RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 DPYDQ12882 1025 aa8.2□□□□□ -1.1
RFC1-205ENST00000502991 PTK7Q13308 1070 aa8.2□□□□□ -1.1
RFC1-205ENST00000502991 SH3PXD2AQ5TCZ1 1133 aa8.2□□□□□ -1.1
RFC1-205ENST00000502991 LARP1Q6PKG0 1096 aaKnown RBP8.2□□□□□ -1.1
RFC1-205ENST00000502991 SIX5Q8N196 739 aa8.2□□□□□ -1.1
RFC1-205ENST00000502991 TSPAN10Q9H1Z9 355 aaPredicted RBP8.2□□□□□ -1.1
RFC1-205ENST00000502991 VRTNQ9H8Y1 702 aa8.2□□□□□ -1.1
RFC1-205ENST00000502991 TXLNAP40222 546 aa8.19□□□□□ -1.1
RFC1-205ENST00000502991 USP17L15C9J2P7 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L10C9JJH3 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L13C9JLJ4 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L12C9JPN9 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L11C9JVI0 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L21D6R901 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L18D6R9N7 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L22D6RA61 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L17D6RBQ6 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L19D6RCP7 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L20D6RJB6 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 H7C1W4 665 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 USP17L24Q0WX57 530 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 ZSCAN1Q8NBB4 408 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 KLRG1Q96E93 195 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 ZNF232Q9UNY5 417 aa8.18□□□□□ -1.1
RFC1-205ENST00000502991 CSB-PGBD3P0DP91 1061 aa8.17□□□□□ -1.1
RFC1-205ENST00000502991 PGBD3Q8N328 593 aa8.17□□□□□ -1.1
RFC1-205ENST00000502991 L3MBTL2Q969R5 705 aa8.17□□□□□ -1.1
RFC1-205ENST00000502991 RBM19Q9Y4C8 960 aaKnown RBP8.17□□□□□ -1.1
RFC1-205ENST00000502991 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.16□□□□□ -1.1
RFC1-205ENST00000502991 SEC13P55735 322 aa8.16□□□□□ -1.1
RFC1-205ENST00000502991 UBAP2LQ14157 1087 aaKnown RBP8.16□□□□□ -1.1
RFC1-205ENST00000502991 ARSJQ5FYB0 599 aaPredicted RBP8.16□□□□□ -1.1
RFC1-205ENST00000502991 ANKMY2Q8IV38 441 aa8.16□□□□□ -1.1
RFC1-205ENST00000502991 WHAMMQ8TF30 809 aa8.16□□□□□ -1.1
RFC1-205ENST00000502991 FAM196BA6NMK8 535 aa8.15□□□□□ -1.1
RFC1-205ENST00000502991 C21orf2O43822 256 aa8.15□□□□□ -1.1
RFC1-205ENST00000502991 NOS2P35228 1153 aa8.15□□□□□ -1.1
RFC1-205ENST00000502991 NBPF1Q3BBV0 1214 aa8.15□□□□□ -1.1
RFC1-205ENST00000502991 FOXR1Q6PIV2 292 aa8.15□□□□□ -1.1
RFC1-205ENST00000502991 GMCL1Q96IK5 515 aa8.15□□□□□ -1.1
RFC1-205ENST00000502991 HINFPQ9BQA5 517 aa8.15□□□□□ -1.1
RFC1-205ENST00000502991 C1orf115Q9H7X2 142 aa8.15□□□□□ -1.1
RFC1-205ENST00000502991 A0A1W2PNR3 127 aa8.14□□□□□ -1.11
RFC1-205ENST00000502991 PPP1R12BO60237 982 aaPredicted RBP8.14□□□□□ -1.11
RFC1-205ENST00000502991 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
RFC1-205ENST00000502991 TRIM26Q12899 539 aaPredicted RBP8.14□□□□□ -1.11
RFC1-205ENST00000502991 TEAD4Q15561 434 aa8.14□□□□□ -1.11
RFC1-205ENST00000502991 EFHC2Q5JST6 749 aa8.14□□□□□ -1.11
RFC1-205ENST00000502991 CHMP7Q8WUX9 453 aaPredicted RBP8.14□□□□□ -1.11
RFC1-205ENST00000502991 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
RFC1-205ENST00000502991 TRERF1Q96PN7 1200 aa8.14□□□□□ -1.11
RFC1-205ENST00000502991 CRISPLD1Q9H336 500 aa8.14□□□□□ -1.11
RFC1-205ENST00000502991 HCN4Q9Y3Q4 1203 aa8.14□□□□□ -1.11
RFC1-205ENST00000502991 SERTM1A2A2V5 107 aa8.13□□□□□ -1.11
RFC1-205ENST00000502991 M0R2N6 131 aa8.13□□□□□ -1.11
RFC1-205ENST00000502991 EML1O00423 815 aa8.13□□□□□ -1.11
RFC1-205ENST00000502991 TATP17735 454 aaPredicted RBP8.13□□□□□ -1.11
RFC1-205ENST00000502991 SCG3Q8WXD2 468 aaKnown RBP8.13□□□□□ -1.11
RFC1-205ENST00000502991 CCDC97Q96F63 343 aaPredicted RBP8.13□□□□□ -1.11
RFC1-205ENST00000502991 ZIC5Q96T25 663 aa8.13□□□□□ -1.11
RFC1-205ENST00000502991 ZCCHC2Q9C0B9 1178 aaKnown RBP8.13□□□□□ -1.11
RFC1-205ENST00000502991 HCN2Q9UL51 889 aa8.13□□□□□ -1.11
RFC1-205ENST00000502991 ATAD2Q6PL18 1390 aa8.12□□□□□ -1.11
RFC1-205ENST00000502991 BNIP3LO60238 219 aa8.12□□□□□ -1.11
RFC1-205ENST00000502991 PSMA6P60900 246 aaKnown RBP8.12□□□□□ -1.11
RFC1-205ENST00000502991 BICDL1Q6ZP65 573 aa8.12□□□□□ -1.11
RFC1-205ENST00000502991 IGF1RP08069 1367 aa8.11□□□□□ -1.11
RFC1-205ENST00000502991 DCDC2BA2VCK2 349 aa8.11□□□□□ -1.11
RFC1-205ENST00000502991 MX2P20592 715 aa8.11□□□□□ -1.11
RFC1-205ENST00000502991 SRPK2P78362 688 aaKnown RBP8.11□□□□□ -1.11
RFC1-205ENST00000502991 ZNF385CQ66K41 422 aaPredicted RBP8.11□□□□□ -1.11
RFC1-205ENST00000502991 CCDC82Q8N4S0 544 aa8.11□□□□□ -1.11
RFC1-205ENST00000502991 MBIPQ9NS73 344 aa8.11□□□□□ -1.11
RFC1-205ENST00000502991 ZDHHC3Q9NYG2 299 aa8.11□□□□□ -1.11
RFC1-205ENST00000502991 STK17AQ9UEE5 414 aa8.11□□□□□ -1.11
RFC1-205ENST00000502991 SLURP2P0DP57 97 aa8.1□□□□□ -1.11
RFC1-205ENST00000502991 LYPD4Q6UWN0 246 aa8.1□□□□□ -1.11
RFC1-205ENST00000502991 LRRC69Q6ZNQ3 347 aa8.1□□□□□ -1.11
RFC1-205ENST00000502991 NPM2Q86SE8 214 aaKnown RBP8.1□□□□□ -1.11
RFC1-205ENST00000502991 C1orf216Q8TAB5 229 aa8.1□□□□□ -1.11
RFC1-205ENST00000502991 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
RFC1-205ENST00000502991 C7orf43Q8WVR3 580 aa8.1□□□□□ -1.11
RFC1-205ENST00000502991 NGLY1Q96IV0 654 aa8.1□□□□□ -1.11
RFC1-205ENST00000502991 NDFIP2Q9NV92 336 aa8.1□□□□□ -1.11
RFC1-205ENST00000502991 ZMIZ1Q9ULJ6 1067 aa8.1□□□□□ -1.11
RFC1-205ENST00000502991 NOVA2Q9UNW9 492 aaKnown RBP8.1□□□□□ -1.11
RFC1-205ENST00000502991 CTBSQ01459 385 aa8.09□□□□□ -1.11
RFC1-205ENST00000502991 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
RFC1-205ENST00000502991 SVOPQ8N4V2 548 aa8.09□□□□□ -1.11
RFC1-205ENST00000502991 FAM200AQ8TCP9 573 aa8.09□□□□□ -1.11
RFC1-205ENST00000502991 PHACTR1Q9C0D0 580 aa8.09□□□□□ -1.11
RFC1-205ENST00000502991 GJA3Q9Y6H8 435 aa8.09□□□□□ -1.11
RFC1-205ENST00000502991 C2CD2LO14523 706 aa8.08□□□□□ -1.12
RFC1-205ENST00000502991 ATXN7O15265 892 aaPredicted RBP8.08□□□□□ -1.12
RFC1-205ENST00000502991 LBRQ14739 615 aaKnown RBP8.08□□□□□ -1.12
RFC1-205ENST00000502991 NLRP8Q86W28 1048 aa8.08□□□□□ -1.12
RFC1-205ENST00000502991 ACDQ96AP0 544 aa8.08□□□□□ -1.12
RFC1-205ENST00000502991 HSH2DQ96JZ2 352 aa8.08□□□□□ -1.12
RFC1-205ENST00000502991 C2orf49Q9BVC5 232 aaPredicted RBP8.08□□□□□ -1.12
RFC1-205ENST00000502991 CFHR5Q9BXR6 569 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms