RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 SOS1Q07889 1333 aaPredicted RBP29.09■■■□□ 2.25
CCHCR1-217ENST00000503420 KCNQ3O43525 872 aa29.08■■■□□ 2.25
CCHCR1-217ENST00000503420 SRP68Q9UHB9 627 aaKnown RBP29.08■■■□□ 2.25
CCHCR1-217ENST00000503420 YY1P25490 414 aa29.07■■■□□ 2.24
CCHCR1-217ENST00000503420 PNISRQ8TF01 805 aaKnown RBP29.07■■■□□ 2.24
CCHCR1-217ENST00000503420 CICQ96RK0 1608 aaPredicted RBP29.07■■■□□ 2.24
CCHCR1-217ENST00000503420 USP42Q9H9J4 1324 aaKnown RBP29.07■■■□□ 2.24
CCHCR1-217ENST00000503420 A0A087WZG4 1122 aa29.05■■■□□ 2.24
CCHCR1-217ENST00000503420 SNRPA1P09661 255 aaKnown RBP29.04■■■□□ 2.24
CCHCR1-217ENST00000503420 RIPK4P57078 832 aa29.04■■■□□ 2.24
CCHCR1-217ENST00000503420 FKBP8Q14318 412 aa29.03■■■□□ 2.24
CCHCR1-217ENST00000503420 USPL1Q5W0Q7 1092 aa29.03■■■□□ 2.24
CCHCR1-217ENST00000503420 NARFQ9UHQ1 456 aa29.03■■■□□ 2.24
CCHCR1-217ENST00000503420 ZNF330Q9Y3S2 320 aaPredicted RBP29.03■■■□□ 2.24
CCHCR1-217ENST00000503420 SIPA1L3O60292 1781 aaPredicted RBP29.03■■■□□ 2.24
CCHCR1-217ENST00000503420 UBR2Q8IWV8 1755 aa29.03■■■□□ 2.24
CCHCR1-217ENST00000503420 COL15A1P39059 1388 aa29.02■■■□□ 2.24
CCHCR1-217ENST00000503420 LMOD3Q0VAK6 560 aa29.02■■■□□ 2.24
CCHCR1-217ENST00000503420 MIS18AQ9NYP9 233 aa29.02■■■□□ 2.24
CCHCR1-217ENST00000503420 GRIN3BO60391 1043 aa29.01■■■□□ 2.23
CCHCR1-217ENST00000503420 EIF5P55010 431 aaKnown RBP29■■■□□ 2.23
CCHCR1-217ENST00000503420 CCDC146Q8IYE0 955 aa29■■■□□ 2.23
CCHCR1-217ENST00000503420 A1BGP04217 495 aa28.99■■■□□ 2.23
CCHCR1-217ENST00000503420 IL6STP40189 918 aaPredicted RBP28.99■■■□□ 2.23
CCHCR1-217ENST00000503420 TMPOP42166 694 aaKnown RBP28.99■■■□□ 2.23
CCHCR1-217ENST00000503420 RUNDC1Q96C34 613 aa28.99■■■□□ 2.23
CCHCR1-217ENST00000503420 THUMPD2Q9BTF0 503 aaKnown RBP28.99■■■□□ 2.23
CCHCR1-217ENST00000503420 ADAMTS8Q9UP79 889 aa28.99■■■□□ 2.23
CCHCR1-217ENST00000503420 USP16Q9Y5T5 823 aa28.98■■■□□ 2.23
CCHCR1-217ENST00000503420 TGFB2P61812 414 aa28.96■■■□□ 2.23
CCHCR1-217ENST00000503420 NEUROD2Q15784 382 aa28.96■■■□□ 2.23
CCHCR1-217ENST00000503420 C4AP0C0L4 1744 aa28.95■■■□□ 2.23
CCHCR1-217ENST00000503420 TM4SF1P30408 202 aa28.94■■■□□ 2.22
CCHCR1-217ENST00000503420 RRP7AQ9Y3A4 280 aaKnown RBP28.94■■■□□ 2.22
CCHCR1-217ENST00000503420 PRAMEF22A3QJZ6 481 aa28.93■■■□□ 2.22
CCHCR1-217ENST00000503420 YBX3P16989 372 aaKnown RBP eCLIP28.93■■■□□ 2.22
CCHCR1-217ENST00000503420 TBC1D2BQ9UPU7 963 aa28.93■■■□□ 2.22
CCHCR1-217ENST00000503420 DLG5Q8TDM6 1919 aa28.92■■■□□ 2.22
CCHCR1-217ENST00000503420 ANP32CO43423 234 aa28.92■■■□□ 2.22
CCHCR1-217ENST00000503420 DDR1Q08345 913 aa28.92■■■□□ 2.22
CCHCR1-217ENST00000503420 TSPYL4Q9UJ04 414 aa28.92■■■□□ 2.22
CCHCR1-217ENST00000503420 NFIXQ14938 502 aa28.91■■■□□ 2.22
CCHCR1-217ENST00000503420 POLRMTO00411 1230 aaKnown RBP28.9■■■□□ 2.22
CCHCR1-217ENST00000503420 WWC3Q9ULE0 1092 aa28.9■■■□□ 2.22
CCHCR1-217ENST00000503420 A0A0G2JLW4 131 aa28.89■■■□□ 2.22
CCHCR1-217ENST00000503420 EIF4A1P60842 406 aaKnown RBP28.89■■■□□ 2.22
CCHCR1-217ENST00000503420 BICDL1Q6ZP65 573 aa28.89■■■□□ 2.22
CCHCR1-217ENST00000503420 BCL2L12Q9HB09 334 aa28.89■■■□□ 2.22
CCHCR1-217ENST00000503420 BABAM1Q9NWV8 329 aa28.89■■■□□ 2.22
CCHCR1-217ENST00000503420 C10orf71Q711Q0 1435 aa28.88■■■□□ 2.21
CCHCR1-217ENST00000503420 PIP4K2AP48426 406 aaPredicted RBP28.88■■■□□ 2.21
CCHCR1-217ENST00000503420 DZIP3Q86Y13 1208 aaKnown RBP28.88■■■□□ 2.21
CCHCR1-217ENST00000503420 GIGYF1O75420 1035 aaPredicted RBP28.87■■■□□ 2.21
CCHCR1-217ENST00000503420 SERPINB2P05120 415 aa28.86■■■□□ 2.21
CCHCR1-217ENST00000503420 DPEP1P16444 411 aa28.86■■■□□ 2.21
CCHCR1-217ENST00000503420 TBC1D9BQ66K14 1250 aa28.83■■■□□ 2.21
CCHCR1-217ENST00000503420 BCS1LQ9Y276 419 aa28.83■■■□□ 2.21
CCHCR1-217ENST00000503420 ZNF652Q9Y2D9 606 aa28.83■■■□□ 2.21
CCHCR1-217ENST00000503420 LAS1LQ9Y4W2 734 aaKnown RBP28.83■■■□□ 2.21
CCHCR1-217ENST00000503420 NPHP1O15259 732 aa28.82■■■□□ 2.2
CCHCR1-217ENST00000503420 CAMTA2O94983 1202 aa28.82■■■□□ 2.2
CCHCR1-217ENST00000503420 SETDB2Q96T68 719 aa28.82■■■□□ 2.2
CCHCR1-217ENST00000503420 PXDNLA1KZ92 1463 aa28.82■■■□□ 2.2
CCHCR1-217ENST00000503420 NBPF26B4DH59 902 aa28.81■■■□□ 2.2
CCHCR1-217ENST00000503420 NBPF10Q6P3W6 841 aaKnown RBP28.81■■■□□ 2.2
CCHCR1-217ENST00000503420 NBPF15Q8N660 670 aa28.81■■■□□ 2.2
CCHCR1-217ENST00000503420 PIM2Q9P1W9 311 aa28.81■■■□□ 2.2
CCHCR1-217ENST00000503420 TRIM35Q9UPQ4 493 aa28.81■■■□□ 2.2
CCHCR1-217ENST00000503420 CHD4Q14839 1912 aa28.8■■■□□ 2.2
CCHCR1-217ENST00000503420 APAF1O14727 1248 aa28.79■■■□□ 2.2
CCHCR1-217ENST00000503420 CLEC4GQ6UXB4 293 aa28.79■■■□□ 2.2
CCHCR1-217ENST00000503420 NGEFQ8N5V2 710 aa28.79■■■□□ 2.2
CCHCR1-217ENST00000503420 KIF13BQ9NQT8 1826 aa28.78■■■□□ 2.2
CCHCR1-217ENST00000503420 MRS2Q9HD23 443 aa28.77■■■□□ 2.2
CCHCR1-217ENST00000503420 KDM3BQ7LBC6 1761 aa28.77■■■□□ 2.2
CCHCR1-217ENST00000503420 CARMIL3Q8ND23 1372 aa28.76■■■□□ 2.2
CCHCR1-217ENST00000503420 CHL1O00533 1208 aa28.76■■■□□ 2.19
CCHCR1-217ENST00000503420 EIF2S2P20042 333 aaKnown RBP28.76■■■□□ 2.19
CCHCR1-217ENST00000503420 CALD1Q05682 793 aaKnown RBP28.76■■■□□ 2.19
CCHCR1-217ENST00000503420 DALRD3Q5D0E6 543 aaKnown RBP28.76■■■□□ 2.19
CCHCR1-217ENST00000503420 UTRNP46939 3433 aa28.76■■■□□ 2.19
CCHCR1-217ENST00000503420 MYL6BP14649 208 aa28.75■■■□□ 2.19
CCHCR1-217ENST00000503420 CHRNA5P30532 468 aa28.75■■■□□ 2.19
CCHCR1-217ENST00000503420 CCDC184Q52MB2 194 aa28.75■■■□□ 2.19
CCHCR1-217ENST00000503420 RGL2O15211 777 aa28.74■■■□□ 2.19
CCHCR1-217ENST00000503420 KCNA3P22001 575 aa28.74■■■□□ 2.19
CCHCR1-217ENST00000503420 KIF6Q6ZMV9 814 aa28.74■■■□□ 2.19
CCHCR1-217ENST00000503420 ZNF784Q8NCA9 323 aaPredicted RBP28.74■■■□□ 2.19
CCHCR1-217ENST00000503420 ERBB4Q15303 1308 aa28.73■■■□□ 2.19
CCHCR1-217ENST00000503420 CNBD1Q8NA66 436 aa28.73■■■□□ 2.19
CCHCR1-217ENST00000503420 N4BP2Q86UW6 1770 aaPredicted RBP28.73■■■□□ 2.19
CCHCR1-217ENST00000503420 H0YIN7 160 aa28.72■■■□□ 2.19
CCHCR1-217ENST00000503420 ARHGAP27Q6ZUM4 889 aa28.72■■■□□ 2.19
CCHCR1-217ENST00000503420 C2CD5Q86YS7 1000 aa28.72■■■□□ 2.19
CCHCR1-217ENST00000503420 PDZRN3Q9UPQ7 1066 aa28.72■■■□□ 2.19
CCHCR1-217ENST00000503420 GOLGB1Q14789 3259 aaKnown RBP28.72■■■□□ 2.19
CCHCR1-217ENST00000503420 PDE6BP35913 854 aa28.71■■■□□ 2.19
CCHCR1-217ENST00000503420 ST5P78524 1137 aa28.71■■■□□ 2.19
CCHCR1-217ENST00000503420 NBPF5PQ86XG9 351 aaPredicted RBP28.71■■■□□ 2.19
CCHCR1-217ENST00000503420 CFAP44Q96MT7 982 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms