RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 RAPGEF4Q8WZA2 1011 aa10.21□□□□□ -0.78
CCDC149-204ENST00000504487 MEIS3Q99687 375 aa10.21□□□□□ -0.78
CCDC149-204ENST00000504487 ZNF165P49910 485 aa10.2□□□□□ -0.78
CCDC149-204ENST00000504487 IPO4Q8TEX9 1081 aaKnown RBP10.2□□□□□ -0.78
CCDC149-204ENST00000504487 TSPYL1Q9H0U9 437 aa10.2□□□□□ -0.78
CCDC149-204ENST00000504487 NAA30Q147X3 362 aaPredicted RBP10.2□□□□□ -0.78
CCDC149-204ENST00000504487 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
CCDC149-204ENST00000504487 GNAI2P04899 355 aa10.2□□□□□ -0.78
CCDC149-204ENST00000504487 CEBPZQ03701 1054 aaKnown RBP10.2□□□□□ -0.78
CCDC149-204ENST00000504487 BMS1Q14692 1282 aaKnown RBP10.2□□□□□ -0.78
CCDC149-204ENST00000504487 ANO6Q4KMQ2 910 aa10.2□□□□□ -0.78
CCDC149-204ENST00000504487 GOLGA6L1Q8N7Z2 621 aa10.2□□□□□ -0.78
CCDC149-204ENST00000504487 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
CCDC149-204ENST00000504487 TFIP11Q9UBB9 837 aaKnown RBP10.2□□□□□ -0.78
CCDC149-204ENST00000504487 PHF8Q9UPP1 1060 aa10.2□□□□□ -0.78
CCDC149-204ENST00000504487 F13A1P00488 732 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 HSP90B1P14625 803 aaKnown RBP10.19□□□□□ -0.78
CCDC149-204ENST00000504487 CASTP20810 708 aaKnown RBP10.19□□□□□ -0.78
CCDC149-204ENST00000504487 SYT1P21579 422 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 CHRNA2Q15822 529 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 GTF3C6Q969F1 213 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 SPATA32Q96LK8 384 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 NCBP1Q09161 790 aaKnown RBP10.19□□□□□ -0.78
CCDC149-204ENST00000504487 CEP85Q6P2H3 762 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 SPTLC3Q9NUV7 552 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 PALD1Q9ULE6 856 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 MYO5CQ9NQX4 1742 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 GJB2P29033 226 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 TPM4P67936 248 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 TYRO3Q06418 890 aa10.19□□□□□ -0.78
CCDC149-204ENST00000504487 DDX17Q92841 729 aaKnown RBP10.19□□□□□ -0.78
CCDC149-204ENST00000504487 ANKRD36BQ8N2N9 1353 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 F6X3S4 739 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 FOSBP53539 338 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 ANAPC15P60006 121 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 CWC27Q6UX04 472 aaKnown RBP10.18□□□□□ -0.78
CCDC149-204ENST00000504487 RUFY2Q8WXA3 655 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 UBXN4Q92575 508 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 CWC15Q9P013 229 aaKnown RBP10.18□□□□□ -0.78
CCDC149-204ENST00000504487 VIRMAQ69YN4 1812 aaKnown RBP10.18□□□□□ -0.78
CCDC149-204ENST00000504487 SURF6O75683 361 aaKnown RBP10.18□□□□□ -0.78
CCDC149-204ENST00000504487 TMCO3Q6UWJ1 677 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 JAKMIP1Q96N16 626 aaKnown RBP10.18□□□□□ -0.78
CCDC149-204ENST00000504487 FMNL2Q96PY5 1086 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 SKILP12757 684 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 PDCP20941 246 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 ELF2Q15723 593 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 NUTM1Q86Y26 1132 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 CDC42BPAQ5VT25 1732 aa10.18□□□□□ -0.78
CCDC149-204ENST00000504487 PDRG1Q9NUG6 133 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 TMEM51Q9NW97 253 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 DACT1Q9NYF0 836 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 CYP46A1Q9Y6A2 500 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 IRX3P78415 501 aaPredicted RBP10.17□□□□□ -0.78
CCDC149-204ENST00000504487 NCBP3Q53F19 620 aaKnown RBP10.17□□□□□ -0.78
CCDC149-204ENST00000504487 PHACTR3Q96KR7 559 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 PRDM11Q9NQV5 511 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 PTPRTO14522 1441 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 SMC2O95347 1197 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 SLU7O95391 586 aaKnown RBP10.17□□□□□ -0.78
CCDC149-204ENST00000504487 CCDC73Q6ZRK6 1079 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 CNTROBQ8N137 903 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 DNAJC25Q9H1X3 360 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 CTNNA3Q9UI47 895 aa10.17□□□□□ -0.78
CCDC149-204ENST00000504487 ZNF215Q9UL58 517 aaPredicted RBP10.17□□□□□ -0.78
CCDC149-204ENST00000504487 STK3Q13188 491 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 TERF2Q15554 542 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 RNF20Q5VTR2 975 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 ZNF530Q6P9A1 599 aaPredicted RBP10.16□□□□□ -0.78
CCDC149-204ENST00000504487 FAM177A1Q8N128 213 aaPredicted RBP10.16□□□□□ -0.78
CCDC149-204ENST00000504487 ZFP91Q96JP5 570 aaPredicted RBP10.16□□□□□ -0.78
CCDC149-204ENST00000504487 NRBP1Q9UHY1 535 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 DDX41Q9UJV9 622 aaKnown RBP10.16□□□□□ -0.78
CCDC149-204ENST00000504487 ATP10AO60312 1499 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 GNAI3P08754 354 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 PLXNC1O60486 1568 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 IRX5P78411 483 aaPredicted RBP10.16□□□□□ -0.78
CCDC149-204ENST00000504487 SF3A1Q15459 793 aaKnown RBP10.16□□□□□ -0.78
CCDC149-204ENST00000504487 CERS3Q8IU89 383 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 ANKRD7Q92527 254 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 PLEKHF1Q96S99 279 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 SPG7Q9UQ90 795 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 CCDC171Q6TFL3 1326 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 NSD2O96028 1365 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 ERVK-7P63135 1459 aa10.16□□□□□ -0.78
CCDC149-204ENST00000504487 CHMLP26374 656 aa10.15□□□□□ -0.78
CCDC149-204ENST00000504487 AK2P54819 239 aa10.15□□□□□ -0.78
CCDC149-204ENST00000504487 CUL4AQ13619 759 aa10.15□□□□□ -0.78
CCDC149-204ENST00000504487 KRT24Q2M2I5 525 aa10.15□□□□□ -0.78
CCDC149-204ENST00000504487 TOM1L2Q6ZVM7 507 aa10.15□□□□□ -0.78
CCDC149-204ENST00000504487 TTC5Q8N0Z6 440 aa10.15□□□□□ -0.78
CCDC149-204ENST00000504487 SDF4Q9BRK5 362 aa10.15□□□□□ -0.78
CCDC149-204ENST00000504487 NOM1Q5C9Z4 860 aaKnown RBP10.15□□□□□ -0.78
CCDC149-204ENST00000504487 FAM173BQ6P4H8 233 aa10.15□□□□□ -0.78
CCDC149-204ENST00000504487 MAST1Q9Y2H9 1570 aa10.15□□□□□ -0.78
CCDC149-204ENST00000504487 ABCC1P33527 1531 aa10.15□□□□□ -0.78
CCDC149-204ENST00000504487 KINO60870 393 aaKnown RBP10.15□□□□□ -0.79
CCDC149-204ENST00000504487 CPA1P15085 419 aa10.15□□□□□ -0.79
CCDC149-204ENST00000504487 CCT4P50991 539 aaKnown RBP10.15□□□□□ -0.79
CCDC149-204ENST00000504487 ZSCAN25Q6NSZ9 544 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms