RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 KCNQ4P56696 695 aa12.67□□□□□ -0.38
TCTN3-206ENST00000497399 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
TCTN3-206ENST00000497399 CACNA1FO60840 1977 aa12.67□□□□□ -0.38
TCTN3-206ENST00000497399 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
TCTN3-206ENST00000497399 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
TCTN3-206ENST00000497399 RNF123Q5XPI4 1314 aa12.66□□□□□ -0.38
TCTN3-206ENST00000497399 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
TCTN3-206ENST00000497399 BCAR3O75815 825 aa12.66□□□□□ -0.38
TCTN3-206ENST00000497399 SSH1Q8WYL5 1049 aa12.66□□□□□ -0.38
TCTN3-206ENST00000497399 ZNF496Q96IT1 587 aaPredicted RBP12.66□□□□□ -0.38
TCTN3-206ENST00000497399 ATG3Q9NT62 314 aa12.66□□□□□ -0.38
TCTN3-206ENST00000497399 ZNF784Q8NCA9 323 aaPredicted RBP12.65□□□□□ -0.38
TCTN3-206ENST00000497399 ZNF428Q96B54 188 aa12.65□□□□□ -0.38
TCTN3-206ENST00000497399 SYTL4Q96C24 671 aaPredicted RBP12.65□□□□□ -0.38
TCTN3-206ENST00000497399 ASAP1Q9ULH1 1129 aa12.65□□□□□ -0.38
TCTN3-206ENST00000497399 UBR3Q6ZT12 1888 aa12.65□□□□□ -0.38
TCTN3-206ENST00000497399 SOS1Q07889 1333 aaPredicted RBP12.64□□□□□ -0.39
TCTN3-206ENST00000497399 PRAMEF22A3QJZ6 481 aa12.64□□□□□ -0.39
TCTN3-206ENST00000497399 GIGYF1O75420 1035 aaPredicted RBP12.64□□□□□ -0.39
TCTN3-206ENST00000497399 HOXB7P09629 217 aa12.64□□□□□ -0.39
TCTN3-206ENST00000497399 ALDH1L2Q3SY69 923 aa12.64□□□□□ -0.39
TCTN3-206ENST00000497399 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
TCTN3-206ENST00000497399 ARXQ96QS3 562 aa12.64□□□□□ -0.39
TCTN3-206ENST00000497399 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
TCTN3-206ENST00000497399 TJP1Q07157 1748 aa12.63□□□□□ -0.39
TCTN3-206ENST00000497399 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
TCTN3-206ENST00000497399 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
TCTN3-206ENST00000497399 FMNL2Q96PY5 1086 aa12.63□□□□□ -0.39
TCTN3-206ENST00000497399 CICQ96RK0 1608 aaPredicted RBP12.62□□□□□ -0.39
TCTN3-206ENST00000497399 RRP1P56182 461 aaKnown RBP12.62□□□□□ -0.39
TCTN3-206ENST00000497399 SLC27A3Q5K4L6 730 aa12.62□□□□□ -0.39
TCTN3-206ENST00000497399 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
TCTN3-206ENST00000497399 PTCD1O75127 700 aaKnown RBP12.61□□□□□ -0.39
TCTN3-206ENST00000497399 BRPF1P55201 1214 aaPredicted RBP12.61□□□□□ -0.39
TCTN3-206ENST00000497399 HDGFL1Q5TGJ6 251 aa12.61□□□□□ -0.39
TCTN3-206ENST00000497399 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
TCTN3-206ENST00000497399 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
TCTN3-206ENST00000497399 PLIN1O60240 522 aa12.6□□□□□ -0.39
TCTN3-206ENST00000497399 SNRPA1P09661 255 aaKnown RBP12.6□□□□□ -0.39
TCTN3-206ENST00000497399 EIF2S2P20042 333 aaKnown RBP12.6□□□□□ -0.39
TCTN3-206ENST00000497399 SLC16A10Q8TF71 515 aa12.6□□□□□ -0.39
TCTN3-206ENST00000497399 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
TCTN3-206ENST00000497399 USP16Q9Y5T5 823 aa12.6□□□□□ -0.39
TCTN3-206ENST00000497399 CCDC30Q5VVM6 783 aa12.59□□□□□ -0.39
TCTN3-206ENST00000497399 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
TCTN3-206ENST00000497399 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
TCTN3-206ENST00000497399 C4BP0C0L5 1744 aa12.59□□□□□ -0.39
TCTN3-206ENST00000497399 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
TCTN3-206ENST00000497399 PALLDQ8WX93 1383 aa12.58□□□□□ -0.4
TCTN3-206ENST00000497399 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
TCTN3-206ENST00000497399 SLC4A2P04920 1241 aa12.58□□□□□ -0.4
TCTN3-206ENST00000497399 PDIA6Q15084 440 aa12.58□□□□□ -0.4
TCTN3-206ENST00000497399 G2E3Q7L622 706 aa12.58□□□□□ -0.4
TCTN3-206ENST00000497399 AMIGO3Q86WK7 504 aa12.58□□□□□ -0.4
TCTN3-206ENST00000497399 COL23A1Q86Y22 540 aaPredicted RBP12.58□□□□□ -0.4
TCTN3-206ENST00000497399 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
TCTN3-206ENST00000497399 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
TCTN3-206ENST00000497399 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.4
TCTN3-206ENST00000497399 TNNQ9UQP3 1299 aa12.58□□□□□ -0.4
TCTN3-206ENST00000497399 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
TCTN3-206ENST00000497399 FRAT1Q92837 279 aaPredicted RBP12.57□□□□□ -0.4
TCTN3-206ENST00000497399 CHPF2Q9P2E5 772 aa12.57□□□□□ -0.4
TCTN3-206ENST00000497399 NOB1Q9ULX3 412 aaKnown RBP12.57□□□□□ -0.4
TCTN3-206ENST00000497399 MYH14Q7Z406 1995 aaKnown RBP12.57□□□□□ -0.4
TCTN3-206ENST00000497399 KIF16BQ96L93 1317 aa12.57□□□□□ -0.4
TCTN3-206ENST00000497399 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
TCTN3-206ENST00000497399 ANXA1P04083 346 aa12.56□□□□□ -0.4
TCTN3-206ENST00000497399 SIK1P57059 783 aa12.56□□□□□ -0.4
TCTN3-206ENST00000497399 IRX6P78412 446 aaPredicted RBP12.56□□□□□ -0.4
TCTN3-206ENST00000497399 PROSER3Q2NL68 480 aa12.56□□□□□ -0.4
TCTN3-206ENST00000497399 C20orf194Q5TEA3 1177 aa12.56□□□□□ -0.4
TCTN3-206ENST00000497399 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
TCTN3-206ENST00000497399 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.56□□□□□ -0.4
TCTN3-206ENST00000497399 STK31Q9BXU1 1019 aa12.56□□□□□ -0.4
TCTN3-206ENST00000497399 CHMP4AQ9BY43 222 aa12.56□□□□□ -0.4
TCTN3-206ENST00000497399 NBPF26B4DH59 902 aa12.55□□□□□ -0.4
TCTN3-206ENST00000497399 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
TCTN3-206ENST00000497399 ITPK1Q13572 414 aa12.55□□□□□ -0.4
TCTN3-206ENST00000497399 NBPF10Q6P3W6 841 aaKnown RBP12.55□□□□□ -0.4
TCTN3-206ENST00000497399 LRP10Q7Z4F1 713 aa12.55□□□□□ -0.4
TCTN3-206ENST00000497399 NBPF15Q8N660 670 aa12.55□□□□□ -0.4
TCTN3-206ENST00000497399 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
TCTN3-206ENST00000497399 PHAXQ9H814 394 aaKnown RBP12.55□□□□□ -0.4
TCTN3-206ENST00000497399 DDX21Q9NR30 783 aaKnown RBP eCLIP12.55□□□□□ -0.4
TCTN3-206ENST00000497399 DBF4Q9UBU7 674 aaPredicted RBP12.55□□□□□ -0.4
TCTN3-206ENST00000497399 ERBB4Q15303 1308 aa12.55□□□□□ -0.4
TCTN3-206ENST00000497399 KIF13BQ9NQT8 1826 aa12.55□□□□□ -0.4
TCTN3-206ENST00000497399 A1BGP04217 495 aa12.54□□□□□ -0.4
TCTN3-206ENST00000497399 CYP19A1P11511 503 aaPredicted RBP12.54□□□□□ -0.4
TCTN3-206ENST00000497399 TRIM27P14373 513 aa12.54□□□□□ -0.4
TCTN3-206ENST00000497399 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
TCTN3-206ENST00000497399 PIP4K2AP48426 406 aaPredicted RBP12.54□□□□□ -0.4
TCTN3-206ENST00000497399 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
TCTN3-206ENST00000497399 ARHGAP45Q92619 1136 aa12.54□□□□□ -0.4
TCTN3-206ENST00000497399 TFCP2L1Q9NZI6 479 aa12.54□□□□□ -0.4
TCTN3-206ENST00000497399 CCNL1Q9UK58 526 aaPredicted RBP12.54□□□□□ -0.4
TCTN3-206ENST00000497399 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
TCTN3-206ENST00000497399 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
TCTN3-206ENST00000497399 RLBP1P12271 317 aa12.53□□□□□ -0.4
TCTN3-206ENST00000497399 CANXP27824 592 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms