RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 USH1CQ9Y6N9 552 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 COG7P83436 770 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 CEP85LQ5SZL2 805 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 SSBP05455 408 aaKnown RBP eCLIP5.52□□□□□ -1.53
NEAT1-202ENST00000501122 DYNC1I2Q13409 638 aaKnown RBP5.52□□□□□ -1.53
NEAT1-202ENST00000501122 MPP4Q96JB8 637 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 MYSM1Q5VVJ2 828 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 CLUAP1Q96AJ1 413 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 LARSQ9P2J5 1176 aaKnown RBP5.52□□□□□ -1.53
NEAT1-202ENST00000501122 IFFO1Q0D2I5 559 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 A0A0G2JS52 829 aa5.52□□□□□ -1.53
NEAT1-202ENST00000501122 RINLQ6ZS11 566 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 VPS41P49754 854 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.51□□□□□ -1.532e-12■□□□□ 10.7
NEAT1-202ENST00000501122 CABS1Q96KC9 395 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 ATP2B1P20020 1258 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 EFCAB13Q8IY85 973 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 ARL10Q8N8L6 244 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 TROVE2P10155 538 aaKnown RBP eCLIP5.51□□□□□ -1.53
NEAT1-202ENST00000501122 GKAP1Q5VSY0 366 aaPredicted RBP5.51□□□□□ -1.53
NEAT1-202ENST00000501122 GRAMD4Q6IC98 578 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 CCDC80Q76M96 950 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 GAS2L3Q86XJ1 694 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 CCDC180Q9P1Z9 1646 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 PDCP20941 246 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 CCDC57Q2TAC2 916 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 CPLX4Q7Z7G2 160 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 AFAP1L1Q8TED9 768 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 KLHL40Q2TBA0 621 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 CCDC186Q7Z3E2 898 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 ARIH1Q9Y4X5 557 aaPredicted RBP5.51□□□□□ -1.53
NEAT1-202ENST00000501122 SEMA3FQ13275 785 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 EXOC8Q8IYI6 725 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 G3BP2Q9UN86 482 aaKnown RBP5.51□□□□□ -1.53
NEAT1-202ENST00000501122 GFAPP14136 432 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 SNCBQ16143 134 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 TMED8Q6PL24 325 aaPredicted RBP5.51□□□□□ -1.53
NEAT1-202ENST00000501122 IKBKGQ9Y6K9 419 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 SYT10Q6XYQ8 523 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 RIOK3O14730 519 aaKnown RBP5.51□□□□□ -1.53
NEAT1-202ENST00000501122 TNPO1Q92973 898 aaKnown RBP5.51□□□□□ -1.53
NEAT1-202ENST00000501122 TTC12Q9H892 705 aaPredicted RBP5.51□□□□□ -1.53
NEAT1-202ENST00000501122 SPECC1Q5M775 1068 aa5.51□□□□□ -1.53
NEAT1-202ENST00000501122 RNF10Q8N5U6 811 aaKnown RBP5.51□□□□□ -1.53
NEAT1-202ENST00000501122 POLE2P56282 527 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 BCL2L12Q9HB09 334 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 BIN2Q9UBW5 565 aaPredicted RBP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 RIPOR2Q9Y4F9 1068 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 WDR75Q8IWA0 830 aaKnown RBP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 LRRC43Q8N309 656 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 HAUS1Q96CS2 278 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 NDUFAB1O14561 156 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 CCDC144CPQ8IYA2 1237 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 NOL3O60936 208 aaKnown RBP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 HOOK3Q86VS8 718 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 RAB11FIP4Q86YS3 637 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 CEP57L1Q8IYX8 460 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 RNF123Q5XPI4 1314 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 TMED1Q13445 227 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 PSMD6Q15008 389 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 MAP3K11Q16584 847 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 SPDL1Q96EA4 605 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 PFDN4Q9NQP4 134 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 FAF1Q9UNN5 650 aaPredicted RBP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 CAVIN2O95810 425 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 RPSAP08865 295 aaKnown RBP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 JARID2Q92833 1246 aaPredicted RBP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 MYO1CO00159 1063 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 PHLDB2Q86SQ0 1253 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 KIF7Q2M1P5 1343 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 PCYT1AP49585 367 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 LIG3P49916 1009 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 HHATQ5VTY9 493 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 KIAA1524Q8TCG1 905 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 TCP11Q8WWU5 503 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 SKOR1P84550 965 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 MACROD2A1Z1Q3 448 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 C20orf194Q5TEA3 1177 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 MED4Q9NPJ6 270 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 WDR33Q9C0J8 1336 aaKnown RBP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 GNPTABQ3T906 1256 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 KLHDC4Q8TBB5 520 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 MPHOSPH6Q99547 160 aaKnown RBP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 PDRG1Q9NUG6 133 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 BAZ2BQ9UIF8 2168 aaKnown RBP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 SPTY2D1Q68D10 685 aaPredicted RBP5.5□□□□□ -1.53
NEAT1-202ENST00000501122 GOLGA1Q92805 767 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 NEK11Q8NG66 645 aa5.5□□□□□ -1.53
NEAT1-202ENST00000501122 EPB41L2O43491 1005 aaKnown RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 TPP2P29144 1249 aaPredicted RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 RNF216Q9NWF9 866 aaPredicted RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 ZSCAN23Q3MJ62 389 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 LUC7LQ9NQ29 371 aaKnown RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 ZC3H6P61129 1189 aaKnown RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 DEUP1Q05D60 604 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 INTS3Q68E01 1043 aaKnown RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 TMCO5AQ8N6Q1 288 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 CACNA2D3Q8IZS8 1091 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 PRPF31Q8WWY3 499 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms