RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
DDX41-203ENST00000504781 SNRPA1P09661 255 aaKnown RBP12.88□□□□□ -0.35
DDX41-203ENST00000504781 HDGFL1Q5TGJ6 251 aa12.88□□□□□ -0.35
DDX41-203ENST00000504781 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
DDX41-203ENST00000504781 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
DDX41-203ENST00000504781 FMNL2Q96PY5 1086 aa12.88□□□□□ -0.35
DDX41-203ENST00000504781 DBF4Q9UBU7 674 aaPredicted RBP12.88□□□□□ -0.35
DDX41-203ENST00000504781 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
DDX41-203ENST00000504781 TCERG1O14776 1098 aaKnown RBP12.87□□□□□ -0.35
DDX41-203ENST00000504781 MARCH10Q8NA82 808 aaPredicted RBP12.87□□□□□ -0.35
DDX41-203ENST00000504781 MRC1P22897 1456 aa12.86□□□□□ -0.35
DDX41-203ENST00000504781 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
DDX41-203ENST00000504781 PTF1AQ7RTS3 328 aa12.86□□□□□ -0.35
DDX41-203ENST00000504781 ABCC4O15439 1325 aa12.86□□□□□ -0.35
DDX41-203ENST00000504781 EIF2S2P20042 333 aaKnown RBP12.85□□□□□ -0.35
DDX41-203ENST00000504781 SLC39A6Q13433 755 aa12.85□□□□□ -0.35
DDX41-203ENST00000504781 TMEM57Q8N5G2 664 aa12.85□□□□□ -0.35
DDX41-203ENST00000504781 TEX13AQ9BXU3 409 aaPredicted RBP12.85□□□□□ -0.35
DDX41-203ENST00000504781 DDX21Q9NR30 783 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDX41-203ENST00000504781 ZBTB40Q9NUA8 1239 aa12.85□□□□□ -0.35
DDX41-203ENST00000504781 HYPKQ9NX55 129 aa12.85□□□□□ -0.35
DDX41-203ENST00000504781 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
DDX41-203ENST00000504781 TNNQ9UQP3 1299 aa12.85□□□□□ -0.35
DDX41-203ENST00000504781 CCT4P50991 539 aaKnown RBP12.84□□□□□ -0.35
DDX41-203ENST00000504781 ITPRIPQ8IWB1 547 aa12.84□□□□□ -0.35
DDX41-203ENST00000504781 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
DDX41-203ENST00000504781 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
DDX41-203ENST00000504781 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
DDX41-203ENST00000504781 FLIIQ13045 1269 aa12.83□□□□□ -0.36
DDX41-203ENST00000504781 CENPQQ7L2Z9 268 aaPredicted RBP12.83□□□□□ -0.36
DDX41-203ENST00000504781 G2E3Q7L622 706 aa12.83□□□□□ -0.36
DDX41-203ENST00000504781 RWDD1Q9H446 243 aaPredicted RBP12.83□□□□□ -0.36
DDX41-203ENST00000504781 LRP5O75197 1615 aa12.83□□□□□ -0.36
DDX41-203ENST00000504781 PLSCR1O15162 318 aa12.82□□□□□ -0.36
DDX41-203ENST00000504781 PIGBQ92521 554 aa12.82□□□□□ -0.36
DDX41-203ENST00000504781 ACSBG1Q96GR2 724 aa12.82□□□□□ -0.36
DDX41-203ENST00000504781 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
DDX41-203ENST00000504781 SHANK3Q9BYB0 1731 aa12.82□□□□□ -0.36
DDX41-203ENST00000504781 TNS2Q63HR2 1409 aa12.81□□□□□ -0.36
DDX41-203ENST00000504781 FKBP5Q13451 457 aaPredicted RBP12.81□□□□□ -0.36
DDX41-203ENST00000504781 NECTIN2Q92692 538 aa12.81□□□□□ -0.36
DDX41-203ENST00000504781 CHPF2Q9P2E5 772 aa12.81□□□□□ -0.36
DDX41-203ENST00000504781 PPP1R1BQ9UD71 204 aaPredicted RBP12.81□□□□□ -0.36
DDX41-203ENST00000504781 USP16Q9Y5T5 823 aa12.81□□□□□ -0.36
DDX41-203ENST00000504781 KCNQ2O43526 872 aa12.8□□□□□ -0.36
DDX41-203ENST00000504781 DDX58O95786 925 aaKnown RBP12.8□□□□□ -0.36
DDX41-203ENST00000504781 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
DDX41-203ENST00000504781 PDIA6Q15084 440 aa12.8□□□□□ -0.36
DDX41-203ENST00000504781 PHAXQ9H814 394 aaKnown RBP12.8□□□□□ -0.36
DDX41-203ENST00000504781 ATG3Q9NT62 314 aa12.8□□□□□ -0.36
DDX41-203ENST00000504781 RREB1Q92766 1687 aa12.8□□□□□ -0.36
DDX41-203ENST00000504781 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
DDX41-203ENST00000504781 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
DDX41-203ENST00000504781 KSR2Q6VAB6 950 aa12.79□□□□□ -0.36
DDX41-203ENST00000504781 SPON1Q9HCB6 807 aa12.79□□□□□ -0.36
DDX41-203ENST00000504781 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
DDX41-203ENST00000504781 BCL9O00512 1426 aa12.79□□□□□ -0.36
DDX41-203ENST00000504781 WNK3Q9BYP7 1800 aa12.78□□□□□ -0.36
DDX41-203ENST00000504781 PRAMEF22A3QJZ6 481 aa12.78□□□□□ -0.36
DDX41-203ENST00000504781 TXNRD1Q16881 649 aa12.78□□□□□ -0.36
DDX41-203ENST00000504781 PROM2Q8N271 834 aa12.78□□□□□ -0.36
DDX41-203ENST00000504781 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
DDX41-203ENST00000504781 HDAC5Q9UQL6 1122 aa12.78□□□□□ -0.36
DDX41-203ENST00000504781 KDM2BQ8NHM5 1336 aa12.78□□□□□ -0.36
DDX41-203ENST00000504781 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
DDX41-203ENST00000504781 STARD3NLO95772 234 aa12.77□□□□□ -0.37
DDX41-203ENST00000504781 IGHDP01880 384 aa12.77□□□□□ -0.37
DDX41-203ENST00000504781 GNAI3P08754 354 aa12.77□□□□□ -0.37
DDX41-203ENST00000504781 SLC4A10Q6U841 1118 aa12.77□□□□□ -0.37
DDX41-203ENST00000504781 RPAP2Q8IXW5 612 aaPredicted RBP12.77□□□□□ -0.37
DDX41-203ENST00000504781 DNAAF4Q8WXU2 420 aa12.77□□□□□ -0.37
DDX41-203ENST00000504781 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.37
DDX41-203ENST00000504781 ANO8Q9HCE9 1232 aaPredicted RBP12.77□□□□□ -0.37
DDX41-203ENST00000504781 STK32BQ9NY57 414 aa12.77□□□□□ -0.37
DDX41-203ENST00000504781 ITGB4P16144 1822 aa12.76□□□□□ -0.37
DDX41-203ENST00000504781 PI4KAP2A4QPH2 592 aa12.76□□□□□ -0.37
DDX41-203ENST00000504781 F6X3S4 739 aa12.76□□□□□ -0.37
DDX41-203ENST00000504781 PTCD1O75127 700 aaKnown RBP12.76□□□□□ -0.37
DDX41-203ENST00000504781 PI4KAP1Q8N8J0 262 aa12.76□□□□□ -0.37
DDX41-203ENST00000504781 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
DDX41-203ENST00000504781 ALDH1L1O75891 902 aa12.75□□□□□ -0.37
DDX41-203ENST00000504781 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
DDX41-203ENST00000504781 ANKRD13DQ6ZTN6 518 aa12.75□□□□□ -0.37
DDX41-203ENST00000504781 COPS6Q7L5N1 327 aa12.75□□□□□ -0.37
DDX41-203ENST00000504781 SRCIN1Q9C0H9 1055 aa12.75□□□□□ -0.37
DDX41-203ENST00000504781 PDGFDQ9GZP0 370 aaPredicted RBP12.75□□□□□ -0.37
DDX41-203ENST00000504781 IBTKQ9P2D0 1353 aaPredicted RBP12.75□□□□□ -0.37
DDX41-203ENST00000504781 UBR2Q8IWV8 1755 aa12.74□□□□□ -0.37
DDX41-203ENST00000504781 BEND3Q5T5X7 828 aa12.74□□□□□ -0.37
DDX41-203ENST00000504781 LRP10Q7Z4F1 713 aa12.74□□□□□ -0.37
DDX41-203ENST00000504781 SYTL4Q96C24 671 aaPredicted RBP12.74□□□□□ -0.37
DDX41-203ENST00000504781 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
DDX41-203ENST00000504781 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
DDX41-203ENST00000504781 PXDNLA1KZ92 1463 aa12.73□□□□□ -0.37
DDX41-203ENST00000504781 MYL6BP14649 208 aa12.73□□□□□ -0.37
DDX41-203ENST00000504781 SLC15A2Q16348 729 aa12.73□□□□□ -0.37
DDX41-203ENST00000504781 PROSER3Q2NL68 480 aa12.73□□□□□ -0.37
DDX41-203ENST00000504781 RIC3Q7Z5B4 369 aa12.73□□□□□ -0.37
DDX41-203ENST00000504781 LINS1Q8NG48 757 aa12.73□□□□□ -0.37
DDX41-203ENST00000504781 PLBD2Q8NHP8 589 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms