RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 INTS5Q6P9B9 1019 aaKnown RBP23.59■■□□□ 1.37
DDR1-254ENST00000504679 MYH16Q9H6N6 1097 aa23.59■■□□□ 1.37
DDR1-254ENST00000504679 TJP1Q07157 1748 aa23.59■■□□□ 1.37
DDR1-254ENST00000504679 TSR2Q969E8 191 aaKnown RBP23.58■■□□□ 1.37
DDR1-254ENST00000504679 COL5A3P25940 1745 aaPredicted RBP23.57■■□□□ 1.36
DDR1-254ENST00000504679 CICQ96RK0 1608 aaPredicted RBP23.57■■□□□ 1.36
DDR1-254ENST00000504679 A1BGP04217 495 aa23.56■■□□□ 1.36
DDR1-254ENST00000504679 CANXP27824 592 aaKnown RBP23.56■■□□□ 1.36
DDR1-254ENST00000504679 SSFA2P28290 1259 aa23.56■■□□□ 1.36
DDR1-254ENST00000504679 TRAPPC3LQ5T215 181 aa23.56■■□□□ 1.36
DDR1-254ENST00000504679 MSH5O43196 834 aa23.55■■□□□ 1.36
DDR1-254ENST00000504679 HOXB7P09629 217 aa23.55■■□□□ 1.36
DDR1-254ENST00000504679 KRT24Q2M2I5 525 aa23.55■■□□□ 1.36
DDR1-254ENST00000504679 DUSP27Q5VZP5 1158 aa23.55■■□□□ 1.36
DDR1-254ENST00000504679 CHMP4AQ9BY43 222 aa23.55■■□□□ 1.36
DDR1-254ENST00000504679 SPINK5Q9NQ38 1064 aaPredicted RBP23.55■■□□□ 1.36
DDR1-254ENST00000504679 MYH14Q7Z406 1995 aaKnown RBP23.54■■□□□ 1.36
DDR1-254ENST00000504679 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.54■■□□□ 1.36
DDR1-254ENST00000504679 E9PSI1 815 aa23.54■■□□□ 1.36
DDR1-254ENST00000504679 EIF2S2P20042 333 aaKnown RBP23.54■■□□□ 1.36
DDR1-254ENST00000504679 NPM2Q86SE8 214 aaKnown RBP23.54■■□□□ 1.36
DDR1-254ENST00000504679 ZBTB1Q9Y2K1 713 aa23.54■■□□□ 1.36
DDR1-254ENST00000504679 PNPLA7Q6ZV29 1317 aa23.54■■□□□ 1.36
DDR1-254ENST00000504679 ELL2O00472 640 aaPredicted RBP23.53■■□□□ 1.36
DDR1-254ENST00000504679 PHF14O94880 888 aa23.53■■□□□ 1.36
DDR1-254ENST00000504679 ADRA2BP18089 450 aa23.53■■□□□ 1.36
DDR1-254ENST00000504679 COL23A1Q86Y22 540 aaPredicted RBP23.53■■□□□ 1.36
DDR1-254ENST00000504679 C8orf58Q8NAV2 365 aa23.53■■□□□ 1.36
DDR1-254ENST00000504679 FANCIQ9NVI1 1328 aa23.53■■□□□ 1.36
DDR1-254ENST00000504679 SLFN5Q08AF3 891 aa23.52■■□□□ 1.36
DDR1-254ENST00000504679 SOS1Q07889 1333 aaPredicted RBP23.52■■□□□ 1.36
DDR1-254ENST00000504679 RFC4P35249 363 aa23.51■■□□□ 1.35
DDR1-254ENST00000504679 IL6STP40189 918 aaPredicted RBP23.51■■□□□ 1.35
DDR1-254ENST00000504679 SMIM5Q71RC9 77 aa23.51■■□□□ 1.35
DDR1-254ENST00000504679 SLC16A10Q8TF71 515 aa23.51■■□□□ 1.35
DDR1-254ENST00000504679 ARHGEF1Q92888 912 aaKnown RBP23.51■■□□□ 1.35
DDR1-254ENST00000504679 UBR3Q6ZT12 1888 aa23.5■■□□□ 1.35
DDR1-254ENST00000504679 EIF5P55010 431 aaKnown RBP23.5■■□□□ 1.35
DDR1-254ENST00000504679 AMIGO3Q86WK7 504 aa23.5■■□□□ 1.35
DDR1-254ENST00000504679 A0A087WZG4 1122 aa23.49■■□□□ 1.35
DDR1-254ENST00000504679 EXOSC9Q06265 439 aaKnown RBP23.49■■□□□ 1.35
DDR1-254ENST00000504679 HDGFL1Q5TGJ6 251 aa23.49■■□□□ 1.35
DDR1-254ENST00000504679 CDCA7LQ96GN5 454 aa23.49■■□□□ 1.35
DDR1-254ENST00000504679 PDGFDQ9GZP0 370 aaPredicted RBP23.49■■□□□ 1.35
DDR1-254ENST00000504679 QSER1Q2KHR3 1735 aa23.49■■□□□ 1.35
DDR1-254ENST00000504679 ERBB4Q15303 1308 aa23.49■■□□□ 1.35
DDR1-254ENST00000504679 TWISTNBQ3B726 338 aaPredicted RBP23.48■■□□□ 1.35
DDR1-254ENST00000504679 TSPYL6Q8N831 410 aa23.48■■□□□ 1.35
DDR1-254ENST00000504679 NECTIN2Q92692 538 aa23.48■■□□□ 1.35
DDR1-254ENST00000504679 ZNF330Q9Y3S2 320 aaPredicted RBP23.48■■□□□ 1.35
DDR1-254ENST00000504679 NBPF26B4DH59 902 aa23.47■■□□□ 1.35
DDR1-254ENST00000504679 PIP4K2AP48426 406 aaPredicted RBP23.47■■□□□ 1.35
DDR1-254ENST00000504679 NBPF10Q6P3W6 841 aaKnown RBP23.47■■□□□ 1.35
DDR1-254ENST00000504679 NBPF15Q8N660 670 aa23.47■■□□□ 1.35
DDR1-254ENST00000504679 ARXQ96QS3 562 aa23.47■■□□□ 1.35
DDR1-254ENST00000504679 LAMB4A4D0S4 1761 aa23.46■■□□□ 1.35
DDR1-254ENST00000504679 ZBED9Q6R2W3 1325 aa23.46■■□□□ 1.35
DDR1-254ENST00000504679 TRMT2AQ8IZ69 625 aaKnown RBP23.46■■□□□ 1.35
DDR1-254ENST00000504679 TUBGCP6Q96RT7 1819 aa23.46■■□□□ 1.35
DDR1-254ENST00000504679 ZPR1O75312 459 aa23.45■■□□□ 1.34
DDR1-254ENST00000504679 MYL6BP14649 208 aa23.45■■□□□ 1.34
DDR1-254ENST00000504679 CCDC30Q5VVM6 783 aa23.45■■□□□ 1.34
DDR1-254ENST00000504679 DBF4Q9UBU7 674 aaPredicted RBP23.45■■□□□ 1.34
DDR1-254ENST00000504679 COL15A1P39059 1388 aa23.44■■□□□ 1.34
DDR1-254ENST00000504679 VAMP4O75379 141 aa23.44■■□□□ 1.34
DDR1-254ENST00000504679 DDX21Q9NR30 783 aaKnown RBP eCLIP23.44■■□□□ 1.34
DDR1-254ENST00000504679 ZBTB7AO95365 584 aa23.43■■□□□ 1.34
DDR1-254ENST00000504679 PDIA6Q15084 440 aa23.43■■□□□ 1.34
DDR1-254ENST00000504679 MTFR1LQ9H019 292 aa23.43■■□□□ 1.34
DDR1-254ENST00000504679 NARFQ9UHQ1 456 aa23.43■■□□□ 1.34
DDR1-254ENST00000504679 TBC1D2BQ9UPU7 963 aa23.42■■□□□ 1.34
DDR1-254ENST00000504679 DZIP3Q86Y13 1208 aaKnown RBP23.41■■□□□ 1.34
DDR1-254ENST00000504679 NLGN1Q8N2Q7 840 aa23.41■■□□□ 1.34
DDR1-254ENST00000504679 SPON1Q9HCB6 807 aa23.41■■□□□ 1.34
DDR1-254ENST00000504679 HYPKQ9NX55 129 aa23.41■■□□□ 1.34
DDR1-254ENST00000504679 CHPF2Q9P2E5 772 aa23.41■■□□□ 1.34
DDR1-254ENST00000504679 ATF5Q9Y2D1 282 aaPredicted RBP23.41■■□□□ 1.34
DDR1-254ENST00000504679 STK31Q9BXU1 1019 aa23.4■■□□□ 1.34
DDR1-254ENST00000504679 CASZ1Q86V15 1759 aa23.4■■□□□ 1.34
DDR1-254ENST00000504679 USP42Q9H9J4 1324 aaKnown RBP23.39■■□□□ 1.34
DDR1-254ENST00000504679 ANXA1P04083 346 aa23.39■■□□□ 1.33
DDR1-254ENST00000504679 USPL1Q5W0Q7 1092 aa23.39■■□□□ 1.33
DDR1-254ENST00000504679 SRP68Q9UHB9 627 aaKnown RBP23.39■■□□□ 1.33
DDR1-254ENST00000504679 GYS1P13807 737 aa23.38■■□□□ 1.33
DDR1-254ENST00000504679 PROSER3Q2NL68 480 aa23.38■■□□□ 1.33
DDR1-254ENST00000504679 KIF6Q6ZMV9 814 aa23.37■■□□□ 1.33
DDR1-254ENST00000504679 COPS6Q7L5N1 327 aa23.37■■□□□ 1.33
DDR1-254ENST00000504679 POLD1P28340 1107 aa23.36■■□□□ 1.33
DDR1-254ENST00000504679 AIMP1Q12904 312 aaKnown RBP23.36■■□□□ 1.33
DDR1-254ENST00000504679 LRP10Q7Z4F1 713 aa23.36■■□□□ 1.33
DDR1-254ENST00000504679 TCERG1O14776 1098 aaKnown RBP23.35■■□□□ 1.33
DDR1-254ENST00000504679 SLC4A2P04920 1241 aa23.35■■□□□ 1.33
DDR1-254ENST00000504679 CT47B1P0C2W7 299 aaPredicted RBP23.35■■□□□ 1.33
DDR1-254ENST00000504679 MSL1Q68DK7 614 aa23.35■■□□□ 1.33
DDR1-254ENST00000504679 TTLL7Q6ZT98 887 aa23.35■■□□□ 1.33
DDR1-254ENST00000504679 XAGE3Q8WTP9 111 aa23.35■■□□□ 1.33
DDR1-254ENST00000504679 ZNF428Q96B54 188 aa23.35■■□□□ 1.33
DDR1-254ENST00000504679 ERVV-1B6SEH8 477 aa23.34■■□□□ 1.33
DDR1-254ENST00000504679 CAMTA2O94983 1202 aa23.34■■□□□ 1.33
DDR1-254ENST00000504679 CLEC4GQ6UXB4 293 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms