RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
UBE2D3-212ENST00000502563 CYP19A1P11511 503 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-212ENST00000502563 KCNQ4P56696 695 aa14.05□□□□□ -0.16
UBE2D3-212ENST00000502563 CFAP44Q96MT7 982 aa14.05□□□□□ -0.16
UBE2D3-212ENST00000502563 IL16Q14005 1332 aa14.05□□□□□ -0.16
UBE2D3-212ENST00000502563 PSDA5PKW4 1024 aaPredicted RBP14.04□□□□□ -0.16
UBE2D3-212ENST00000502563 RGL2O15211 777 aa14.04□□□□□ -0.16
UBE2D3-212ENST00000502563 SNRPA1P09661 255 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-212ENST00000502563 CRKLP46109 303 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-212ENST00000502563 IFT57Q9NWB7 429 aa14.04□□□□□ -0.16
UBE2D3-212ENST00000502563 RTCBQ9Y3I0 505 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-212ENST00000502563 LAMB4A4D0S4 1761 aa14.04□□□□□ -0.16
UBE2D3-212ENST00000502563 HOXB7P09629 217 aa14.03□□□□□ -0.16
UBE2D3-212ENST00000502563 KCNA4P22459 653 aa14.03□□□□□ -0.16
UBE2D3-212ENST00000502563 EIF4A1P60842 406 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-212ENST00000502563 DNAJC10Q8IXB1 793 aa14.03□□□□□ -0.16
UBE2D3-212ENST00000502563 SPON1Q9HCB6 807 aa14.03□□□□□ -0.16
UBE2D3-212ENST00000502563 CCDC87Q9NVE4 849 aa14.03□□□□□ -0.16
UBE2D3-212ENST00000502563 SOS1Q07889 1333 aaPredicted RBP14.03□□□□□ -0.16
UBE2D3-212ENST00000502563 ERBB4Q15303 1308 aa14.03□□□□□ -0.16
UBE2D3-212ENST00000502563 GNPATO15228 680 aa14.02□□□□□ -0.17
UBE2D3-212ENST00000502563 GIGYF1O75420 1035 aaPredicted RBP14.02□□□□□ -0.17
UBE2D3-212ENST00000502563 INTS5Q6P9B9 1019 aaKnown RBP14.02□□□□□ -0.17
UBE2D3-212ENST00000502563 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.17
UBE2D3-212ENST00000502563 WWC1Q8IX03 1113 aa14.02□□□□□ -0.17
UBE2D3-212ENST00000502563 SGIP1Q9BQI5 828 aa14.02□□□□□ -0.17
UBE2D3-212ENST00000502563 THUMPD2Q9BTF0 503 aaKnown RBP14.02□□□□□ -0.17
UBE2D3-212ENST00000502563 TSPYL4Q9UJ04 414 aa14.02□□□□□ -0.17
UBE2D3-212ENST00000502563 RRP7AQ9Y3A4 280 aaKnown RBP14.02□□□□□ -0.17
UBE2D3-212ENST00000502563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.01□□□□□ -0.17
UBE2D3-212ENST00000502563 GNAI1P63096 354 aa14.01□□□□□ -0.17
UBE2D3-212ENST00000502563 NEUROD2Q15784 382 aa14.01□□□□□ -0.17
UBE2D3-212ENST00000502563 WDR63Q8IWG1 891 aa14.01□□□□□ -0.17
UBE2D3-212ENST00000502563 KCNQ3O43525 872 aa14□□□□□ -0.17
UBE2D3-212ENST00000502563 IL6STP40189 918 aaPredicted RBP14□□□□□ -0.17
UBE2D3-212ENST00000502563 EIF5P55010 431 aaKnown RBP14□□□□□ -0.17
UBE2D3-212ENST00000502563 TRAPPC3LQ5T215 181 aa14□□□□□ -0.17
UBE2D3-212ENST00000502563 CHMP4AQ9BY43 222 aa14□□□□□ -0.17
UBE2D3-212ENST00000502563 SRCAPQ6ZRS2 3230 aa14□□□□□ -0.17
UBE2D3-212ENST00000502563 C4AP0C0L4 1744 aa13.99□□□□□ -0.17
UBE2D3-212ENST00000502563 PTGER2P43116 358 aa13.99□□□□□ -0.17
UBE2D3-212ENST00000502563 AMIGO3Q86WK7 504 aa13.99□□□□□ -0.17
UBE2D3-212ENST00000502563 FAM9BQ8IZU0 186 aa13.99□□□□□ -0.17
UBE2D3-212ENST00000502563 ZBTB1Q9Y2K1 713 aa13.99□□□□□ -0.17
UBE2D3-212ENST00000502563 COL15A1P39059 1388 aa13.98□□□□□ -0.17
UBE2D3-212ENST00000502563 ZNF521Q96K83 1311 aa13.98□□□□□ -0.17
UBE2D3-212ENST00000502563 A0A087WZG4 1122 aa13.98□□□□□ -0.17
UBE2D3-212ENST00000502563 ARHGEF1Q92888 912 aaKnown RBP13.98□□□□□ -0.17
UBE2D3-212ENST00000502563 PDGFDQ9GZP0 370 aaPredicted RBP13.98□□□□□ -0.17
UBE2D3-212ENST00000502563 USP42Q9H9J4 1324 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-212ENST00000502563 NLGN1Q8N2Q7 840 aa13.97□□□□□ -0.17
UBE2D3-212ENST00000502563 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
UBE2D3-212ENST00000502563 USP16Q9Y5T5 823 aa13.97□□□□□ -0.17
UBE2D3-212ENST00000502563 RFC4P35249 363 aa13.96□□□□□ -0.17
UBE2D3-212ENST00000502563 MIER1Q8N108 512 aa13.96□□□□□ -0.17
UBE2D3-212ENST00000502563 MBIPQ9NS73 344 aa13.96□□□□□ -0.17
UBE2D3-212ENST00000502563 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
UBE2D3-212ENST00000502563 NARFQ9UHQ1 456 aa13.96□□□□□ -0.17
UBE2D3-212ENST00000502563 POLD1P28340 1107 aa13.95□□□□□ -0.18
UBE2D3-212ENST00000502563 SCN7AQ01118 1682 aa13.95□□□□□ -0.18
UBE2D3-212ENST00000502563 ZBTB7AO95365 584 aa13.94□□□□□ -0.18
UBE2D3-212ENST00000502563 GYS1P13807 737 aa13.94□□□□□ -0.18
UBE2D3-212ENST00000502563 PRAMEF22A3QJZ6 481 aa13.93□□□□□ -0.18
UBE2D3-212ENST00000502563 PHF14O94880 888 aa13.93□□□□□ -0.18
UBE2D3-212ENST00000502563 CLEC4GQ6UXB4 293 aa13.93□□□□□ -0.18
UBE2D3-212ENST00000502563 BCORQ6W2J9 1755 aa13.92□□□□□ -0.18
UBE2D3-212ENST00000502563 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
UBE2D3-212ENST00000502563 ZPR1O75312 459 aa13.92□□□□□ -0.18
UBE2D3-212ENST00000502563 A1BGP04217 495 aa13.92□□□□□ -0.18
UBE2D3-212ENST00000502563 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
UBE2D3-212ENST00000502563 LRP10Q7Z4F1 713 aa13.92□□□□□ -0.18
UBE2D3-212ENST00000502563 NPM2Q86SE8 214 aaKnown RBP13.92□□□□□ -0.18
UBE2D3-212ENST00000502563 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
UBE2D3-212ENST00000502563 ERVV-1B6SEH8 477 aa13.91□□□□□ -0.18
UBE2D3-212ENST00000502563 CANXP27824 592 aaKnown RBP13.91□□□□□ -0.18
UBE2D3-212ENST00000502563 ARXQ96QS3 562 aa13.91□□□□□ -0.18
UBE2D3-212ENST00000502563 MYH16Q9H6N6 1097 aa13.91□□□□□ -0.18
UBE2D3-212ENST00000502563 PDIA6Q15084 440 aa13.9□□□□□ -0.18
UBE2D3-212ENST00000502563 DDX21Q9NR30 783 aaKnown RBP eCLIP13.9□□□□□ -0.18
UBE2D3-212ENST00000502563 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
UBE2D3-212ENST00000502563 CAMTA2O94983 1202 aa13.89□□□□□ -0.19
UBE2D3-212ENST00000502563 TM4SF1P30408 202 aa13.89□□□□□ -0.19
UBE2D3-212ENST00000502563 DUSP27Q5VZP5 1158 aa13.89□□□□□ -0.19
UBE2D3-212ENST00000502563 BCL2L12Q9HB09 334 aa13.89□□□□□ -0.19
UBE2D3-212ENST00000502563 DBF4Q9UBU7 674 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-212ENST00000502563 ZNF652Q9Y2D9 606 aa13.89□□□□□ -0.19
UBE2D3-212ENST00000502563 LAS1LQ9Y4W2 734 aaKnown RBP13.89□□□□□ -0.19
UBE2D3-212ENST00000502563 CD2APQ9Y5K6 639 aa13.89□□□□□ -0.19
UBE2D3-212ENST00000502563 NRXN2Q9P2S2 1712 aa13.89□□□□□ -0.19
UBE2D3-212ENST00000502563 FANCIQ9NVI1 1328 aa13.89□□□□□ -0.19
UBE2D3-212ENST00000502563 KIF13BQ9NQT8 1826 aa13.88□□□□□ -0.19
UBE2D3-212ENST00000502563 E9PSI1 815 aa13.88□□□□□ -0.19
UBE2D3-212ENST00000502563 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
UBE2D3-212ENST00000502563 HDGFL1Q5TGJ6 251 aa13.88□□□□□ -0.19
UBE2D3-212ENST00000502563 USPL1Q5W0Q7 1092 aa13.88□□□□□ -0.19
UBE2D3-212ENST00000502563 DZIP3Q86Y13 1208 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-212ENST00000502563 ATP10DQ9P241 1426 aa13.88□□□□□ -0.19
UBE2D3-212ENST00000502563 SMIM5Q71RC9 77 aa13.87□□□□□ -0.19
UBE2D3-212ENST00000502563 ZNF428Q96B54 188 aa13.87□□□□□ -0.19
UBE2D3-212ENST00000502563 HYPKQ9NX55 129 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms