RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 PCDH11XQ9BZA7 1347 aa12.12□□□□□ -0.47
COL1A1-210ENST00000504289 PCDH11YQ9BZA8 1340 aa12.12□□□□□ -0.47
COL1A1-210ENST00000504289 PI4KAP2A4QPH2 592 aa12.12□□□□□ -0.47
COL1A1-210ENST00000504289 KCNQ3O43525 872 aa12.12□□□□□ -0.47
COL1A1-210ENST00000504289 POLA2Q14181 598 aa12.12□□□□□ -0.47
COL1A1-210ENST00000504289 PI4KAP1Q8N8J0 262 aa12.12□□□□□ -0.47
COL1A1-210ENST00000504289 LRRCC1Q9C099 1032 aa12.12□□□□□ -0.47
COL1A1-210ENST00000504289 UTYO14607 1347 aa12.11□□□□□ -0.47
COL1A1-210ENST00000504289 COL5A2P05997 1499 aaPredicted RBP12.11□□□□□ -0.47
COL1A1-210ENST00000504289 ADCY9O60503 1353 aa12.11□□□□□ -0.47
COL1A1-210ENST00000504289 CYP27B1O15528 508 aa12.11□□□□□ -0.47
COL1A1-210ENST00000504289 SNRPA1P09661 255 aaKnown RBP12.11□□□□□ -0.47
COL1A1-210ENST00000504289 LINS1Q8NG48 757 aa12.11□□□□□ -0.47
COL1A1-210ENST00000504289 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
COL1A1-210ENST00000504289 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
COL1A1-210ENST00000504289 SNX21Q969T3 373 aa12.11□□□□□ -0.47
COL1A1-210ENST00000504289 FMNL2Q96PY5 1086 aa12.11□□□□□ -0.47
COL1A1-210ENST00000504289 STAP2Q9UGK3 403 aa12.11□□□□□ -0.47
COL1A1-210ENST00000504289 EPB41L2O43491 1005 aaKnown RBP12.1□□□□□ -0.47
COL1A1-210ENST00000504289 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
COL1A1-210ENST00000504289 CHRNA2Q15822 529 aa12.1□□□□□ -0.47
COL1A1-210ENST00000504289 RTL5Q5HYW3 569 aaPredicted RBP12.1□□□□□ -0.47
COL1A1-210ENST00000504289 LARP1Q6PKG0 1096 aaKnown RBP12.1□□□□□ -0.47
COL1A1-210ENST00000504289 TBC1D9Q6ZT07 1266 aa12.1□□□□□ -0.47
COL1A1-210ENST00000504289 TTC5Q8N0Z6 440 aa12.1□□□□□ -0.47
COL1A1-210ENST00000504289 ZCRB1Q8TBF4 217 aaKnown RBP12.1□□□□□ -0.47
COL1A1-210ENST00000504289 LRRFIP2Q9Y608 721 aaKnown RBP12.1□□□□□ -0.47
COL1A1-210ENST00000504289 ABCA3Q99758 1704 aa12.1□□□□□ -0.47
COL1A1-210ENST00000504289 SALL3Q9BXA9 1300 aa12.1□□□□□ -0.47
COL1A1-210ENST00000504289 GSPT1P15170 499 aaKnown RBP12.09□□□□□ -0.47
COL1A1-210ENST00000504289 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
COL1A1-210ENST00000504289 COL15A1P39059 1388 aa12.08□□□□□ -0.48
COL1A1-210ENST00000504289 IL2RBP14784 551 aa12.08□□□□□ -0.48
COL1A1-210ENST00000504289 PDE1AP54750 535 aa12.08□□□□□ -0.48
COL1A1-210ENST00000504289 CABP4P57796 275 aa12.08□□□□□ -0.48
COL1A1-210ENST00000504289 PDIA6Q15084 440 aa12.08□□□□□ -0.48
COL1A1-210ENST00000504289 TOM1L2Q6ZVM7 507 aa12.08□□□□□ -0.48
COL1A1-210ENST00000504289 ERC1Q8IUD2 1116 aa12.08□□□□□ -0.48
COL1A1-210ENST00000504289 KIF1BPQ96EK5 621 aa12.08□□□□□ -0.48
COL1A1-210ENST00000504289 PNMA6EA0A0J9YXQ4 647 aa12.07□□□□□ -0.48
COL1A1-210ENST00000504289 REC8O95072 547 aa12.07□□□□□ -0.48
COL1A1-210ENST00000504289 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
COL1A1-210ENST00000504289 PPP1R42Q7Z4L9 355 aa12.07□□□□□ -0.48
COL1A1-210ENST00000504289 MAP3K2Q9Y2U5 619 aa12.07□□□□□ -0.48
COL1A1-210ENST00000504289 UBAP1LF5GYI3 381 aa12.06□□□□□ -0.48
COL1A1-210ENST00000504289 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
COL1A1-210ENST00000504289 SDSP20132 328 aa12.06□□□□□ -0.48
COL1A1-210ENST00000504289 MX1P20591 662 aa12.06□□□□□ -0.48
COL1A1-210ENST00000504289 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-210ENST00000504289 TBC1D2Q9BYX2 928 aa12.06□□□□□ -0.48
COL1A1-210ENST00000504289 C9orf78Q9NZ63 289 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-210ENST00000504289 AHDC1Q5TGY3 1603 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-210ENST00000504289 GRM8O00222 908 aa12.05□□□□□ -0.48
COL1A1-210ENST00000504289 SRGAP3O43295 1099 aa12.05□□□□□ -0.48
COL1A1-210ENST00000504289 HSCBQ8IWL3 235 aa12.05□□□□□ -0.48
COL1A1-210ENST00000504289 C16orf71Q8IYS4 520 aaPredicted RBP12.05□□□□□ -0.48
COL1A1-210ENST00000504289 EXOC6BQ9Y2D4 811 aa12.05□□□□□ -0.48
COL1A1-210ENST00000504289 USP42Q9H9J4 1324 aaKnown RBP12.05□□□□□ -0.48
COL1A1-210ENST00000504289 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
COL1A1-210ENST00000504289 COL22A1Q8NFW1 1626 aaPredicted RBP12.04□□□□□ -0.48
COL1A1-210ENST00000504289 NBPF7P0C2Y1 421 aaPredicted RBP12.04□□□□□ -0.48
COL1A1-210ENST00000504289 EVA1CP58658 441 aa12.04□□□□□ -0.48
COL1A1-210ENST00000504289 LRP10Q7Z4F1 713 aa12.04□□□□□ -0.48
COL1A1-210ENST00000504289 METTL22Q9BUU2 404 aaPredicted RBP12.04□□□□□ -0.48
COL1A1-210ENST00000504289 TEX13AQ9BXU3 409 aaPredicted RBP12.04□□□□□ -0.48
COL1A1-210ENST00000504289 COL14A1Q05707 1796 aaKnown RBP12.03□□□□□ -0.48
COL1A1-210ENST00000504289 UBR2Q8IWV8 1755 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 ERC2O15083 957 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 SMARCA5O60264 1052 aaPredicted RBP12.03□□□□□ -0.48
COL1A1-210ENST00000504289 SURF6O75683 361 aaKnown RBP12.03□□□□□ -0.48
COL1A1-210ENST00000504289 SLC4A3P48751 1232 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 RABEP1Q15276 862 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 PROSER3Q2NL68 480 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 ANKRD13DQ6ZTN6 518 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 RIC3Q7Z5B4 369 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 RHPN1Q8TCX5 695 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 ANTXR1Q9H6X2 564 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
COL1A1-210ENST00000504289 TTC41PQ6P2S7 1318 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 TNS2Q63HR2 1409 aa12.03□□□□□ -0.48
COL1A1-210ENST00000504289 PAPPAQ13219 1627 aa12.02□□□□□ -0.49
COL1A1-210ENST00000504289 SLC39A6Q13433 755 aa12.02□□□□□ -0.49
COL1A1-210ENST00000504289 VSIG10Q8N0Z9 540 aa12.02□□□□□ -0.49
COL1A1-210ENST00000504289 PLBD2Q8NHP8 589 aa12.02□□□□□ -0.49
COL1A1-210ENST00000504289 OTUD7AQ8TE49 926 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-210ENST00000504289 CDCA7Q9BWT1 371 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-210ENST00000504289 USP26Q9BXU7 913 aa12.02□□□□□ -0.49
COL1A1-210ENST00000504289 C5P01031 1676 aa12.02□□□□□ -0.49
COL1A1-210ENST00000504289 NEURL1BA8MQ27 555 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 ANXA1P04083 346 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 HSPA1LP34931 641 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 GCKRQ14397 625 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 COPS6Q7L5N1 327 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 XAGE3Q8WTP9 111 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 IL17RAQ96F46 866 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 GPATCH3Q96I76 525 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 KIF2CQ99661 725 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 CHMP5Q9NZZ3 219 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 TUBGCP6Q96RT7 1819 aa12.01□□□□□ -0.49
COL1A1-210ENST00000504289 GLI3P10071 1580 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms