RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 ANAPC15P60006 121 aa20.23■□□□□ 0.83
VCAN-204ENST00000502527 IL1RAPL2Q9NP60 686 aa20.23■□□□□ 0.83
VCAN-204ENST00000502527 NBPF7P0C2Y1 421 aaPredicted RBP20.23■□□□□ 0.83
VCAN-204ENST00000502527 MCM2P49736 904 aa20.23■□□□□ 0.83
VCAN-204ENST00000502527 HSP90AB4PQ58FF6 505 aa20.23■□□□□ 0.83
VCAN-204ENST00000502527 FAM43AQ8N2R8 423 aa20.23■□□□□ 0.83
VCAN-204ENST00000502527 KIF1BPQ96EK5 621 aa20.23■□□□□ 0.83
VCAN-204ENST00000502527 ARXQ96QS3 562 aa20.23■□□□□ 0.83
VCAN-204ENST00000502527 RGPD2P0DJD1 1756 aa20.22■□□□□ 0.83
VCAN-204ENST00000502527 KRT28Q7Z3Y7 464 aa20.22■□□□□ 0.83
VCAN-204ENST00000502527 RHPN1Q8TCX5 695 aa20.22■□□□□ 0.83
VCAN-204ENST00000502527 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
VCAN-204ENST00000502527 CYP2E1P05181 493 aaPredicted RBP20.22■□□□□ 0.83
VCAN-204ENST00000502527 ANO2Q9NQ90 1003 aa20.22■□□□□ 0.83
VCAN-204ENST00000502527 PXDNQ92626 1479 aa20.21■□□□□ 0.83
VCAN-204ENST00000502527 ADCY9O60503 1353 aa20.21■□□□□ 0.83
VCAN-204ENST00000502527 EPB41L2O43491 1005 aaKnown RBP20.21■□□□□ 0.83
VCAN-204ENST00000502527 NEK4P51957 841 aa20.21■□□□□ 0.83
VCAN-204ENST00000502527 PROSER2Q86WR7 435 aaPredicted RBP20.21■□□□□ 0.83
VCAN-204ENST00000502527 GIGYF1O75420 1035 aaPredicted RBP20.2■□□□□ 0.82
VCAN-204ENST00000502527 PLEKHG5O94827 1062 aa20.2■□□□□ 0.82
VCAN-204ENST00000502527 NUTM1Q86Y26 1132 aa20.2■□□□□ 0.82
VCAN-204ENST00000502527 ANXA1P04083 346 aa20.2■□□□□ 0.82
VCAN-204ENST00000502527 HDAC5Q9UQL6 1122 aa20.2■□□□□ 0.82
VCAN-204ENST00000502527 HEG1Q9ULI3 1381 aa20.19■□□□□ 0.82
VCAN-204ENST00000502527 ALDH1L1O75891 902 aa20.19■□□□□ 0.82
VCAN-204ENST00000502527 UNC5CLQ8IV45 518 aa20.19■□□□□ 0.82
VCAN-204ENST00000502527 GRPEL1Q9HAV7 217 aa20.19■□□□□ 0.82
VCAN-204ENST00000502527 IL17RAQ96F46 866 aa20.18■□□□□ 0.82
VCAN-204ENST00000502527 AXIN2Q9Y2T1 843 aa20.18■□□□□ 0.82
VCAN-204ENST00000502527 MTX1Q13505 466 aa20.18■□□□□ 0.82
VCAN-204ENST00000502527 ZGPATQ8N5A5 531 aaKnown RBP20.18■□□□□ 0.82
VCAN-204ENST00000502527 CAMTA1Q9Y6Y1 1673 aa20.17■□□□□ 0.82
VCAN-204ENST00000502527 C1orf167Q5SNV9 1468 aa20.17■□□□□ 0.82
VCAN-204ENST00000502527 LMTK3Q96Q04 1460 aa20.17■□□□□ 0.82
VCAN-204ENST00000502527 KLHL40Q2TBA0 621 aa20.17■□□□□ 0.82
VCAN-204ENST00000502527 KSR2Q6VAB6 950 aa20.17■□□□□ 0.82
VCAN-204ENST00000502527 C19orf44Q9H6X5 657 aa20.17■□□□□ 0.82
VCAN-204ENST00000502527 MST1RQ04912 1400 aa20.17■□□□□ 0.82
VCAN-204ENST00000502527 TRPM3Q9HCF6 1732 aaPredicted RBP20.17■□□□□ 0.82
VCAN-204ENST00000502527 PI4K2BQ8TCG2 481 aa20.17■□□□□ 0.82
VCAN-204ENST00000502527 HYPKQ9NX55 129 aa20.17■□□□□ 0.82
VCAN-204ENST00000502527 MAP3K2Q9Y2U5 619 aa20.17■□□□□ 0.82
VCAN-204ENST00000502527 TMX3Q96JJ7 454 aa20.16■□□□□ 0.82
VCAN-204ENST00000502527 C9orf78Q9NZ63 289 aaPredicted RBP20.16■□□□□ 0.82
VCAN-204ENST00000502527 PALD1Q9ULE6 856 aa20.16■□□□□ 0.82
VCAN-204ENST00000502527 KIF1AQ12756 1690 aa20.16■□□□□ 0.82
VCAN-204ENST00000502527 PANK2Q9BZ23 570 aa20.15■□□□□ 0.82
VCAN-204ENST00000502527 DDX49Q9Y6V7 483 aaKnown RBP20.15■□□□□ 0.82
VCAN-204ENST00000502527 ERBB3P21860 1342 aa20.15■□□□□ 0.82
VCAN-204ENST00000502527 MCTP1Q6DN14 999 aa20.15■□□□□ 0.82
VCAN-204ENST00000502527 CNTROBQ8N137 903 aa20.15■□□□□ 0.82
VCAN-204ENST00000502527 OS9Q13438 667 aaPredicted RBP20.14■□□□□ 0.81
VCAN-204ENST00000502527 PKP1Q13835 747 aa20.14■□□□□ 0.81
VCAN-204ENST00000502527 PROSER3Q2NL68 480 aa20.14■□□□□ 0.81
VCAN-204ENST00000502527 USP42Q9H9J4 1324 aaKnown RBP20.14■□□□□ 0.81
VCAN-204ENST00000502527 DDX58O95786 925 aaKnown RBP20.14■□□□□ 0.81
VCAN-204ENST00000502527 TTC41PQ6P2S7 1318 aa20.13■□□□□ 0.81
VCAN-204ENST00000502527 CUL4AQ13619 759 aa20.13■□□□□ 0.81
VCAN-204ENST00000502527 RAPGEF4Q8WZA2 1011 aa20.12■□□□□ 0.81
VCAN-204ENST00000502527 DDX21Q9NR30 783 aaKnown RBP eCLIP20.12■□□□□ 0.81
VCAN-204ENST00000502527 HSPA4P34932 840 aa20.12■□□□□ 0.81
VCAN-204ENST00000502527 ERC1Q8IUD2 1116 aa20.12■□□□□ 0.81
VCAN-204ENST00000502527 LINS1Q8NG48 757 aa20.12■□□□□ 0.81
VCAN-204ENST00000502527 INTS4Q96HW7 963 aaKnown RBP20.12■□□□□ 0.81
VCAN-204ENST00000502527 SGSM2O43147 1006 aa20.11■□□□□ 0.81
VCAN-204ENST00000502527 GLRX3O76003 335 aaKnown RBP20.11■□□□□ 0.81
VCAN-204ENST00000502527 MAP4K4O95819 1239 aaPredicted RBP20.11■□□□□ 0.81
VCAN-204ENST00000502527 ZC3H6P61129 1189 aaKnown RBP20.11■□□□□ 0.81
VCAN-204ENST00000502527 CLASRPQ8N2M8 674 aaKnown RBP20.11■□□□□ 0.81
VCAN-204ENST00000502527 ZDHHC9Q9Y397 364 aa20.11■□□□□ 0.81
VCAN-204ENST00000502527 PRAMEF22A3QJZ6 481 aa20.11■□□□□ 0.81
VCAN-204ENST00000502527 GAS2L3Q86XJ1 694 aa20.11■□□□□ 0.81
VCAN-204ENST00000502527 LMBRD1Q9NUN5 540 aa20.11■□□□□ 0.81
VCAN-204ENST00000502527 IL25Q9H293 177 aa20.1■□□□□ 0.81
VCAN-204ENST00000502527 ADAMTS7Q9UKP4 1686 aa20.1■□□□□ 0.81
VCAN-204ENST00000502527 GPATCH3Q96I76 525 aa20.09■□□□□ 0.81
VCAN-204ENST00000502527 NLRP2Q9NX02 1062 aa20.09■□□□□ 0.81
VCAN-204ENST00000502527 RAD50Q92878 1312 aa20.09■□□□□ 0.81
VCAN-204ENST00000502527 SIPA1L3O60292 1781 aaPredicted RBP20.09■□□□□ 0.81
VCAN-204ENST00000502527 ATF3P18847 181 aa20.09■□□□□ 0.81
VCAN-204ENST00000502527 CWF19L2Q2TBE0 894 aaKnown RBP20.09■□□□□ 0.81
VCAN-204ENST00000502527 GRM8O00222 908 aa20.08■□□□□ 0.81
VCAN-204ENST00000502527 TATP17735 454 aaPredicted RBP20.08■□□□□ 0.81
VCAN-204ENST00000502527 ZNF790Q6PG37 636 aa20.08■□□□□ 0.81
VCAN-204ENST00000502527 SLC52A2Q9HAB3 445 aa20.08■□□□□ 0.81
VCAN-204ENST00000502527 SPG7Q9UQ90 795 aa20.08■□□□□ 0.81
VCAN-204ENST00000502527 UTYO14607 1347 aa20.08■□□□□ 0.8
VCAN-204ENST00000502527 KIAA1211Q6ZU35 1233 aa20.07■□□□□ 0.8
VCAN-204ENST00000502527 ECHDC1Q9NTX5 307 aa20.07■□□□□ 0.8
VCAN-204ENST00000502527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.07■□□□□ 0.82e-7■■■■■ 28.3
VCAN-204ENST00000502527 NPHP3Q7Z494 1330 aa20.07■□□□□ 0.8
VCAN-204ENST00000502527 PDIA6Q15084 440 aa20.07■□□□□ 0.8
VCAN-204ENST00000502527 UPF3BQ9BZI7 483 aaKnown RBP20.07■□□□□ 0.8
VCAN-204ENST00000502527 AK9Q5TCS8 1911 aa20.07■□□□□ 0.8
VCAN-204ENST00000502527 ALS2Q96Q42 1657 aa20.07■□□□□ 0.8
VCAN-204ENST00000502527 IFIT2P09913 472 aaKnown RBP20.06■□□□□ 0.8
VCAN-204ENST00000502527 RUFY2Q8WXA3 655 aa20.06■□□□□ 0.8
VCAN-204ENST00000502527 LSG1Q9H089 658 aaKnown RBP20.06■□□□□ 0.8
VCAN-204ENST00000502527 PHKG2P15735 406 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms