RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 PDIA6Q15084 440 aa13.96□□□□□ -0.17
GPATCH4-210ENST00000498756 PROSER3Q2NL68 480 aa13.96□□□□□ -0.17
GPATCH4-210ENST00000498756 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.17
GPATCH4-210ENST00000498756 CCNL1Q9UK58 526 aaPredicted RBP13.96□□□□□ -0.17
GPATCH4-210ENST00000498756 NBPF26B4DH59 902 aa13.95□□□□□ -0.18
GPATCH4-210ENST00000498756 NBPF10Q6P3W6 841 aaKnown RBP13.95□□□□□ -0.18
GPATCH4-210ENST00000498756 INTS5Q6P9B9 1019 aaKnown RBP13.95□□□□□ -0.18
GPATCH4-210ENST00000498756 NBPF15Q8N660 670 aa13.95□□□□□ -0.18
GPATCH4-210ENST00000498756 SSH1Q8WYL5 1049 aa13.95□□□□□ -0.18
GPATCH4-210ENST00000498756 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
GPATCH4-210ENST00000498756 STK32BQ9NY57 414 aa13.95□□□□□ -0.18
GPATCH4-210ENST00000498756 C5P01031 1676 aa13.95□□□□□ -0.18
GPATCH4-210ENST00000498756 BCAR3O75815 825 aa13.94□□□□□ -0.18
GPATCH4-210ENST00000498756 RARSP54136 660 aaKnown RBP13.94□□□□□ -0.18
GPATCH4-210ENST00000498756 G2E3Q7L622 706 aa13.94□□□□□ -0.18
GPATCH4-210ENST00000498756 AMIGO3Q86WK7 504 aa13.94□□□□□ -0.18
GPATCH4-210ENST00000498756 BCL2L13Q9BXK5 485 aa13.94□□□□□ -0.18
GPATCH4-210ENST00000498756 TJP1Q07157 1748 aa13.93□□□□□ -0.18
GPATCH4-210ENST00000498756 SLC15A2Q16348 729 aa13.93□□□□□ -0.18
GPATCH4-210ENST00000498756 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
GPATCH4-210ENST00000498756 LRP10Q7Z4F1 713 aa13.93□□□□□ -0.18
GPATCH4-210ENST00000498756 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
GPATCH4-210ENST00000498756 PDGFDQ9GZP0 370 aaPredicted RBP13.93□□□□□ -0.18
GPATCH4-210ENST00000498756 CHPF2Q9P2E5 772 aa13.93□□□□□ -0.18
GPATCH4-210ENST00000498756 LY75O60449 1722 aa13.93□□□□□ -0.18
GPATCH4-210ENST00000498756 HOXB7P09629 217 aa13.92□□□□□ -0.18
GPATCH4-210ENST00000498756 CRKLP46109 303 aaKnown RBP13.92□□□□□ -0.18
GPATCH4-210ENST00000498756 ZBTB1Q9Y2K1 713 aa13.92□□□□□ -0.18
GPATCH4-210ENST00000498756 LRP5O75197 1615 aa13.91□□□□□ -0.18
GPATCH4-210ENST00000498756 CANXP27824 592 aaKnown RBP13.91□□□□□ -0.18
GPATCH4-210ENST00000498756 TEX13AQ9BXU3 409 aaPredicted RBP13.91□□□□□ -0.18
GPATCH4-210ENST00000498756 PHAXQ9H814 394 aaKnown RBP13.91□□□□□ -0.18
GPATCH4-210ENST00000498756 SPON1Q9HCB6 807 aa13.91□□□□□ -0.18
GPATCH4-210ENST00000498756 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
GPATCH4-210ENST00000498756 MYL6BP14649 208 aa13.9□□□□□ -0.18
GPATCH4-210ENST00000498756 ZNF827Q17R98 1081 aa13.9□□□□□ -0.18
GPATCH4-210ENST00000498756 SLC27A3Q5K4L6 730 aa13.9□□□□□ -0.18
GPATCH4-210ENST00000498756 CCDC30Q5VVM6 783 aa13.9□□□□□ -0.18
GPATCH4-210ENST00000498756 CCDC87Q9NVE4 849 aa13.9□□□□□ -0.18
GPATCH4-210ENST00000498756 RCAN3Q9UKA8 241 aa13.9□□□□□ -0.18
GPATCH4-210ENST00000498756 TNNQ9UQP3 1299 aa13.9□□□□□ -0.18
GPATCH4-210ENST00000498756 MYH14Q7Z406 1995 aaKnown RBP13.89□□□□□ -0.19
GPATCH4-210ENST00000498756 ZBTB7AO95365 584 aa13.89□□□□□ -0.19
GPATCH4-210ENST00000498756 STARD3NLO95772 234 aa13.89□□□□□ -0.19
GPATCH4-210ENST00000498756 CT47B1P0C2W7 299 aaPredicted RBP13.89□□□□□ -0.19
GPATCH4-210ENST00000498756 SOS1Q07889 1333 aaPredicted RBP13.89□□□□□ -0.19
GPATCH4-210ENST00000498756 ALDH1L2Q3SY69 923 aa13.88□□□□□ -0.19
GPATCH4-210ENST00000498756 RC3H1Q5TC82 1133 aaKnown RBP13.88□□□□□ -0.19
GPATCH4-210ENST00000498756 TTLL7Q6ZT98 887 aa13.88□□□□□ -0.19
GPATCH4-210ENST00000498756 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
GPATCH4-210ENST00000498756 DDX21Q9NR30 783 aaKnown RBP eCLIP13.88□□□□□ -0.19
GPATCH4-210ENST00000498756 PPP1R1BQ9UD71 204 aaPredicted RBP13.88□□□□□ -0.19
GPATCH4-210ENST00000498756 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
GPATCH4-210ENST00000498756 PLIN1O60240 522 aa13.87□□□□□ -0.19
GPATCH4-210ENST00000498756 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
GPATCH4-210ENST00000498756 XAGE3Q8WTP9 111 aa13.87□□□□□ -0.19
GPATCH4-210ENST00000498756 SMC4Q9NTJ3 1288 aa13.87□□□□□ -0.19
GPATCH4-210ENST00000498756 DBF4Q9UBU7 674 aaPredicted RBP13.87□□□□□ -0.19
GPATCH4-210ENST00000498756 NOB1Q9ULX3 412 aaKnown RBP13.87□□□□□ -0.19
GPATCH4-210ENST00000498756 ZNF831Q5JPB2 1677 aa13.87□□□□□ -0.19
GPATCH4-210ENST00000498756 CNTNAP4Q9C0A0 1308 aa13.87□□□□□ -0.19
GPATCH4-210ENST00000498756 COL5A3P25940 1745 aaPredicted RBP13.87□□□□□ -0.19
GPATCH4-210ENST00000498756 CICQ96RK0 1608 aaPredicted RBP13.86□□□□□ -0.19
GPATCH4-210ENST00000498756 TAF1LQ8IZX4 1826 aa13.86□□□□□ -0.19
GPATCH4-210ENST00000498756 GNPATO15228 680 aa13.86□□□□□ -0.19
GPATCH4-210ENST00000498756 RPS6KA4O75676 772 aa13.86□□□□□ -0.19
GPATCH4-210ENST00000498756 AIMP1Q12904 312 aaKnown RBP13.86□□□□□ -0.19
GPATCH4-210ENST00000498756 COPS6Q7L5N1 327 aa13.86□□□□□ -0.19
GPATCH4-210ENST00000498756 TFCP2L1Q9NZI6 479 aa13.86□□□□□ -0.19
GPATCH4-210ENST00000498756 ZNF330Q9Y3S2 320 aaPredicted RBP13.86□□□□□ -0.19
GPATCH4-210ENST00000498756 ZNF428Q96B54 188 aa13.85□□□□□ -0.19
GPATCH4-210ENST00000498756 STK31Q9BXU1 1019 aa13.85□□□□□ -0.19
GPATCH4-210ENST00000498756 TBC1D2BQ9UPU7 963 aa13.85□□□□□ -0.19
GPATCH4-210ENST00000498756 SUPT16HQ9Y5B9 1047 aaKnown RBP13.85□□□□□ -0.19
GPATCH4-210ENST00000498756 C4BP0C0L5 1744 aa13.84□□□□□ -0.19
GPATCH4-210ENST00000498756 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
GPATCH4-210ENST00000498756 CASZ1Q86V15 1759 aa13.84□□□□□ -0.19
GPATCH4-210ENST00000498756 IL6STP40189 918 aaPredicted RBP13.84□□□□□ -0.19
GPATCH4-210ENST00000498756 BRPF1P55201 1214 aaPredicted RBP13.84□□□□□ -0.19
GPATCH4-210ENST00000498756 FLIIQ13045 1269 aa13.84□□□□□ -0.19
GPATCH4-210ENST00000498756 ARHGEF1Q92888 912 aaKnown RBP13.84□□□□□ -0.19
GPATCH4-210ENST00000498756 HYPKQ9NX55 129 aa13.84□□□□□ -0.19
GPATCH4-210ENST00000498756 ERBB4Q15303 1308 aa13.84□□□□□ -0.19
GPATCH4-210ENST00000498756 F6X3S4 739 aa13.83□□□□□ -0.2
GPATCH4-210ENST00000498756 PHF14O94880 888 aa13.83□□□□□ -0.2
GPATCH4-210ENST00000498756 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
GPATCH4-210ENST00000498756 AK7Q96M32 723 aa13.83□□□□□ -0.2
GPATCH4-210ENST00000498756 MTFR1LQ9H019 292 aa13.83□□□□□ -0.2
GPATCH4-210ENST00000498756 SRP68Q9UHB9 627 aaKnown RBP13.83□□□□□ -0.2
GPATCH4-210ENST00000498756 HLFQ16534 295 aa13.82□□□□□ -0.2
GPATCH4-210ENST00000498756 C20orf194Q5TEA3 1177 aa13.82□□□□□ -0.2
GPATCH4-210ENST00000498756 COL23A1Q86Y22 540 aaPredicted RBP13.82□□□□□ -0.2
GPATCH4-210ENST00000498756 ARXQ96QS3 562 aa13.82□□□□□ -0.2
GPATCH4-210ENST00000498756 BCL2L12Q9HB09 334 aa13.82□□□□□ -0.2
GPATCH4-210ENST00000498756 RTCBQ9Y3I0 505 aaKnown RBP13.82□□□□□ -0.2
GPATCH4-210ENST00000498756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.81□□□□□ -0.2
GPATCH4-210ENST00000498756 PI4KAP2A4QPH2 592 aa13.81□□□□□ -0.2
GPATCH4-210ENST00000498756 MSH5O43196 834 aa13.81□□□□□ -0.2
GPATCH4-210ENST00000498756 PTGER2P43116 358 aa13.81□□□□□ -0.2
GPATCH4-210ENST00000498756 PI4KAP1Q8N8J0 262 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms