RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
PDLIM7-212ENST00000504380 MYH16Q9H6N6 1097 aa17.21■□□□□ 0.35
PDLIM7-212ENST00000504380 E9PSI1 815 aa17.2■□□□□ 0.34
PDLIM7-212ENST00000504380 A1BGP04217 495 aa17.2■□□□□ 0.34
PDLIM7-212ENST00000504380 EIF2S2P20042 333 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-212ENST00000504380 CRKLP46109 303 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-212ENST00000504380 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
PDLIM7-212ENST00000504380 COL5A3P25940 1745 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-212ENST00000504380 INTS5Q6P9B9 1019 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-212ENST00000504380 AMIGO3Q86WK7 504 aa17.19■□□□□ 0.34
PDLIM7-212ENST00000504380 AKT1S1Q96B36 256 aa17.19■□□□□ 0.34
PDLIM7-212ENST00000504380 MYH14Q7Z406 1995 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-212ENST00000504380 C4BP0C0L5 1744 aa17.18■□□□□ 0.34
PDLIM7-212ENST00000504380 TRMT2AQ8IZ69 625 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-212ENST00000504380 TCERG1O14776 1098 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-212ENST00000504380 GNPATO15228 680 aa17.17■□□□□ 0.34
PDLIM7-212ENST00000504380 STARD3NLO95772 234 aa17.17■□□□□ 0.34
PDLIM7-212ENST00000504380 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-212ENST00000504380 AK7Q96M32 723 aa17.17■□□□□ 0.34
PDLIM7-212ENST00000504380 TEX13AQ9BXU3 409 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-212ENST00000504380 CCDC87Q9NVE4 849 aa17.17■□□□□ 0.34
PDLIM7-212ENST00000504380 STK32BQ9NY57 414 aa17.17■□□□□ 0.34
PDLIM7-212ENST00000504380 ZBTB1Q9Y2K1 713 aa17.17■□□□□ 0.34
PDLIM7-212ENST00000504380 PHF14O94880 888 aa17.16■□□□□ 0.34
PDLIM7-212ENST00000504380 SLC15A2Q16348 729 aa17.16■□□□□ 0.34
PDLIM7-212ENST00000504380 TWISTNBQ3B726 338 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-212ENST00000504380 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
PDLIM7-212ENST00000504380 CICQ96RK0 1608 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-212ENST00000504380 NBPF26B4DH59 902 aa17.15■□□□□ 0.34
PDLIM7-212ENST00000504380 ANXA1P04083 346 aa17.15■□□□□ 0.34
PDLIM7-212ENST00000504380 RC3H1Q5TC82 1133 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-212ENST00000504380 NBPF10Q6P3W6 841 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-212ENST00000504380 NBPF15Q8N660 670 aa17.15■□□□□ 0.34
PDLIM7-212ENST00000504380 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
PDLIM7-212ENST00000504380 CNTNAP4Q9C0A0 1308 aa17.15■□□□□ 0.34
PDLIM7-212ENST00000504380 LAMB4A4D0S4 1761 aa17.15■□□□□ 0.34
PDLIM7-212ENST00000504380 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.34
PDLIM7-212ENST00000504380 VAMP4O75379 141 aa17.14■□□□□ 0.33
PDLIM7-212ENST00000504380 HDGFL1Q5TGJ6 251 aa17.14■□□□□ 0.33
PDLIM7-212ENST00000504380 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-212ENST00000504380 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
PDLIM7-212ENST00000504380 MYL6BP14649 208 aa17.13■□□□□ 0.33
PDLIM7-212ENST00000504380 PROSER3Q2NL68 480 aa17.13■□□□□ 0.33
PDLIM7-212ENST00000504380 PDGFDQ9GZP0 370 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-212ENST00000504380 PDIA6Q15084 440 aa17.12■□□□□ 0.33
PDLIM7-212ENST00000504380 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
PDLIM7-212ENST00000504380 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-212ENST00000504380 UBR3Q6ZT12 1888 aa17.12■□□□□ 0.33
PDLIM7-212ENST00000504380 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-212ENST00000504380 MSH5O43196 834 aa17.11■□□□□ 0.33
PDLIM7-212ENST00000504380 HOXB7P09629 217 aa17.11■□□□□ 0.33
PDLIM7-212ENST00000504380 COL23A1Q86Y22 540 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-212ENST00000504380 SOS1Q07889 1333 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-212ENST00000504380 PNPLA7Q6ZV29 1317 aa17.11■□□□□ 0.33
PDLIM7-212ENST00000504380 ARXQ96QS3 562 aa17.1■□□□□ 0.33
PDLIM7-212ENST00000504380 EIF5P55010 431 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-212ENST00000504380 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-212ENST00000504380 DCAF8L1A6NGE4 600 aa17.08■□□□□ 0.32
PDLIM7-212ENST00000504380 TRAPPC3LQ5T215 181 aa17.08■□□□□ 0.32
PDLIM7-212ENST00000504380 CCDC30Q5VVM6 783 aa17.08■□□□□ 0.32
PDLIM7-212ENST00000504380 SRP68Q9UHB9 627 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-212ENST00000504380 TBC1D2BQ9UPU7 963 aa17.08■□□□□ 0.32
PDLIM7-212ENST00000504380 COL15A1P39059 1388 aa17.07■□□□□ 0.32
PDLIM7-212ENST00000504380 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-212ENST00000504380 SSFA2P28290 1259 aa17.07■□□□□ 0.32
PDLIM7-212ENST00000504380 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-212ENST00000504380 AIMP1Q12904 312 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-212ENST00000504380 TTLL7Q6ZT98 887 aa17.07■□□□□ 0.32
PDLIM7-212ENST00000504380 LRP10Q7Z4F1 713 aa17.07■□□□□ 0.32
PDLIM7-212ENST00000504380 SPON1Q9HCB6 807 aa17.07■□□□□ 0.32
PDLIM7-212ENST00000504380 DDX21Q9NR30 783 aaKnown RBP eCLIP17.07■□□□□ 0.32
PDLIM7-212ENST00000504380 G2E3Q7L622 706 aa17.06■□□□□ 0.32
PDLIM7-212ENST00000504380 BCL2L13Q9BXK5 485 aa17.06■□□□□ 0.32
PDLIM7-212ENST00000504380 PHAXQ9H814 394 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-212ENST00000504380 DBF4Q9UBU7 674 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-212ENST00000504380 ERBB4Q15303 1308 aa17.05■□□□□ 0.32
PDLIM7-212ENST00000504380 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
PDLIM7-212ENST00000504380 RFC4P35249 363 aa17.05■□□□□ 0.32
PDLIM7-212ENST00000504380 DZIP3Q86Y13 1208 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-212ENST00000504380 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
PDLIM7-212ENST00000504380 PPP1R1BQ9UD71 204 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-212ENST00000504380 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
PDLIM7-212ENST00000504380 QSER1Q2KHR3 1735 aa17.04■□□□□ 0.32
PDLIM7-212ENST00000504380 USPL1Q5W0Q7 1092 aa17.04■□□□□ 0.32
PDLIM7-212ENST00000504380 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
PDLIM7-212ENST00000504380 COPS6Q7L5N1 327 aa17.04■□□□□ 0.32
PDLIM7-212ENST00000504380 NPM2Q86SE8 214 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-212ENST00000504380 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
PDLIM7-212ENST00000504380 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
PDLIM7-212ENST00000504380 ZBTB7AO95365 584 aa17.03■□□□□ 0.32
PDLIM7-212ENST00000504380 ADRA2BP18089 450 aa17.03■□□□□ 0.32
PDLIM7-212ENST00000504380 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
PDLIM7-212ENST00000504380 A0A087WZG4 1122 aa17.02■□□□□ 0.32
PDLIM7-212ENST00000504380 CAMTA2O94983 1202 aa17.02■□□□□ 0.32
PDLIM7-212ENST00000504380 IFFO2Q5TF58 517 aa17.02■□□□□ 0.32
PDLIM7-212ENST00000504380 MRPL50Q8N5N7 158 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-212ENST00000504380 ZBTB3Q9H5J0 574 aa17.02■□□□□ 0.32
PDLIM7-212ENST00000504380 BCL2L12Q9HB09 334 aa17.02■□□□□ 0.32
PDLIM7-212ENST00000504380 HYPKQ9NX55 129 aa17.02■□□□□ 0.32
PDLIM7-212ENST00000504380 CASZ1Q86V15 1759 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms