RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 EP400Q96L91 3159 aa25.38■■□□□ 1.65
SCAMP3-209ENST00000497470 ITPK1Q13572 414 aa25.37■■□□□ 1.65
SCAMP3-209ENST00000497470 DNAJC10Q8IXB1 793 aa25.37■■□□□ 1.65
SCAMP3-209ENST00000497470 DDX21Q9NR30 783 aaKnown RBP eCLIP25.37■■□□□ 1.65
SCAMP3-209ENST00000497470 COL5A3P25940 1745 aaPredicted RBP25.36■■□□□ 1.65
SCAMP3-209ENST00000497470 RREB1Q92766 1687 aa25.36■■□□□ 1.65
SCAMP3-209ENST00000497470 RARSP54136 660 aaKnown RBP25.35■■□□□ 1.65
SCAMP3-209ENST00000497470 STK31Q9BXU1 1019 aa25.35■■□□□ 1.65
SCAMP3-209ENST00000497470 ELL2O00472 640 aaPredicted RBP25.34■■□□□ 1.65
SCAMP3-209ENST00000497470 CENPBP07199 599 aaPredicted RBP25.34■■□□□ 1.65
SCAMP3-209ENST00000497470 LRRC4BQ9NT99 713 aa25.34■■□□□ 1.65
SCAMP3-209ENST00000497470 HYPKQ9NX55 129 aa25.34■■□□□ 1.65
SCAMP3-209ENST00000497470 TAF1LQ8IZX4 1826 aa25.33■■□□□ 1.65
SCAMP3-209ENST00000497470 IL6STP40189 918 aaPredicted RBP25.33■■□□□ 1.65
SCAMP3-209ENST00000497470 ILDR2Q71H61 639 aa25.33■■□□□ 1.65
SCAMP3-209ENST00000497470 CCDC87Q9NVE4 849 aa25.33■■□□□ 1.65
SCAMP3-209ENST00000497470 PRAMEF22A3QJZ6 481 aa25.32■■□□□ 1.64
SCAMP3-209ENST00000497470 RGL2O15211 777 aa25.32■■□□□ 1.64
SCAMP3-209ENST00000497470 PDIA6Q15084 440 aa25.32■■□□□ 1.64
SCAMP3-209ENST00000497470 RCAN3Q9UKA8 241 aa25.32■■□□□ 1.64
SCAMP3-209ENST00000497470 CRKLP46109 303 aaKnown RBP25.31■■□□□ 1.64
SCAMP3-209ENST00000497470 INTS5Q6P9B9 1019 aaKnown RBP25.31■■□□□ 1.64
SCAMP3-209ENST00000497470 LINC00116Q8NCU8 138 aa25.31■■□□□ 1.64
SCAMP3-209ENST00000497470 EIF2S2P20042 333 aaKnown RBP25.3■■□□□ 1.64
SCAMP3-209ENST00000497470 EN1Q05925 392 aaPredicted RBP25.3■■□□□ 1.64
SCAMP3-209ENST00000497470 LRP10Q7Z4F1 713 aa25.3■■□□□ 1.64
SCAMP3-209ENST00000497470 RPS6KA4O75676 772 aa25.29■■□□□ 1.64
SCAMP3-209ENST00000497470 ADRA2BP18089 450 aa25.29■■□□□ 1.64
SCAMP3-209ENST00000497470 SSH1Q8WYL5 1049 aa25.29■■□□□ 1.64
SCAMP3-209ENST00000497470 ARHGAP45Q92619 1136 aa25.29■■□□□ 1.64
SCAMP3-209ENST00000497470 KIF16BQ96L93 1317 aa25.29■■□□□ 1.64
SCAMP3-209ENST00000497470 EIF5P55010 431 aaKnown RBP25.28■■□□□ 1.64
SCAMP3-209ENST00000497470 C4BP0C0L5 1744 aa25.28■■□□□ 1.64
SCAMP3-209ENST00000497470 NBPF26B4DH59 902 aa25.27■■□□□ 1.64
SCAMP3-209ENST00000497470 A1BGP04217 495 aa25.27■■□□□ 1.64
SCAMP3-209ENST00000497470 EZH2Q15910 746 aaKnown RBP25.27■■□□□ 1.64
SCAMP3-209ENST00000497470 NBPF14Q5TI25 921 aa25.27■■□□□ 1.64
SCAMP3-209ENST00000497470 NBPF10Q6P3W6 841 aaKnown RBP25.27■■□□□ 1.64
SCAMP3-209ENST00000497470 MRPL50Q8N5N7 158 aaKnown RBP25.27■■□□□ 1.64
SCAMP3-209ENST00000497470 NBPF15Q8N660 670 aa25.27■■□□□ 1.64
SCAMP3-209ENST00000497470 CHPF2Q9P2E5 772 aa25.27■■□□□ 1.64
SCAMP3-209ENST00000497470 A0A087WZG4 1122 aa25.26■■□□□ 1.63
SCAMP3-209ENST00000497470 SLC4A2P04920 1241 aa25.26■■□□□ 1.63
SCAMP3-209ENST00000497470 FLAD1Q8NFF5 587 aa25.26■■□□□ 1.63
SCAMP3-209ENST00000497470 PTPRCP08575 1304 aa25.26■■□□□ 1.63
SCAMP3-209ENST00000497470 AKT1S1Q96B36 256 aa25.25■■□□□ 1.63
SCAMP3-209ENST00000497470 SMC4Q9NTJ3 1288 aa25.25■■□□□ 1.63
SCAMP3-209ENST00000497470 ZBTB1Q9Y2K1 713 aa25.25■■□□□ 1.63
SCAMP3-209ENST00000497470 MYH14Q7Z406 1995 aaKnown RBP25.25■■□□□ 1.63
SCAMP3-209ENST00000497470 IPO8O15397 1037 aaKnown RBP25.24■■□□□ 1.63
SCAMP3-209ENST00000497470 SSFA2P28290 1259 aa25.24■■□□□ 1.63
SCAMP3-209ENST00000497470 RTCBQ9Y3I0 505 aaKnown RBP25.24■■□□□ 1.63
SCAMP3-209ENST00000497470 DEFB132Q7Z7B7 95 aa25.23■■□□□ 1.63
SCAMP3-209ENST00000497470 AK7Q96M32 723 aa25.23■■□□□ 1.63
SCAMP3-209ENST00000497470 NPM2Q86SE8 214 aaKnown RBP25.22■■□□□ 1.63
SCAMP3-209ENST00000497470 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.22■■□□□ 1.63
SCAMP3-209ENST00000497470 RNF123Q5XPI4 1314 aa25.21■■□□□ 1.63
SCAMP3-209ENST00000497470 DDX58O95786 925 aaKnown RBP25.21■■□□□ 1.63
SCAMP3-209ENST00000497470 FLIIQ13045 1269 aa25.21■■□□□ 1.63
SCAMP3-209ENST00000497470 ERVV-1B6SEH8 477 aa25.2■■□□□ 1.62
SCAMP3-209ENST00000497470 MS4A1P11836 297 aa25.2■■□□□ 1.62
SCAMP3-209ENST00000497470 NUP188Q5SRE5 1749 aa25.2■■□□□ 1.62
SCAMP3-209ENST00000497470 IBTKQ9P2D0 1353 aaPredicted RBP25.19■■□□□ 1.62
SCAMP3-209ENST00000497470 CANXP27824 592 aaKnown RBP25.19■■□□□ 1.62
SCAMP3-209ENST00000497470 KCNQ4P56696 695 aa25.19■■□□□ 1.62
SCAMP3-209ENST00000497470 NECTIN2Q92692 538 aa25.19■■□□□ 1.62
SCAMP3-209ENST00000497470 QSER1Q2KHR3 1735 aa25.18■■□□□ 1.62
SCAMP3-209ENST00000497470 GNPATO15228 680 aa25.18■■□□□ 1.62
SCAMP3-209ENST00000497470 SLC15A2Q16348 729 aa25.18■■□□□ 1.62
SCAMP3-209ENST00000497470 PROSER3Q2NL68 480 aa25.18■■□□□ 1.62
SCAMP3-209ENST00000497470 API5Q9BZZ5 524 aaKnown RBP25.18■■□□□ 1.62
SCAMP3-209ENST00000497470 STK32BQ9NY57 414 aa25.18■■□□□ 1.62
SCAMP3-209ENST00000497470 COL15A1P39059 1388 aa25.18■■□□□ 1.62
SCAMP3-209ENST00000497470 UBR3Q6ZT12 1888 aa25.17■■□□□ 1.62
SCAMP3-209ENST00000497470 BCAR3O75815 825 aa25.17■■□□□ 1.62
SCAMP3-209ENST00000497470 CLEC4GQ6UXB4 293 aa25.17■■□□□ 1.62
SCAMP3-209ENST00000497470 COPS6Q7L5N1 327 aa25.17■■□□□ 1.62
SCAMP3-209ENST00000497470 PLBD2Q8NHP8 589 aa25.17■■□□□ 1.62
SCAMP3-209ENST00000497470 MYL6BP14649 208 aa25.16■■□□□ 1.62
SCAMP3-209ENST00000497470 TRAPPC3LQ5T215 181 aa25.16■■□□□ 1.62
SCAMP3-209ENST00000497470 KSR2Q6VAB6 950 aa25.16■■□□□ 1.62
SCAMP3-209ENST00000497470 ANKRD13DQ6ZTN6 518 aa25.16■■□□□ 1.62
SCAMP3-209ENST00000497470 ZKSCAN2Q63HK3 967 aa25.15■■□□□ 1.62
SCAMP3-209ENST00000497470 ATF7IPQ6VMQ6 1270 aa25.15■■□□□ 1.62
SCAMP3-209ENST00000497470 XAGE3Q8WTP9 111 aa25.15■■□□□ 1.62
SCAMP3-209ENST00000497470 PHAXQ9H814 394 aaKnown RBP25.15■■□□□ 1.62
SCAMP3-209ENST00000497470 NARFQ9UHQ1 456 aa25.14■■□□□ 1.62
SCAMP3-209ENST00000497470 NOB1Q9ULX3 412 aaKnown RBP25.14■■□□□ 1.62
SCAMP3-209ENST00000497470 MAP3K15Q6ZN16 1313 aa25.13■■□□□ 1.61
SCAMP3-209ENST00000497470 PDE3AQ14432 1141 aa25.13■■□□□ 1.61
SCAMP3-209ENST00000497470 ZNF827Q17R98 1081 aa25.13■■□□□ 1.61
SCAMP3-209ENST00000497470 KIF6Q6ZMV9 814 aa25.13■■□□□ 1.61
SCAMP3-209ENST00000497470 G2E3Q7L622 706 aa25.13■■□□□ 1.61
SCAMP3-209ENST00000497470 DZIP3Q86Y13 1208 aaKnown RBP25.13■■□□□ 1.61
SCAMP3-209ENST00000497470 TFCP2L1Q9NZI6 479 aa25.13■■□□□ 1.61
SCAMP3-209ENST00000497470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.12■■□□□ 1.61
SCAMP3-209ENST00000497470 ANXA1P04083 346 aa25.12■■□□□ 1.61
SCAMP3-209ENST00000497470 FKBP5Q13451 457 aaPredicted RBP25.12■■□□□ 1.61
SCAMP3-209ENST00000497470 HSP90AB3PQ58FF7 597 aa25.12■■□□□ 1.61
SCAMP3-209ENST00000497470 ARHGEF1Q92888 912 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms