RNA–Protein interactions for RNA: ENST00000504325.5

RACK1-210, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,098 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-210ENST00000504325 NUP188Q5SRE5 1749 aa12.14□□□□□ -0.47
RACK1-210ENST00000504325 FANCIQ9NVI1 1328 aa12.14□□□□□ -0.47
RACK1-210ENST00000504325 GNPATO15228 680 aa12.14□□□□□ -0.47
RACK1-210ENST00000504325 SLFN5Q08AF3 891 aa12.14□□□□□ -0.47
RACK1-210ENST00000504325 KRT24Q2M2I5 525 aa12.14□□□□□ -0.47
RACK1-210ENST00000504325 DUSP27Q5VZP5 1158 aa12.14□□□□□ -0.47
RACK1-210ENST00000504325 CHMP4AQ9BY43 222 aa12.14□□□□□ -0.47
RACK1-210ENST00000504325 SOS1Q07889 1333 aaPredicted RBP12.13□□□□□ -0.47
RACK1-210ENST00000504325 ZBED9Q6R2W3 1325 aa12.13□□□□□ -0.47
RACK1-210ENST00000504325 CICQ96RK0 1608 aaPredicted RBP12.13□□□□□ -0.47
RACK1-210ENST00000504325 ELL2O00472 640 aaPredicted RBP12.13□□□□□ -0.47
RACK1-210ENST00000504325 A1BGP04217 495 aa12.13□□□□□ -0.47
RACK1-210ENST00000504325 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
RACK1-210ENST00000504325 SSFA2P28290 1259 aa12.13□□□□□ -0.47
RACK1-210ENST00000504325 C8orf58Q8NAV2 365 aa12.13□□□□□ -0.47
RACK1-210ENST00000504325 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
RACK1-210ENST00000504325 ZBTB1Q9Y2K1 713 aa12.13□□□□□ -0.47
RACK1-210ENST00000504325 C5P01031 1676 aa12.13□□□□□ -0.47
RACK1-210ENST00000504325 C4BP0C0L5 1744 aa12.12□□□□□ -0.47
RACK1-210ENST00000504325 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.12□□□□□ -0.47
RACK1-210ENST00000504325 PSDA5PKW4 1024 aaPredicted RBP12.12□□□□□ -0.47
RACK1-210ENST00000504325 ADRA2BP18089 450 aa12.12□□□□□ -0.47
RACK1-210ENST00000504325 EIF2S2P20042 333 aaKnown RBP12.12□□□□□ -0.47
RACK1-210ENST00000504325 IL6STP40189 918 aaPredicted RBP12.12□□□□□ -0.47
RACK1-210ENST00000504325 EXOSC9Q06265 439 aaKnown RBP12.12□□□□□ -0.47
RACK1-210ENST00000504325 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
RACK1-210ENST00000504325 NPM2Q86SE8 214 aaKnown RBP12.12□□□□□ -0.47
RACK1-210ENST00000504325 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
RACK1-210ENST00000504325 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
RACK1-210ENST00000504325 TJP1Q07157 1748 aa12.11□□□□□ -0.47
RACK1-210ENST00000504325 TAF1LQ8IZX4 1826 aa12.11□□□□□ -0.47
RACK1-210ENST00000504325 PHF14O94880 888 aa12.11□□□□□ -0.47
RACK1-210ENST00000504325 EIF5P55010 431 aaKnown RBP12.11□□□□□ -0.47
RACK1-210ENST00000504325 TWISTNBQ3B726 338 aaPredicted RBP12.11□□□□□ -0.47
RACK1-210ENST00000504325 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
RACK1-210ENST00000504325 AMIGO3Q86WK7 504 aa12.11□□□□□ -0.47
RACK1-210ENST00000504325 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
RACK1-210ENST00000504325 TRMT2AQ8IZ69 625 aaKnown RBP12.11□□□□□ -0.47
RACK1-210ENST00000504325 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
RACK1-210ENST00000504325 NBPF26B4DH59 902 aa12.1□□□□□ -0.47
RACK1-210ENST00000504325 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
RACK1-210ENST00000504325 NBPF15Q8N660 670 aa12.1□□□□□ -0.47
RACK1-210ENST00000504325 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
RACK1-210ENST00000504325 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
RACK1-210ENST00000504325 COL5A3P25940 1745 aaPredicted RBP12.09□□□□□ -0.47
RACK1-210ENST00000504325 A0A087WZG4 1122 aa12.09□□□□□ -0.47
RACK1-210ENST00000504325 MSH5O43196 834 aa12.09□□□□□ -0.47
RACK1-210ENST00000504325 VAMP4O75379 141 aa12.09□□□□□ -0.47
RACK1-210ENST00000504325 RFC4P35249 363 aa12.09□□□□□ -0.47
RACK1-210ENST00000504325 PIP4K2AP48426 406 aaPredicted RBP12.09□□□□□ -0.47
RACK1-210ENST00000504325 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
RACK1-210ENST00000504325 SMIM5Q71RC9 77 aa12.09□□□□□ -0.47
RACK1-210ENST00000504325 NECTIN2Q92692 538 aa12.09□□□□□ -0.47
RACK1-210ENST00000504325 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
RACK1-210ENST00000504325 DBF4Q9UBU7 674 aaPredicted RBP12.09□□□□□ -0.47
RACK1-210ENST00000504325 ZNF330Q9Y3S2 320 aaPredicted RBP12.09□□□□□ -0.47
RACK1-210ENST00000504325 MYL6BP14649 208 aa12.08□□□□□ -0.48
RACK1-210ENST00000504325 PDIA6Q15084 440 aa12.08□□□□□ -0.48
RACK1-210ENST00000504325 PDGFDQ9GZP0 370 aaPredicted RBP12.08□□□□□ -0.48
RACK1-210ENST00000504325 MYH14Q7Z406 1995 aaKnown RBP12.08□□□□□ -0.48
RACK1-210ENST00000504325 COL15A1P39059 1388 aa12.07□□□□□ -0.48
RACK1-210ENST00000504325 ZPR1O75312 459 aa12.07□□□□□ -0.48
RACK1-210ENST00000504325 HYPKQ9NX55 129 aa12.07□□□□□ -0.48
RACK1-210ENST00000504325 CHPF2Q9P2E5 772 aa12.07□□□□□ -0.48
RACK1-210ENST00000504325 NARFQ9UHQ1 456 aa12.07□□□□□ -0.48
RACK1-210ENST00000504325 CT47B1P0C2W7 299 aaPredicted RBP12.06□□□□□ -0.48
RACK1-210ENST00000504325 PROSER3Q2NL68 480 aa12.06□□□□□ -0.48
RACK1-210ENST00000504325 LRP10Q7Z4F1 713 aa12.06□□□□□ -0.48
RACK1-210ENST00000504325 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
RACK1-210ENST00000504325 ZNF428Q96B54 188 aa12.06□□□□□ -0.48
RACK1-210ENST00000504325 ARXQ96QS3 562 aa12.06□□□□□ -0.48
RACK1-210ENST00000504325 STK31Q9BXU1 1019 aa12.06□□□□□ -0.48
RACK1-210ENST00000504325 MTFR1LQ9H019 292 aa12.06□□□□□ -0.48
RACK1-210ENST00000504325 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
RACK1-210ENST00000504325 USP42Q9H9J4 1324 aaKnown RBP12.06□□□□□ -0.48
RACK1-210ENST00000504325 ANXA1P04083 346 aa12.05□□□□□ -0.48
RACK1-210ENST00000504325 NLGN1Q8N2Q7 840 aa12.05□□□□□ -0.48
RACK1-210ENST00000504325 YTHDC1Q96MU7 727 aaKnown RBP12.05□□□□□ -0.48
RACK1-210ENST00000504325 UBR3Q6ZT12 1888 aa12.05□□□□□ -0.48
RACK1-210ENST00000504325 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
RACK1-210ENST00000504325 RGL2O15211 777 aa12.04□□□□□ -0.48
RACK1-210ENST00000504325 ZBTB7AO95365 584 aa12.04□□□□□ -0.48
RACK1-210ENST00000504325 SLC4A2P04920 1241 aa12.04□□□□□ -0.48
RACK1-210ENST00000504325 GYS1P13807 737 aa12.04□□□□□ -0.48
RACK1-210ENST00000504325 USPL1Q5W0Q7 1092 aa12.04□□□□□ -0.48
RACK1-210ENST00000504325 KIF6Q6ZMV9 814 aa12.04□□□□□ -0.48
RACK1-210ENST00000504325 COPS6Q7L5N1 327 aa12.04□□□□□ -0.48
RACK1-210ENST00000504325 XAGE3Q8WTP9 111 aa12.04□□□□□ -0.48
RACK1-210ENST00000504325 SPON1Q9HCB6 807 aa12.04□□□□□ -0.48
RACK1-210ENST00000504325 SRP68Q9UHB9 627 aaKnown RBP12.04□□□□□ -0.48
RACK1-210ENST00000504325 QSER1Q2KHR3 1735 aa12.03□□□□□ -0.48
RACK1-210ENST00000504325 ERVV-1B6SEH8 477 aa12.03□□□□□ -0.48
RACK1-210ENST00000504325 TCERG1O14776 1098 aaKnown RBP12.03□□□□□ -0.48
RACK1-210ENST00000504325 CAMTA2O94983 1202 aa12.03□□□□□ -0.48
RACK1-210ENST00000504325 AIMP1Q12904 312 aaKnown RBP12.03□□□□□ -0.48
RACK1-210ENST00000504325 CLEC4GQ6UXB4 293 aa12.03□□□□□ -0.48
RACK1-210ENST00000504325 TTLL7Q6ZT98 887 aa12.03□□□□□ -0.48
RACK1-210ENST00000504325 ATF5Q9Y2D1 282 aaPredicted RBP12.03□□□□□ -0.48
RACK1-210ENST00000504325 FKBP8Q14318 412 aa12.02□□□□□ -0.49
RACK1-210ENST00000504325 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms