RNA–Protein interactions for RNA: ENST00000503340.1

MATR3-205, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-205ENST00000503340 HTATSF1O43719 755 aaKnown RBP11.43□□□□□ -0.58
MATR3-205ENST00000503340 AEBP1Q8IUX7 1158 aa11.43□□□□□ -0.58
MATR3-205ENST00000503340 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.43□□□□□ -0.58
MATR3-205ENST00000503340 RRP1P56182 461 aaKnown RBP11.42□□□□□ -0.58
MATR3-205ENST00000503340 SPINK5Q9NQ38 1064 aaPredicted RBP11.42□□□□□ -0.58
MATR3-205ENST00000503340 IFT57Q9NWB7 429 aa11.42□□□□□ -0.58
MATR3-205ENST00000503340 PKD1L3Q7Z443 1732 aa11.42□□□□□ -0.58
MATR3-205ENST00000503340 GNAI1P63096 354 aa11.41□□□□□ -0.58
MATR3-205ENST00000503340 ITPK1Q13572 414 aa11.41□□□□□ -0.58
MATR3-205ENST00000503340 CICQ96RK0 1608 aaPredicted RBP11.4□□□□□ -0.58
MATR3-205ENST00000503340 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
MATR3-205ENST00000503340 SIK1P57059 783 aa11.4□□□□□ -0.58
MATR3-205ENST00000503340 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
MATR3-205ENST00000503340 RTF1Q92541 710 aaKnown RBP11.4□□□□□ -0.58
MATR3-205ENST00000503340 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.58
MATR3-205ENST00000503340 ZNF428Q96B54 188 aa11.4□□□□□ -0.58
MATR3-205ENST00000503340 ASAP1Q9ULH1 1129 aa11.4□□□□□ -0.58
MATR3-205ENST00000503340 KIAA1551Q9HCM1 1747 aa11.4□□□□□ -0.58
MATR3-205ENST00000503340 FANCIQ9NVI1 1328 aa11.39□□□□□ -0.59
MATR3-205ENST00000503340 PXDNLA1KZ92 1463 aa11.39□□□□□ -0.59
MATR3-205ENST00000503340 GNPATO15228 680 aa11.39□□□□□ -0.59
MATR3-205ENST00000503340 SSFA2P28290 1259 aa11.39□□□□□ -0.59
MATR3-205ENST00000503340 AMOTQ4VCS5 1084 aa11.39□□□□□ -0.59
MATR3-205ENST00000503340 MMP10P09238 476 aa11.38□□□□□ -0.59
MATR3-205ENST00000503340 ZNF853P0CG23 659 aa11.38□□□□□ -0.59
MATR3-205ENST00000503340 PLEKHO1Q53GL0 409 aaPredicted RBP11.38□□□□□ -0.59
MATR3-205ENST00000503340 CFAP44Q96MT7 982 aa11.38□□□□□ -0.59
MATR3-205ENST00000503340 ZNF219Q9P2Y4 722 aaPredicted RBP11.38□□□□□ -0.59
MATR3-205ENST00000503340 N4BP2Q86UW6 1770 aaPredicted RBP11.37□□□□□ -0.59
MATR3-205ENST00000503340 GNAT3A8MTJ3 354 aa11.37□□□□□ -0.59
MATR3-205ENST00000503340 MTHFSDQ2M296 383 aaKnown RBP11.37□□□□□ -0.59
MATR3-205ENST00000503340 ATG3Q9NT62 314 aa11.37□□□□□ -0.59
MATR3-205ENST00000503340 BABAM1Q9NWV8 329 aa11.37□□□□□ -0.59
MATR3-205ENST00000503340 A0A0G2JLW4 131 aa11.36□□□□□ -0.59
MATR3-205ENST00000503340 ATP6V1AP38606 617 aa11.36□□□□□ -0.59
MATR3-205ENST00000503340 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
MATR3-205ENST00000503340 DNAJC5GQ8N7S2 189 aa11.36□□□□□ -0.59
MATR3-205ENST00000503340 SLC4A9Q96Q91 983 aa11.36□□□□□ -0.59
MATR3-205ENST00000503340 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
MATR3-205ENST00000503340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.59
MATR3-205ENST00000503340 TMOD3Q9NYL9 352 aa11.36□□□□□ -0.59
MATR3-205ENST00000503340 KIF13BQ9NQT8 1826 aa11.36□□□□□ -0.59
MATR3-205ENST00000503340 PHKG2P15735 406 aa11.35□□□□□ -0.59
MATR3-205ENST00000503340 HMGB2P26583 209 aaKnown RBP11.35□□□□□ -0.59
MATR3-205ENST00000503340 RARSP54136 660 aaKnown RBP11.35□□□□□ -0.59
MATR3-205ENST00000503340 NMRK2Q9NPI5 230 aa11.35□□□□□ -0.59
MATR3-205ENST00000503340 SPG7Q9UQ90 795 aa11.35□□□□□ -0.59
MATR3-205ENST00000503340 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
MATR3-205ENST00000503340 C10orf71Q711Q0 1435 aa11.35□□□□□ -0.59
MATR3-205ENST00000503340 CHL1O00533 1208 aa11.34□□□□□ -0.59
MATR3-205ENST00000503340 APLP1P51693 650 aa11.34□□□□□ -0.59
MATR3-205ENST00000503340 HTRA3P83110 453 aa11.34□□□□□ -0.59
MATR3-205ENST00000503340 EXOSC9Q06265 439 aaKnown RBP11.34□□□□□ -0.59
MATR3-205ENST00000503340 ALDH1L2Q3SY69 923 aa11.34□□□□□ -0.59
MATR3-205ENST00000503340 AKAP4Q5JQC9 854 aa11.34□□□□□ -0.59
MATR3-205ENST00000503340 TSR2Q969E8 191 aaKnown RBP11.34□□□□□ -0.59
MATR3-205ENST00000503340 SOS1Q07889 1333 aaPredicted RBP11.34□□□□□ -0.59
MATR3-205ENST00000503340 TOMM70O94826 608 aa11.33□□□□□ -0.6
MATR3-205ENST00000503340 MS4A1P11836 297 aa11.33□□□□□ -0.6
MATR3-205ENST00000503340 DPEP1P16444 411 aa11.33□□□□□ -0.6
MATR3-205ENST00000503340 TGFB2P61812 414 aa11.33□□□□□ -0.6
MATR3-205ENST00000503340 PDE3AQ14432 1141 aa11.33□□□□□ -0.6
MATR3-205ENST00000503340 C1orf141Q5JVX7 400 aa11.33□□□□□ -0.6
MATR3-205ENST00000503340 ARHGAP27Q6ZUM4 889 aa11.33□□□□□ -0.6
MATR3-205ENST00000503340 MBIPQ9NS73 344 aa11.33□□□□□ -0.6
MATR3-205ENST00000503340 LAS1LQ9Y4W2 734 aaKnown RBP11.33□□□□□ -0.6
MATR3-205ENST00000503340 GYS1P13807 737 aa11.32□□□□□ -0.6
MATR3-205ENST00000503340 KCNA3P22001 575 aa11.32□□□□□ -0.6
MATR3-205ENST00000503340 BRPF1P55201 1214 aaPredicted RBP11.32□□□□□ -0.6
MATR3-205ENST00000503340 IRX6P78412 446 aaPredicted RBP11.32□□□□□ -0.6
MATR3-205ENST00000503340 TRAPPC3LQ5T215 181 aa11.32□□□□□ -0.6
MATR3-205ENST00000503340 ZNF530Q6P9A1 599 aaPredicted RBP11.32□□□□□ -0.6
MATR3-205ENST00000503340 MCM10Q7L590 875 aa11.32□□□□□ -0.6
MATR3-205ENST00000503340 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
MATR3-205ENST00000503340 ARHGEF1Q92888 912 aaKnown RBP11.32□□□□□ -0.6
MATR3-205ENST00000503340 THUMPD2Q9BTF0 503 aaKnown RBP11.32□□□□□ -0.6
MATR3-205ENST00000503340 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
MATR3-205ENST00000503340 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
MATR3-205ENST00000503340 CEMIPQ8WUJ3 1361 aa11.31□□□□□ -0.6
MATR3-205ENST00000503340 DCTN1Q14203 1278 aa11.31□□□□□ -0.6
MATR3-205ENST00000503340 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
MATR3-205ENST00000503340 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
MATR3-205ENST00000503340 RTCBQ9Y3I0 505 aaKnown RBP11.31□□□□□ -0.6
MATR3-205ENST00000503340 BRCA1P38398 1863 aaKnown RBP11.3□□□□□ -0.6
MATR3-205ENST00000503340 COL5A3P25940 1745 aaPredicted RBP11.3□□□□□ -0.6
MATR3-205ENST00000503340 WDR90Q96KV7 1748 aa11.3□□□□□ -0.6
MATR3-205ENST00000503340 IPO8O15397 1037 aaKnown RBP11.3□□□□□ -0.6
MATR3-205ENST00000503340 CAPN15O75808 1086 aa11.3□□□□□ -0.6
MATR3-205ENST00000503340 BCAR3O75815 825 aa11.3□□□□□ -0.6
MATR3-205ENST00000503340 HSP90AB1P08238 724 aaKnown RBP11.3□□□□□ -0.6
MATR3-205ENST00000503340 CANXP27824 592 aaKnown RBP11.3□□□□□ -0.6
MATR3-205ENST00000503340 AAMPQ13685 434 aa11.3□□□□□ -0.6
MATR3-205ENST00000503340 TAF7Q15545 349 aaPredicted RBP11.3□□□□□ -0.6
MATR3-205ENST00000503340 NLGN1Q8N2Q7 840 aa11.3□□□□□ -0.6
MATR3-205ENST00000503340 KDM6AO15550 1401 aaPredicted RBP11.29□□□□□ -0.6
MATR3-205ENST00000503340 VAMP4O75379 141 aa11.29□□□□□ -0.6
MATR3-205ENST00000503340 TWISTNBQ3B726 338 aaPredicted RBP11.29□□□□□ -0.6
MATR3-205ENST00000503340 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
MATR3-205ENST00000503340 IL17REQ8NFR9 667 aa11.29□□□□□ -0.6
MATR3-205ENST00000503340 SMC4Q9NTJ3 1288 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms