RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 CCDC30Q5VVM6 783 aa25.14■■□□□ 1.61
LINC01550-201ENST00000499006 ILDR2Q71H61 639 aa25.14■■□□□ 1.61
LINC01550-201ENST00000499006 LRRC4BQ9NT99 713 aa25.14■■□□□ 1.61
LINC01550-201ENST00000499006 C4BP0C0L5 1744 aa25.13■■□□□ 1.61
LINC01550-201ENST00000499006 KCNQ4P56696 695 aa25.13■■□□□ 1.61
LINC01550-201ENST00000499006 NECTIN2Q92692 538 aa25.13■■□□□ 1.61
LINC01550-201ENST00000499006 STARD3NLO95772 234 aa25.12■■□□□ 1.61
LINC01550-201ENST00000499006 TXNRD1Q16881 649 aa25.12■■□□□ 1.61
LINC01550-201ENST00000499006 SSH1Q8WYL5 1049 aa25.12■■□□□ 1.61
LINC01550-201ENST00000499006 SF3B2Q13435 895 aaKnown RBP25.11■■□□□ 1.61
LINC01550-201ENST00000499006 LINC00116Q8NCU8 138 aa25.11■■□□□ 1.61
LINC01550-201ENST00000499006 ERBB4Q15303 1308 aa25.1■■□□□ 1.61
LINC01550-201ENST00000499006 PDIA6Q15084 440 aa25.1■■□□□ 1.61
LINC01550-201ENST00000499006 CAMKK2Q96RR4 588 aa25.1■■□□□ 1.61
LINC01550-201ENST00000499006 TCERG1O14776 1098 aaKnown RBP25.09■■□□□ 1.61
LINC01550-201ENST00000499006 BRPF1P55201 1214 aaPredicted RBP25.09■■□□□ 1.61
LINC01550-201ENST00000499006 CHPF2Q9P2E5 772 aa25.09■■□□□ 1.61
LINC01550-201ENST00000499006 DBF4Q9UBU7 674 aaPredicted RBP25.09■■□□□ 1.61
LINC01550-201ENST00000499006 NUP188Q5SRE5 1749 aa25.09■■□□□ 1.61
LINC01550-201ENST00000499006 UBR3Q6ZT12 1888 aa25.09■■□□□ 1.61
LINC01550-201ENST00000499006 BCAR3O75815 825 aa25.09■■□□□ 1.61
LINC01550-201ENST00000499006 A1BGP04217 495 aa25.09■■□□□ 1.61
LINC01550-201ENST00000499006 BAG6P46379 1132 aa25.09■■□□□ 1.61
LINC01550-201ENST00000499006 EN1Q05925 392 aaPredicted RBP25.09■■□□□ 1.61
LINC01550-201ENST00000499006 NBPF26B4DH59 902 aa25.08■■□□□ 1.6
LINC01550-201ENST00000499006 CRKLP46109 303 aaKnown RBP25.08■■□□□ 1.6
LINC01550-201ENST00000499006 NBPF14Q5TI25 921 aa25.08■■□□□ 1.6
LINC01550-201ENST00000499006 NBPF10Q6P3W6 841 aaKnown RBP25.08■■□□□ 1.6
LINC01550-201ENST00000499006 MRPL50Q8N5N7 158 aaKnown RBP25.08■■□□□ 1.6
LINC01550-201ENST00000499006 NBPF15Q8N660 670 aa25.08■■□□□ 1.6
LINC01550-201ENST00000499006 UPF1Q92900 1129 aaKnown RBP eCLIP25.08■■□□□ 1.6
LINC01550-201ENST00000499006 BCL2L13Q9BXK5 485 aa25.08■■□□□ 1.6
LINC01550-201ENST00000499006 STK31Q9BXU1 1019 aa25.08■■□□□ 1.6
LINC01550-201ENST00000499006 DDX21Q9NR30 783 aaKnown RBP eCLIP25.08■■□□□ 1.6
LINC01550-201ENST00000499006 CNTNAP4Q9C0A0 1308 aa25.07■■□□□ 1.6
LINC01550-201ENST00000499006 PROSER3Q2NL68 480 aa25.07■■□□□ 1.6
LINC01550-201ENST00000499006 INTS5Q6P9B9 1019 aaKnown RBP25.07■■□□□ 1.6
LINC01550-201ENST00000499006 LRP10Q7Z4F1 713 aa25.07■■□□□ 1.6
LINC01550-201ENST00000499006 SMC4Q9NTJ3 1288 aa25.07■■□□□ 1.6
LINC01550-201ENST00000499006 SLC4A2P04920 1241 aa25.06■■□□□ 1.6
LINC01550-201ENST00000499006 EZH2Q15910 746 aaKnown RBP25.06■■□□□ 1.6
LINC01550-201ENST00000499006 RC3H1Q5TC82 1133 aaKnown RBP25.06■■□□□ 1.6
LINC01550-201ENST00000499006 DEFB132Q7Z7B7 95 aa25.05■■□□□ 1.6
LINC01550-201ENST00000499006 CCDC87Q9NVE4 849 aa25.05■■□□□ 1.6
LINC01550-201ENST00000499006 ZBTB1Q9Y2K1 713 aa25.05■■□□□ 1.6
LINC01550-201ENST00000499006 TUBGCP6Q96RT7 1819 aa25.05■■□□□ 1.6
LINC01550-201ENST00000499006 ANXA1P04083 346 aa25.04■■□□□ 1.6
LINC01550-201ENST00000499006 HMGB2P26583 209 aaKnown RBP25.04■■□□□ 1.6
LINC01550-201ENST00000499006 PIP4K2AP48426 406 aaPredicted RBP25.04■■□□□ 1.6
LINC01550-201ENST00000499006 HYPKQ9NX55 129 aa25.03■■□□□ 1.6
LINC01550-201ENST00000499006 MYL6BP14649 208 aa25.02■■□□□ 1.6
LINC01550-201ENST00000499006 G2E3Q7L622 706 aa25.02■■□□□ 1.6
LINC01550-201ENST00000499006 PHAXQ9H814 394 aaKnown RBP25.01■■□□□ 1.59
LINC01550-201ENST00000499006 CANXP27824 592 aaKnown RBP25■■□□□ 1.59
LINC01550-201ENST00000499006 IL6STP40189 918 aaPredicted RBP25■■□□□ 1.59
LINC01550-201ENST00000499006 KIF16BQ96L93 1317 aa25■■□□□ 1.59
LINC01550-201ENST00000499006 C4AP0C0L4 1744 aa24.99■■□□□ 1.59
LINC01550-201ENST00000499006 QSER1Q2KHR3 1735 aa24.99■■□□□ 1.59
LINC01550-201ENST00000499006 EIF5P55010 431 aaKnown RBP24.99■■□□□ 1.59
LINC01550-201ENST00000499006 RNF123Q5XPI4 1314 aa24.99■■□□□ 1.59
LINC01550-201ENST00000499006 ARFGEF2Q9Y6D5 1785 aa24.99■■□□□ 1.59
LINC01550-201ENST00000499006 FLIIQ13045 1269 aa24.98■■□□□ 1.59
LINC01550-201ENST00000499006 NOB1Q9ULX3 412 aaKnown RBP24.98■■□□□ 1.59
LINC01550-201ENST00000499006 BCORQ6W2J9 1755 aa24.97■■□□□ 1.59
LINC01550-201ENST00000499006 RPS6KA4O75676 772 aa24.97■■□□□ 1.59
LINC01550-201ENST00000499006 NUP98P52948 1817 aa24.97■■□□□ 1.59
LINC01550-201ENST00000499006 PTPRCP08575 1304 aa24.97■■□□□ 1.59
LINC01550-201ENST00000499006 N4BP2Q86UW6 1770 aaPredicted RBP24.97■■□□□ 1.59
LINC01550-201ENST00000499006 AKT1S1Q96B36 256 aa24.96■■□□□ 1.59
LINC01550-201ENST00000499006 SUPT16HQ9Y5B9 1047 aaKnown RBP24.96■■□□□ 1.59
LINC01550-201ENST00000499006 GNPATO15228 680 aa24.96■■□□□ 1.59
LINC01550-201ENST00000499006 COPS6Q7L5N1 327 aa24.96■■□□□ 1.59
LINC01550-201ENST00000499006 AMIGO3Q86WK7 504 aa24.96■■□□□ 1.59
LINC01550-201ENST00000499006 XAGE3Q8WTP9 111 aa24.96■■□□□ 1.59
LINC01550-201ENST00000499006 ARHGAP45Q92619 1136 aa24.96■■□□□ 1.59
LINC01550-201ENST00000499006 AK7Q96M32 723 aa24.96■■□□□ 1.59
LINC01550-201ENST00000499006 ZNF827Q17R98 1081 aa24.95■■□□□ 1.58
LINC01550-201ENST00000499006 COL15A1P39059 1388 aa24.94■■□□□ 1.58
LINC01550-201ENST00000499006 RRP1P56182 461 aaKnown RBP24.94■■□□□ 1.58
LINC01550-201ENST00000499006 FRAT1Q92837 279 aaPredicted RBP24.94■■□□□ 1.58
LINC01550-201ENST00000499006 RTCBQ9Y3I0 505 aaKnown RBP24.94■■□□□ 1.58
LINC01550-201ENST00000499006 IPO8O15397 1037 aaKnown RBP24.93■■□□□ 1.58
LINC01550-201ENST00000499006 TTLL7Q6ZT98 887 aa24.93■■□□□ 1.58
LINC01550-201ENST00000499006 SCN7AQ01118 1682 aa24.92■■□□□ 1.58
LINC01550-201ENST00000499006 PLIN1O60240 522 aa24.92■■□□□ 1.58
LINC01550-201ENST00000499006 AIMP1Q12904 312 aaKnown RBP24.92■■□□□ 1.58
LINC01550-201ENST00000499006 FKBP5Q13451 457 aaPredicted RBP24.92■■□□□ 1.58
LINC01550-201ENST00000499006 ZKSCAN2Q63HK3 967 aa24.92■■□□□ 1.58
LINC01550-201ENST00000499006 ATF7IPQ6VMQ6 1270 aa24.92■■□□□ 1.58
LINC01550-201ENST00000499006 ZNF330Q9Y3S2 320 aaPredicted RBP24.92■■□□□ 1.58
LINC01550-201ENST00000499006 ANKRD36CQ5JPF3 1778 aa24.92■■□□□ 1.58
LINC01550-201ENST00000499006 TRIM27P14373 513 aa24.91■■□□□ 1.58
LINC01550-201ENST00000499006 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.91■■□□□ 1.58
LINC01550-201ENST00000499006 ADCY9O60503 1353 aa24.91■■□□□ 1.58
LINC01550-201ENST00000499006 SMIM5Q71RC9 77 aa24.9■■□□□ 1.58
LINC01550-201ENST00000499006 ANO8Q9HCE9 1232 aaPredicted RBP24.9■■□□□ 1.58
LINC01550-201ENST00000499006 DDX58O95786 925 aaKnown RBP24.89■■□□□ 1.58
LINC01550-201ENST00000499006 ADRA2BP18089 450 aa24.89■■□□□ 1.58
LINC01550-201ENST00000499006 SSFA2P28290 1259 aa24.89■■□□□ 1.58
LINC01550-201ENST00000499006 ANKRD13DQ6ZTN6 518 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms