RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
DHFR-202ENST00000504396 POTEGQ6S5H5 508 aa12.64□□□□□ -0.39
DHFR-202ENST00000504396 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
DHFR-202ENST00000504396 KIF24Q5T7B8 1368 aa12.64□□□□□ -0.39
DHFR-202ENST00000504396 GTPBP6O43824 516 aaPredicted RBP12.63□□□□□ -0.39
DHFR-202ENST00000504396 CD2APQ9Y5K6 639 aa12.63□□□□□ -0.39
DHFR-202ENST00000504396 FLT4P35916 1363 aa12.63□□□□□ -0.39
DHFR-202ENST00000504396 FYB1O15117 783 aa12.62□□□□□ -0.39
DHFR-202ENST00000504396 TMF1P82094 1093 aa12.62□□□□□ -0.39
DHFR-202ENST00000504396 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
DHFR-202ENST00000504396 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
DHFR-202ENST00000504396 ITGB4P16144 1822 aa12.62□□□□□ -0.39
DHFR-202ENST00000504396 INSRP06213 1382 aa12.62□□□□□ -0.39
DHFR-202ENST00000504396 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
DHFR-202ENST00000504396 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
DHFR-202ENST00000504396 NSD3Q9BZ95 1437 aa12.61□□□□□ -0.39
DHFR-202ENST00000504396 HOXB3P14651 431 aaPredicted RBP12.61□□□□□ -0.39
DHFR-202ENST00000504396 IFFO2Q5TF58 517 aa12.61□□□□□ -0.39
DHFR-202ENST00000504396 IGSF1Q8N6C5 1336 aa12.6□□□□□ -0.39
DHFR-202ENST00000504396 PKD1L3Q7Z443 1732 aa12.6□□□□□ -0.39
DHFR-202ENST00000504396 C2orf72A6NCS6 295 aa12.6□□□□□ -0.39
DHFR-202ENST00000504396 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
DHFR-202ENST00000504396 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
DHFR-202ENST00000504396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.59□□□□□ -0.39
DHFR-202ENST00000504396 CYP27B1O15528 508 aa12.59□□□□□ -0.39
DHFR-202ENST00000504396 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
DHFR-202ENST00000504396 KIF3CO14782 793 aa12.58□□□□□ -0.4
DHFR-202ENST00000504396 SPG7Q9UQ90 795 aa12.58□□□□□ -0.4
DHFR-202ENST00000504396 EMILIN1Q9Y6C2 1016 aa12.58□□□□□ -0.4
DHFR-202ENST00000504396 GNPATO15228 680 aa12.57□□□□□ -0.4
DHFR-202ENST00000504396 AMIGO3Q86WK7 504 aa12.57□□□□□ -0.4
DHFR-202ENST00000504396 PIGBQ92521 554 aa12.57□□□□□ -0.4
DHFR-202ENST00000504396 TMOD3Q9NYL9 352 aa12.57□□□□□ -0.4
DHFR-202ENST00000504396 ADCY9O60503 1353 aa12.57□□□□□ -0.4
DHFR-202ENST00000504396 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
DHFR-202ENST00000504396 SSFA2P28290 1259 aa12.56□□□□□ -0.4
DHFR-202ENST00000504396 SIK1P57059 783 aa12.56□□□□□ -0.4
DHFR-202ENST00000504396 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
DHFR-202ENST00000504396 TMC2Q8TDI7 906 aa12.56□□□□□ -0.4
DHFR-202ENST00000504396 BBXQ8WY36 941 aaPredicted RBP12.56□□□□□ -0.4
DHFR-202ENST00000504396 ANKRD26Q9UPS8 1709 aa12.56□□□□□ -0.4
DHFR-202ENST00000504396 HSPA6P17066 643 aa12.55□□□□□ -0.4
DHFR-202ENST00000504396 ATP6V1AP38606 617 aa12.55□□□□□ -0.4
DHFR-202ENST00000504396 DOK7Q18PE1 504 aa12.55□□□□□ -0.4
DHFR-202ENST00000504396 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
DHFR-202ENST00000504396 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
DHFR-202ENST00000504396 MARVELD3Q96A59 401 aa12.54□□□□□ -0.4
DHFR-202ENST00000504396 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
DHFR-202ENST00000504396 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
DHFR-202ENST00000504396 MAP2P11137 1827 aaKnown RBP12.53□□□□□ -0.4
DHFR-202ENST00000504396 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
DHFR-202ENST00000504396 MMP10P09238 476 aa12.53□□□□□ -0.4
DHFR-202ENST00000504396 ASAP1Q9ULH1 1129 aa12.53□□□□□ -0.4
DHFR-202ENST00000504396 CICQ96RK0 1608 aaPredicted RBP12.52□□□□□ -0.4
DHFR-202ENST00000504396 N4BP2Q86UW6 1770 aaPredicted RBP12.52□□□□□ -0.41
DHFR-202ENST00000504396 ITPK1Q13572 414 aa12.52□□□□□ -0.41
DHFR-202ENST00000504396 IFNL2Q8IZJ0 200 aa12.52□□□□□ -0.41
DHFR-202ENST00000504396 BCS1LQ9Y276 419 aa12.52□□□□□ -0.41
DHFR-202ENST00000504396 PHKG2P15735 406 aa12.51□□□□□ -0.41
DHFR-202ENST00000504396 TNNT2P45379 298 aaPredicted RBP12.51□□□□□ -0.41
DHFR-202ENST00000504396 EYA1Q99502 592 aa12.51□□□□□ -0.41
DHFR-202ENST00000504396 CARD14Q9BXL6 1004 aa12.51□□□□□ -0.41
DHFR-202ENST00000504396 RTCBQ9Y3I0 505 aaKnown RBP12.5□□□□□ -0.41
DHFR-202ENST00000504396 PXDNLA1KZ92 1463 aa12.5□□□□□ -0.41
DHFR-202ENST00000504396 WASHC2AQ641Q2 1341 aa12.49□□□□□ -0.41
DHFR-202ENST00000504396 ZNF831Q5JPB2 1677 aa12.49□□□□□ -0.41
DHFR-202ENST00000504396 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
DHFR-202ENST00000504396 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
DHFR-202ENST00000504396 A0A0G2JLW4 131 aa12.48□□□□□ -0.41
DHFR-202ENST00000504396 ARHGAP27Q6ZUM4 889 aa12.48□□□□□ -0.41
DHFR-202ENST00000504396 ATG3Q9NT62 314 aa12.48□□□□□ -0.41
DHFR-202ENST00000504396 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
DHFR-202ENST00000504396 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
DHFR-202ENST00000504396 C4AP0C0L4 1744 aa12.47□□□□□ -0.41
DHFR-202ENST00000504396 RFC4P35249 363 aa12.47□□□□□ -0.41
DHFR-202ENST00000504396 EMP3P54852 163 aa12.47□□□□□ -0.41
DHFR-202ENST00000504396 GPHNQ9NQX3 736 aaPredicted RBP12.47□□□□□ -0.41
DHFR-202ENST00000504396 TIMELESSQ9UNS1 1208 aa12.47□□□□□ -0.41
DHFR-202ENST00000504396 PARP3Q9Y6F1 533 aa12.47□□□□□ -0.41
DHFR-202ENST00000504396 KIAA1551Q9HCM1 1747 aa12.47□□□□□ -0.41
DHFR-202ENST00000504396 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.41
DHFR-202ENST00000504396 FCHSD2O94868 740 aa12.46□□□□□ -0.41
DHFR-202ENST00000504396 APLP1P51693 650 aa12.46□□□□□ -0.41
DHFR-202ENST00000504396 TGFB2P61812 414 aa12.46□□□□□ -0.41
DHFR-202ENST00000504396 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.41
DHFR-202ENST00000504396 NLGN1Q8N2Q7 840 aa12.46□□□□□ -0.41
DHFR-202ENST00000504396 POLKQ9UBT6 870 aa12.46□□□□□ -0.41
DHFR-202ENST00000504396 KDRP35968 1356 aa12.46□□□□□ -0.41
DHFR-202ENST00000504396 COL5A3P25940 1745 aaPredicted RBP12.46□□□□□ -0.41
DHFR-202ENST00000504396 HOXB1P14653 301 aaPredicted RBP12.45□□□□□ -0.42
DHFR-202ENST00000504396 DPEP1P16444 411 aa12.45□□□□□ -0.42
DHFR-202ENST00000504396 C16orf71Q8IYS4 520 aaPredicted RBP12.45□□□□□ -0.42
DHFR-202ENST00000504396 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.45□□□□□ -0.42
DHFR-202ENST00000504396 TOMM70O94826 608 aa12.45□□□□□ -0.42
DHFR-202ENST00000504396 HSP90AB1P08238 724 aaKnown RBP12.45□□□□□ -0.42
DHFR-202ENST00000504396 CABP4P57796 275 aa12.45□□□□□ -0.42
DHFR-202ENST00000504396 ZNF530Q6P9A1 599 aaPredicted RBP12.45□□□□□ -0.42
DHFR-202ENST00000504396 ARHGEF1Q92888 912 aaKnown RBP12.45□□□□□ -0.42
DHFR-202ENST00000504396 DCAF5Q96JK2 942 aa12.44□□□□□ -0.42
DHFR-202ENST00000504396 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms