RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
PGGT1B-204ENST00000503638 KCPQ6ZWJ8 1503 aa17.41■□□□□ 0.38
PGGT1B-204ENST00000503638 DNAJC10Q8IXB1 793 aa17.4■□□□□ 0.38
PGGT1B-204ENST00000503638 LINC00116Q8NCU8 138 aa17.4■□□□□ 0.38
PGGT1B-204ENST00000503638 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
PGGT1B-204ENST00000503638 TFCP2L1Q9NZI6 479 aa17.4■□□□□ 0.38
PGGT1B-204ENST00000503638 HEG1Q9ULI3 1381 aa17.4■□□□□ 0.38
PGGT1B-204ENST00000503638 C5P01031 1676 aa17.39■□□□□ 0.37
PGGT1B-204ENST00000503638 ZNF827Q17R98 1081 aa17.39■□□□□ 0.37
PGGT1B-204ENST00000503638 SLC4A9Q96Q91 983 aa17.39■□□□□ 0.37
PGGT1B-204ENST00000503638 BABAM1Q9NWV8 329 aa17.39■□□□□ 0.37
PGGT1B-204ENST00000503638 CHL1O00533 1208 aa17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 GNPATO15228 680 aa17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 PHF14O94880 888 aa17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 STARD3NLO95772 234 aa17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 SNRPA1P09661 255 aaKnown RBP17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 WDR63Q8IWG1 891 aa17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 VSIG10Q8N0Z9 540 aa17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 TSR2Q969E8 191 aaKnown RBP17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
PGGT1B-204ENST00000503638 EIF4A1P60842 406 aaKnown RBP17.37■□□□□ 0.37
PGGT1B-204ENST00000503638 TEX13AQ9BXU3 409 aaPredicted RBP17.37■□□□□ 0.37
PGGT1B-204ENST00000503638 ZNF330Q9Y3S2 320 aaPredicted RBP17.37■□□□□ 0.37
PGGT1B-204ENST00000503638 CRKLP46109 303 aaKnown RBP17.36■□□□□ 0.37
PGGT1B-204ENST00000503638 ARXQ96QS3 562 aa17.36■□□□□ 0.37
PGGT1B-204ENST00000503638 MYH16Q9H6N6 1097 aa17.36■□□□□ 0.37
PGGT1B-204ENST00000503638 IL16Q14005 1332 aa17.36■□□□□ 0.37
PGGT1B-204ENST00000503638 C4BP0C0L5 1744 aa17.35■□□□□ 0.37
PGGT1B-204ENST00000503638 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
PGGT1B-204ENST00000503638 GOLGA2Q08379 1002 aa17.35■□□□□ 0.37
PGGT1B-204ENST00000503638 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
PGGT1B-204ENST00000503638 TJP1Q07157 1748 aa17.35■□□□□ 0.37
PGGT1B-204ENST00000503638 ELL2O00472 640 aaPredicted RBP17.34■□□□□ 0.37
PGGT1B-204ENST00000503638 EIF2S2P20042 333 aaKnown RBP17.34■□□□□ 0.37
PGGT1B-204ENST00000503638 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
PGGT1B-204ENST00000503638 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
PGGT1B-204ENST00000503638 AKT1S1Q96B36 256 aa17.34■□□□□ 0.37
PGGT1B-204ENST00000503638 YTHDC1Q96MU7 727 aaKnown RBP17.34■□□□□ 0.37
PGGT1B-204ENST00000503638 CCDC87Q9NVE4 849 aa17.34■□□□□ 0.37
PGGT1B-204ENST00000503638 TAF1LQ8IZX4 1826 aa17.33■□□□□ 0.37
PGGT1B-204ENST00000503638 CNTNAP4Q9C0A0 1308 aa17.33■□□□□ 0.36
PGGT1B-204ENST00000503638 FANCIQ9NVI1 1328 aa17.33■□□□□ 0.36
PGGT1B-204ENST00000503638 GIGYF1O75420 1035 aaPredicted RBP17.33■□□□□ 0.36
PGGT1B-204ENST00000503638 ZNF853P0CG23 659 aa17.33■□□□□ 0.36
PGGT1B-204ENST00000503638 CYP19A1P11511 503 aaPredicted RBP17.33■□□□□ 0.36
PGGT1B-204ENST00000503638 KRT24Q2M2I5 525 aa17.33■□□□□ 0.36
PGGT1B-204ENST00000503638 RTCBQ9Y3I0 505 aaKnown RBP17.33■□□□□ 0.36
PGGT1B-204ENST00000503638 ZNF831Q5JPB2 1677 aa17.32■□□□□ 0.36
PGGT1B-204ENST00000503638 USP16Q9Y5T5 823 aa17.32■□□□□ 0.36
PGGT1B-204ENST00000503638 COL5A3P25940 1745 aaPredicted RBP17.31■□□□□ 0.36
PGGT1B-204ENST00000503638 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
PGGT1B-204ENST00000503638 DUSP27Q5VZP5 1158 aa17.31■□□□□ 0.36
PGGT1B-204ENST00000503638 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
PGGT1B-204ENST00000503638 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
PGGT1B-204ENST00000503638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.3■□□□□ 0.36
PGGT1B-204ENST00000503638 E9PSI1 815 aa17.3■□□□□ 0.36
PGGT1B-204ENST00000503638 ABCB7O75027 752 aa17.3■□□□□ 0.36
PGGT1B-204ENST00000503638 A1BGP04217 495 aa17.3■□□□□ 0.36
PGGT1B-204ENST00000503638 RC3H1Q5TC82 1133 aaKnown RBP17.3■□□□□ 0.36
PGGT1B-204ENST00000503638 HDGFL1Q5TGJ6 251 aa17.3■□□□□ 0.36
PGGT1B-204ENST00000503638 INTS5Q6P9B9 1019 aaKnown RBP17.3■□□□□ 0.36
PGGT1B-204ENST00000503638 ZBTB1Q9Y2K1 713 aa17.3■□□□□ 0.36
PGGT1B-204ENST00000503638 TRAPPC3LQ5T215 181 aa17.29■□□□□ 0.36
PGGT1B-204ENST00000503638 C8orf58Q8NAV2 365 aa17.29■□□□□ 0.36
PGGT1B-204ENST00000503638 FLAD1Q8NFF5 587 aa17.29■□□□□ 0.36
PGGT1B-204ENST00000503638 PNPLA7Q6ZV29 1317 aa17.28■□□□□ 0.36
PGGT1B-204ENST00000503638 GOLGB1Q14789 3259 aaKnown RBP17.28■□□□□ 0.36
PGGT1B-204ENST00000503638 RPS6KA4O75676 772 aa17.28■□□□□ 0.36
PGGT1B-204ENST00000503638 MYL6BP14649 208 aa17.28■□□□□ 0.36
PGGT1B-204ENST00000503638 SSFA2P28290 1259 aa17.28■□□□□ 0.36
PGGT1B-204ENST00000503638 RFC4P35249 363 aa17.28■□□□□ 0.36
PGGT1B-204ENST00000503638 EXOSC9Q06265 439 aaKnown RBP17.28■□□□□ 0.36
PGGT1B-204ENST00000503638 CDCA7LQ96GN5 454 aa17.28■□□□□ 0.36
PGGT1B-204ENST00000503638 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
PGGT1B-204ENST00000503638 LAMB4A4D0S4 1761 aa17.28■□□□□ 0.36
PGGT1B-204ENST00000503638 C1QTNF8P60827 252 aa17.27■□□□□ 0.36
PGGT1B-204ENST00000503638 TWISTNBQ3B726 338 aaPredicted RBP17.27■□□□□ 0.36
PGGT1B-204ENST00000503638 GPR162Q16538 588 aa17.26■□□□□ 0.35
PGGT1B-204ENST00000503638 AMIGO3Q86WK7 504 aa17.26■□□□□ 0.35
PGGT1B-204ENST00000503638 COL23A1Q86Y22 540 aaPredicted RBP17.26■□□□□ 0.35
PGGT1B-204ENST00000503638 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
PGGT1B-204ENST00000503638 COL15A1P39059 1388 aa17.26■□□□□ 0.35
PGGT1B-204ENST00000503638 SOS1Q07889 1333 aaPredicted RBP17.25■□□□□ 0.35
PGGT1B-204ENST00000503638 ZBED9Q6R2W3 1325 aa17.25■□□□□ 0.35
PGGT1B-204ENST00000503638 ZPR1O75312 459 aa17.25■□□□□ 0.35
PGGT1B-204ENST00000503638 HOXB7P09629 217 aa17.25■□□□□ 0.35
PGGT1B-204ENST00000503638 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
PGGT1B-204ENST00000503638 TSPYL6Q8N831 410 aa17.25■□□□□ 0.35
PGGT1B-204ENST00000503638 TUBGCP6Q96RT7 1819 aa17.25■□□□□ 0.35
PGGT1B-204ENST00000503638 CHD4Q14839 1912 aa17.25■□□□□ 0.35
PGGT1B-204ENST00000503638 A0A087WZG4 1122 aa17.24■□□□□ 0.35
PGGT1B-204ENST00000503638 TCERG1O14776 1098 aaKnown RBP17.24■□□□□ 0.35
PGGT1B-204ENST00000503638 IL6STP40189 918 aaPredicted RBP17.24■□□□□ 0.35
PGGT1B-204ENST00000503638 MSL1Q68DK7 614 aa17.24■□□□□ 0.35
PGGT1B-204ENST00000503638 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
PGGT1B-204ENST00000503638 NLGN2Q8NFZ4 835 aa17.24■□□□□ 0.35
PGGT1B-204ENST00000503638 ARHGEF1Q92888 912 aaKnown RBP17.24■□□□□ 0.35
PGGT1B-204ENST00000503638 CHMP4AQ9BY43 222 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms