RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 CUEDC1Q9NWM3 386 aaPredicted RBP9.67□□□□□ -0.86
SNX13-211ENST00000496855 HINFPQ9BQA5 517 aa9.66□□□□□ -0.86
SNX13-211ENST00000496855 MSX1P28360 303 aa9.66□□□□□ -0.86
SNX13-211ENST00000496855 TEAD4Q15561 434 aa9.66□□□□□ -0.86
SNX13-211ENST00000496855 TRIM22Q8IYM9 498 aa9.66□□□□□ -0.86
SNX13-211ENST00000496855 ZDHHC1Q8WTX9 485 aa9.66□□□□□ -0.86
SNX13-211ENST00000496855 GPAMQ9HCL2 828 aa9.66□□□□□ -0.86
SNX13-211ENST00000496855 ZMIZ1Q9ULJ6 1067 aa9.66□□□□□ -0.86
SNX13-211ENST00000496855 CDC14CA4D256 554 aa9.65□□□□□ -0.87
SNX13-211ENST00000496855 VWA5B2Q8N398 1253 aa9.65□□□□□ -0.87
SNX13-211ENST00000496855 AIDAQ96BJ3 306 aa9.65□□□□□ -0.87
SNX13-211ENST00000496855 GMCL1Q96IK5 515 aa9.65□□□□□ -0.87
SNX13-211ENST00000496855 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.87
SNX13-211ENST00000496855 H7C1W4 665 aa9.64□□□□□ -0.87
SNX13-211ENST00000496855 C21orf2O43822 256 aa9.64□□□□□ -0.87
SNX13-211ENST00000496855 NOS2P35228 1153 aa9.64□□□□□ -0.87
SNX13-211ENST00000496855 PSMA6P60900 246 aaKnown RBP9.64□□□□□ -0.87
SNX13-211ENST00000496855 DBN1Q16643 649 aa9.64□□□□□ -0.87
SNX13-211ENST00000496855 NBPF1Q3BBV0 1214 aa9.64□□□□□ -0.87
SNX13-211ENST00000496855 SV2AQ7L0J3 742 aa9.64□□□□□ -0.87
SNX13-211ENST00000496855 C1orf216Q8TAB5 229 aa9.64□□□□□ -0.87
SNX13-211ENST00000496855 STK32AQ8WU08 396 aa9.64□□□□□ -0.87
SNX13-211ENST00000496855 L3MBTL2Q969R5 705 aa9.64□□□□□ -0.87
SNX13-211ENST00000496855 LGR5O75473 907 aa9.63□□□□□ -0.87
SNX13-211ENST00000496855 PPP1R15AO75807 674 aaPredicted RBP9.63□□□□□ -0.87
SNX13-211ENST00000496855 SCG3Q8WXD2 468 aaKnown RBP9.63□□□□□ -0.87
SNX13-211ENST00000496855 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
SNX13-211ENST00000496855 ARID3AQ99856 593 aa9.63□□□□□ -0.87
SNX13-211ENST00000496855 ZDHHC3Q9NYG2 299 aa9.63□□□□□ -0.87
SNX13-211ENST00000496855 ATAD2Q6PL18 1390 aa9.63□□□□□ -0.87
SNX13-211ENST00000496855 SERTM1A2A2V5 107 aa9.62□□□□□ -0.87
SNX13-211ENST00000496855 PPP1R12BO60237 982 aaPredicted RBP9.62□□□□□ -0.87
SNX13-211ENST00000496855 ATP4AP20648 1035 aa9.62□□□□□ -0.87
SNX13-211ENST00000496855 GPR161Q8N6U8 529 aaKnown RBP9.62□□□□□ -0.87
SNX13-211ENST00000496855 GAS2L2Q8NHY3 880 aa9.62□□□□□ -0.87
SNX13-211ENST00000496855 ZNF232Q9UNY5 417 aa9.62□□□□□ -0.87
SNX13-211ENST00000496855 CHMP3Q9Y3E7 222 aa9.62□□□□□ -0.87
SNX13-211ENST00000496855 ACIN1Q9UKV3 1341 aaKnown RBP9.62□□□□□ -0.87
SNX13-211ENST00000496855 EML1O00423 815 aa9.61□□□□□ -0.87
SNX13-211ENST00000496855 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
SNX13-211ENST00000496855 GMPRP36959 345 aa9.61□□□□□ -0.87
SNX13-211ENST00000496855 SH3PXD2AQ5TCZ1 1133 aa9.61□□□□□ -0.87
SNX13-211ENST00000496855 POTEAQ6S8J7 498 aa9.61□□□□□ -0.87
SNX13-211ENST00000496855 PGBD3Q8N328 593 aa9.61□□□□□ -0.87
SNX13-211ENST00000496855 NUCKS1Q9H1E3 243 aaKnown RBP9.61□□□□□ -0.87
SNX13-211ENST00000496855 RUBCNLQ9H714 662 aa9.61□□□□□ -0.87
SNX13-211ENST00000496855 TATP17735 454 aaPredicted RBP9.6□□□□□ -0.87
SNX13-211ENST00000496855 TXLNAP40222 546 aa9.6□□□□□ -0.87
SNX13-211ENST00000496855 SWI5Q1ZZU3 235 aa9.6□□□□□ -0.87
SNX13-211ENST00000496855 CRISPLD1Q9H336 500 aa9.6□□□□□ -0.87
SNX13-211ENST00000496855 THBS1P07996 1170 aa9.59□□□□□ -0.87
SNX13-211ENST00000496855 IGFBP4P22692 258 aa9.59□□□□□ -0.87
SNX13-211ENST00000496855 HIRAP54198 1017 aaPredicted RBP9.59□□□□□ -0.87
SNX13-211ENST00000496855 FAM69CQ0P6D2 419 aa9.59□□□□□ -0.87
SNX13-211ENST00000496855 LBRQ14739 615 aaKnown RBP9.59□□□□□ -0.87
SNX13-211ENST00000496855 TMEM164Q5U3C3 297 aa9.59□□□□□ -0.87
SNX13-211ENST00000496855 STAG2Q8N3U4 1231 aa9.59□□□□□ -0.87
SNX13-211ENST00000496855 WEE1P30291 646 aa9.59□□□□□ -0.87
SNX13-211ENST00000496855 CHMP7Q8WUX9 453 aaPredicted RBP9.59□□□□□ -0.87
SNX13-211ENST00000496855 GTPBP3Q969Y2 492 aaKnown RBP9.59□□□□□ -0.87
SNX13-211ENST00000496855 C2orf49Q9BVC5 232 aaPredicted RBP9.59□□□□□ -0.87
SNX13-211ENST00000496855 ARSJQ5FYB0 599 aaPredicted RBP9.58□□□□□ -0.88
SNX13-211ENST00000496855 EFHC2Q5JST6 749 aa9.58□□□□□ -0.88
SNX13-211ENST00000496855 WIPF1O43516 503 aa9.57□□□□□ -0.88
SNX13-211ENST00000496855 FOXR1Q6PIV2 292 aa9.57□□□□□ -0.88
SNX13-211ENST00000496855 HCN4Q9Y3Q4 1203 aa9.57□□□□□ -0.88
SNX13-211ENST00000496855 A0A1W2PNR3 127 aa9.56□□□□□ -0.88
SNX13-211ENST00000496855 ZIC5Q96T25 663 aa9.56□□□□□ -0.88
SNX13-211ENST00000496855 COL25A1Q9BXS0 654 aaPredicted RBP9.56□□□□□ -0.88
SNX13-211ENST00000496855 GPR25O00155 361 aa9.55□□□□□ -0.88
SNX13-211ENST00000496855 UBAP2LQ14157 1087 aaKnown RBP9.55□□□□□ -0.88
SNX13-211ENST00000496855 C1orf53Q5VUE5 145 aa9.55□□□□□ -0.88
SNX13-211ENST00000496855 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
SNX13-211ENST00000496855 NLRP8Q86W28 1048 aa9.55□□□□□ -0.88
SNX13-211ENST00000496855 C7orf43Q8WVR3 580 aa9.55□□□□□ -0.88
SNX13-211ENST00000496855 PHACTR1Q9C0D0 580 aa9.55□□□□□ -0.88
SNX13-211ENST00000496855 FOXO3O43524 673 aa9.54□□□□□ -0.88
SNX13-211ENST00000496855 PRMT3O60678 531 aa9.54□□□□□ -0.88
SNX13-211ENST00000496855 CLP1Q92989 425 aaKnown RBP9.54□□□□□ -0.88
SNX13-211ENST00000496855 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
SNX13-211ENST00000496855 TRERF1Q96PN7 1200 aa9.54□□□□□ -0.88
SNX13-211ENST00000496855 GPC6Q9Y625 555 aaPredicted RBP9.54□□□□□ -0.88
SNX13-211ENST00000496855 KRT76Q01546 638 aa9.53□□□□□ -0.88
SNX13-211ENST00000496855 OCLNQ16625 522 aa9.53□□□□□ -0.88
SNX13-211ENST00000496855 RNFT1Q5M7Z0 435 aa9.53□□□□□ -0.88
SNX13-211ENST00000496855 ALDH16A1Q8IZ83 802 aa9.53□□□□□ -0.88
SNX13-211ENST00000496855 GAS6Q14393 721 aa9.53□□□□□ -0.88
SNX13-211ENST00000496855 FIGNL1Q6PIW4 674 aa9.53□□□□□ -0.88
SNX13-211ENST00000496855 RHPN1Q8TCX5 695 aa9.53□□□□□ -0.88
SNX13-211ENST00000496855 CNTNAP3BQ96NU0 1288 aa9.53□□□□□ -0.88
SNX13-211ENST00000496855 CNTNAP3Q9BZ76 1288 aa9.53□□□□□ -0.88
SNX13-211ENST00000496855 ZCCHC2Q9C0B9 1178 aaKnown RBP9.53□□□□□ -0.88
SNX13-211ENST00000496855 NGLY1Q96IV0 654 aa9.52□□□□□ -0.89
SNX13-211ENST00000496855 CFHR5Q9BXR6 569 aa9.52□□□□□ -0.89
SNX13-211ENST00000496855 GJA3Q9Y6H8 435 aa9.52□□□□□ -0.89
SNX13-211ENST00000496855 FKBP5Q13451 457 aaPredicted RBP9.51□□□□□ -0.89
SNX13-211ENST00000496855 VTI1AQ96AJ9 217 aa9.51□□□□□ -0.89
SNX13-211ENST00000496855 KLRG1Q96E93 195 aa9.51□□□□□ -0.89
SNX13-211ENST00000496855 NDFIP2Q9NV92 336 aa9.51□□□□□ -0.89
SNX13-211ENST00000496855 PHF24Q9UPV7 400 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms