RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 RC3H1Q5TC82 1133 aaKnown RBP22.88■■□□□ 1.25
ECHDC2-220ENST00000498544 TSR2Q969E8 191 aaKnown RBP22.88■■□□□ 1.25
ECHDC2-220ENST00000498544 ZBED9Q6R2W3 1325 aa22.87■■□□□ 1.25
ECHDC2-220ENST00000498544 HOXB7P09629 217 aa22.87■■□□□ 1.25
ECHDC2-220ENST00000498544 CRKLP46109 303 aaKnown RBP22.87■■□□□ 1.25
ECHDC2-220ENST00000498544 SLC15A2Q16348 729 aa22.87■■□□□ 1.25
ECHDC2-220ENST00000498544 AK7Q96M32 723 aa22.87■■□□□ 1.25
ECHDC2-220ENST00000498544 SOS1Q07889 1333 aaPredicted RBP22.85■■□□□ 1.25
ECHDC2-220ENST00000498544 E9PSI1 815 aa22.85■■□□□ 1.25
ECHDC2-220ENST00000498544 SPINK5Q9NQ38 1064 aaPredicted RBP22.85■■□□□ 1.25
ECHDC2-220ENST00000498544 CCDC87Q9NVE4 849 aa22.85■■□□□ 1.25
ECHDC2-220ENST00000498544 PRAMEF22A3QJZ6 481 aa22.84■■□□□ 1.25
ECHDC2-220ENST00000498544 TFCP2L1Q9NZI6 479 aa22.84■■□□□ 1.25
ECHDC2-220ENST00000498544 GNPATO15228 680 aa22.83■■□□□ 1.25
ECHDC2-220ENST00000498544 INTS5Q6P9B9 1019 aaKnown RBP22.83■■□□□ 1.25
ECHDC2-220ENST00000498544 USP16Q9Y5T5 823 aa22.83■■□□□ 1.25
ECHDC2-220ENST00000498544 BCORQ6W2J9 1755 aa22.82■■□□□ 1.24
ECHDC2-220ENST00000498544 KRT24Q2M2I5 525 aa22.82■■□□□ 1.24
ECHDC2-220ENST00000498544 SCN7AQ01118 1682 aa22.81■■□□□ 1.24
ECHDC2-220ENST00000498544 SSFA2P28290 1259 aa22.81■■□□□ 1.24
ECHDC2-220ENST00000498544 SLFN5Q08AF3 891 aa22.81■■□□□ 1.24
ECHDC2-220ENST00000498544 DUSP27Q5VZP5 1158 aa22.81■■□□□ 1.24
ECHDC2-220ENST00000498544 ERBB4Q15303 1308 aa22.81■■□□□ 1.24
ECHDC2-220ENST00000498544 COL24A1Q17RW2 1714 aa22.8■■□□□ 1.24
ECHDC2-220ENST00000498544 RPS6KA4O75676 772 aa22.8■■□□□ 1.24
ECHDC2-220ENST00000498544 R3HDM1Q15032 1099 aaKnown RBP22.8■■□□□ 1.24
ECHDC2-220ENST00000498544 FLAD1Q8NFF5 587 aa22.8■■□□□ 1.24
ECHDC2-220ENST00000498544 ZBTB1Q9Y2K1 713 aa22.8■■□□□ 1.24
ECHDC2-220ENST00000498544 RTCBQ9Y3I0 505 aaKnown RBP22.8■■□□□ 1.24
ECHDC2-220ENST00000498544 PNPLA7Q6ZV29 1317 aa22.8■■□□□ 1.24
ECHDC2-220ENST00000498544 PSDA5PKW4 1024 aaPredicted RBP22.79■■□□□ 1.24
ECHDC2-220ENST00000498544 ADRA2BP18089 450 aa22.79■■□□□ 1.24
ECHDC2-220ENST00000498544 C8orf58Q8NAV2 365 aa22.79■■□□□ 1.24
ECHDC2-220ENST00000498544 CHMP4AQ9BY43 222 aa22.79■■□□□ 1.24
ECHDC2-220ENST00000498544 COL15A1P39059 1388 aa22.78■■□□□ 1.24
ECHDC2-220ENST00000498544 TRMT2AQ8IZ69 625 aaKnown RBP22.78■■□□□ 1.24
ECHDC2-220ENST00000498544 CDCA7LQ96GN5 454 aa22.78■■□□□ 1.24
ECHDC2-220ENST00000498544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.77■■□□□ 1.24
ECHDC2-220ENST00000498544 A1BGP04217 495 aa22.77■■□□□ 1.24
ECHDC2-220ENST00000498544 IL6STP40189 918 aaPredicted RBP22.77■■□□□ 1.24
ECHDC2-220ENST00000498544 HDGFL1Q5TGJ6 251 aa22.77■■□□□ 1.24
ECHDC2-220ENST00000498544 AMIGO3Q86WK7 504 aa22.77■■□□□ 1.24
ECHDC2-220ENST00000498544 CANXP27824 592 aaKnown RBP22.76■■□□□ 1.23
ECHDC2-220ENST00000498544 EXOSC9Q06265 439 aaKnown RBP22.76■■□□□ 1.23
ECHDC2-220ENST00000498544 TWISTNBQ3B726 338 aaPredicted RBP22.76■■□□□ 1.23
ECHDC2-220ENST00000498544 ELL2O00472 640 aaPredicted RBP22.75■■□□□ 1.23
ECHDC2-220ENST00000498544 PHF14O94880 888 aa22.75■■□□□ 1.23
ECHDC2-220ENST00000498544 EIF2S2P20042 333 aaKnown RBP22.75■■□□□ 1.23
ECHDC2-220ENST00000498544 TSPYL6Q8N831 410 aa22.75■■□□□ 1.23
ECHDC2-220ENST00000498544 NBPF26B4DH59 902 aa22.74■■□□□ 1.23
ECHDC2-220ENST00000498544 EIF5P55010 431 aaKnown RBP22.74■■□□□ 1.23
ECHDC2-220ENST00000498544 TRAPPC3LQ5T215 181 aa22.74■■□□□ 1.23
ECHDC2-220ENST00000498544 NBPF10Q6P3W6 841 aaKnown RBP22.74■■□□□ 1.23
ECHDC2-220ENST00000498544 NBPF15Q8N660 670 aa22.74■■□□□ 1.23
ECHDC2-220ENST00000498544 NUP98P52948 1817 aa22.73■■□□□ 1.23
ECHDC2-220ENST00000498544 NPM2Q86SE8 214 aaKnown RBP22.72■■□□□ 1.23
ECHDC2-220ENST00000498544 COL23A1Q86Y22 540 aaPredicted RBP22.72■■□□□ 1.23
ECHDC2-220ENST00000498544 DBF4Q9UBU7 674 aaPredicted RBP22.72■■□□□ 1.23
ECHDC2-220ENST00000498544 ANKRD36CQ5JPF3 1778 aa22.71■■□□□ 1.23
ECHDC2-220ENST00000498544 A0A087WZG4 1122 aa22.71■■□□□ 1.23
ECHDC2-220ENST00000498544 PIP4K2AP48426 406 aaPredicted RBP22.71■■□□□ 1.23
ECHDC2-220ENST00000498544 PDIA6Q15084 440 aa22.71■■□□□ 1.23
ECHDC2-220ENST00000498544 CCDC30Q5VVM6 783 aa22.71■■□□□ 1.23
ECHDC2-220ENST00000498544 NECTIN2Q92692 538 aa22.71■■□□□ 1.23
ECHDC2-220ENST00000498544 ARHGEF1Q92888 912 aaKnown RBP22.71■■□□□ 1.23
ECHDC2-220ENST00000498544 DDX21Q9NR30 783 aaKnown RBP eCLIP22.71■■□□□ 1.23
ECHDC2-220ENST00000498544 VAMP4O75379 141 aa22.7■■□□□ 1.22
ECHDC2-220ENST00000498544 RFC4P35249 363 aa22.7■■□□□ 1.22
ECHDC2-220ENST00000498544 SMIM5Q71RC9 77 aa22.7■■□□□ 1.22
ECHDC2-220ENST00000498544 SLC16A10Q8TF71 515 aa22.7■■□□□ 1.22
ECHDC2-220ENST00000498544 CHPF2Q9P2E5 772 aa22.7■■□□□ 1.22
ECHDC2-220ENST00000498544 ZNF330Q9Y3S2 320 aaPredicted RBP22.7■■□□□ 1.22
ECHDC2-220ENST00000498544 ARFGEF2Q9Y6D5 1785 aa22.7■■□□□ 1.22
ECHDC2-220ENST00000498544 USP42Q9H9J4 1324 aaKnown RBP22.69■■□□□ 1.22
ECHDC2-220ENST00000498544 MSH5O43196 834 aa22.69■■□□□ 1.22
ECHDC2-220ENST00000498544 PDGFDQ9GZP0 370 aaPredicted RBP22.69■■□□□ 1.22
ECHDC2-220ENST00000498544 CT47B1P0C2W7 299 aaPredicted RBP22.68■■□□□ 1.22
ECHDC2-220ENST00000498544 MYL6BP14649 208 aa22.68■■□□□ 1.22
ECHDC2-220ENST00000498544 LRP10Q7Z4F1 713 aa22.68■■□□□ 1.22
ECHDC2-220ENST00000498544 LRP5O75197 1615 aa22.68■■□□□ 1.22
ECHDC2-220ENST00000498544 PROSER3Q2NL68 480 aa22.67■■□□□ 1.22
ECHDC2-220ENST00000498544 ZNF428Q96B54 188 aa22.67■■□□□ 1.22
ECHDC2-220ENST00000498544 YTHDC1Q96MU7 727 aaKnown RBP22.67■■□□□ 1.22
ECHDC2-220ENST00000498544 STK31Q9BXU1 1019 aa22.67■■□□□ 1.22
ECHDC2-220ENST00000498544 HYPKQ9NX55 129 aa22.67■■□□□ 1.22
ECHDC2-220ENST00000498544 NARFQ9UHQ1 456 aa22.67■■□□□ 1.22
ECHDC2-220ENST00000498544 ZPR1O75312 459 aa22.66■■□□□ 1.22
ECHDC2-220ENST00000498544 DZIP3Q86Y13 1208 aaKnown RBP22.65■■□□□ 1.22
ECHDC2-220ENST00000498544 MTFR1LQ9H019 292 aa22.65■■□□□ 1.22
ECHDC2-220ENST00000498544 RGL2O15211 777 aa22.64■■□□□ 1.21
ECHDC2-220ENST00000498544 ANXA1P04083 346 aa22.64■■□□□ 1.21
ECHDC2-220ENST00000498544 KIF6Q6ZMV9 814 aa22.63■■□□□ 1.21
ECHDC2-220ENST00000498544 SRP68Q9UHB9 627 aaKnown RBP22.63■■□□□ 1.21
ECHDC2-220ENST00000498544 TBC1D2BQ9UPU7 963 aa22.63■■□□□ 1.21
ECHDC2-220ENST00000498544 AFDNP55196 1824 aaKnown RBP22.62■■□□□ 1.21
ECHDC2-220ENST00000498544 GYS1P13807 737 aa22.62■■□□□ 1.21
ECHDC2-220ENST00000498544 CAMTA2O94983 1202 aa22.61■■□□□ 1.21
ECHDC2-220ENST00000498544 ZBTB7AO95365 584 aa22.61■■□□□ 1.21
ECHDC2-220ENST00000498544 USPL1Q5W0Q7 1092 aa22.61■■□□□ 1.21
ECHDC2-220ENST00000498544 XAGE3Q8WTP9 111 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms