -0.53
CSF1R-203ENST00000504875 BEND3Q5T5X7 828 aa11.77□□□□□ -0.53
CSF1R-203ENST00000504875 TOM1L2Q6ZVM7 507 aa11.77□□□□□ -0.53
CSF1R-203ENST00000504875 SSH3Q8TE77 659 aa11.77□□□□□ -0.53
CSF1R-203ENST00000504875 RUFY2Q8WXA3 655 aa11.77□□□□□ -0.53
CSF1R-203ENST00000504875 PRDM11Q9NQV5 511 aa11.77□□□□□ -0.53
CSF1R-203ENST00000504875 PKP1Q13835 747 aa11.76□□□□□ -0.53
CSF1R-203ENST00000504875 TMX3Q96JJ7 454 aa11.76□□□□□ -0.53
CSF1R-203ENST00000504875 GRPEL1Q9HAV7 217 aa11.76□□□□□ -0.53
CSF1R-203ENST00000504875 CWC22Q9HCG8 908 aaKnown RBP11.76□□□□□ -0.53
CSF1R-203ENST00000504875 XRCC6P12956 609 aaKnown RBP eCLIP11.76□□□□□ -0.53
CSF1R-203ENST00000504875 CLCN1P35523 988 aa11.76□□□□□ -0.53
CSF1R-203ENST00000504875 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
CSF1R-203ENST00000504875 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
CSF1R-203ENST00000504875 PALD1Q9ULE6 856 aa11.76□□□□□ -0.53
CSF1R-203ENST00000504875 PIK3C2AO00443 1686 aa11.76□□□□□ -0.53
CSF1R-203ENST00000504875 ATP5J2-PTCD1G3V325 749 aa11.75□□□□□ -0.53
CSF1R-203ENST00000504875 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
CSF1R-203ENST00000504875 HOXB7P09629 217 aa11.75□□□□□ -0.53
CSF1R-203ENST00000504875 FSD1Q9BTV5 496 aa11.75□□□□□ -0.53
CSF1R-203ENST00000504875 GLRX3O76003 335 aaKnown RBP11.75□□□□□ -0.53
CSF1R-203ENST00000504875 EVA1CP58658 441 aa11.75□□□□□ -0.53
CSF1R-203ENST00000504875 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
CSF1R-203ENST00000504875 BOLA2Q9H3K6 86 aa11.75□□□□□ -0.53
CSF1R-203ENST00000504875 OSBPL3Q9H4L5 887 aa11.75□□□□□ -0.53
CSF1R-203ENST00000504875 GRM8O00222 908 aa11.75□□□□□ -0.53
CSF1R-203ENST00000504875 ERC1Q8IUD2 1116 aa11.75□□□□□ -0.53
CSF1R-203ENST00000504875 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
CSF1R-203ENST00000504875 MCM2P49736 904 aa11.74□□□□□ -0.53
CSF1R-203ENST00000504875 ZNF790Q6PG37 636 aa11.74□□□□□ -0.53
CSF1R-203ENST00000504875 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
CSF1R-203ENST00000504875 CHAMP1Q96JM3 812 aa11.74□□□□□ -0.53
CSF1R-203ENST00000504875 TOPAZ1Q8N9V7 1692 aa11.74□□□□□ -0.53
CSF1R-203ENST00000504875 FGD1P98174 961 aa11.74□□□□□ -0.53
CSF1R-203ENST00000504875 BICC1Q9H694 974 aaKnown RBP11.74□□□□□ -0.53
CSF1R-203ENST00000504875 ECHDC1Q9NTX5 307 aa11.74□□□□□ -0.53
CSF1R-203ENST00000504875 KAT6BQ8WYB5 2073 aa11.74□□□□□ -0.53
CSF1R-203ENST00000504875 ESPNB1AK53 854 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms