RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 SSH1Q8WYL5 1049 aa17.94■□□□□ 0.46
ATPAF2-208ENST00000496852 NECTIN2Q92692 538 aa17.94■□□□□ 0.46
ATPAF2-208ENST00000496852 CHMP4AQ9BY43 222 aa17.94■□□□□ 0.46
ATPAF2-208ENST00000496852 TUBGCP6Q96RT7 1819 aa17.94■□□□□ 0.46
ATPAF2-208ENST00000496852 SLC27A3Q5K4L6 730 aa17.93■□□□□ 0.46
ATPAF2-208ENST00000496852 PROM2Q8N271 834 aa17.93■□□□□ 0.46
ATPAF2-208ENST00000496852 TCERG1O14776 1098 aaKnown RBP17.93■□□□□ 0.46
ATPAF2-208ENST00000496852 KCNQ4P56696 695 aa17.93■□□□□ 0.46
ATPAF2-208ENST00000496852 TXNRD1Q16881 649 aa17.93■□□□□ 0.46
ATPAF2-208ENST00000496852 CCDC125Q86Z20 511 aa17.93■□□□□ 0.46
ATPAF2-208ENST00000496852 LRRC4BQ9NT99 713 aa17.93■□□□□ 0.46
ATPAF2-208ENST00000496852 ERBB4Q15303 1308 aa17.92■□□□□ 0.46
ATPAF2-208ENST00000496852 STARD3NLO95772 234 aa17.92■□□□□ 0.46
ATPAF2-208ENST00000496852 BCAR3O75815 825 aa17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 BRPF1P55201 1214 aaPredicted RBP17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 SF3B2Q13435 895 aaKnown RBP17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 PDIA6Q15084 440 aa17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 ILDR2Q71H61 639 aa17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 MRPL50Q8N5N7 158 aaKnown RBP17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 LINC00116Q8NCU8 138 aa17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 BCL2L13Q9BXK5 485 aa17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 SMC4Q9NTJ3 1288 aa17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 CHPF2Q9P2E5 772 aa17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
ATPAF2-208ENST00000496852 A1BGP04217 495 aa17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 CAMKK2Q96RR4 588 aa17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 STK31Q9BXU1 1019 aa17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 DDX21Q9NR30 783 aaKnown RBP eCLIP17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 ARFGEF2Q9Y6D5 1785 aa17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 C4AP0C0L4 1744 aa17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 N4BP2Q86UW6 1770 aaPredicted RBP17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 NBPF26B4DH59 902 aa17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 NBPF10Q6P3W6 841 aaKnown RBP17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 NBPF15Q8N660 670 aa17.9■□□□□ 0.46
ATPAF2-208ENST00000496852 QSER1Q2KHR3 1735 aa17.89■□□□□ 0.45
ATPAF2-208ENST00000496852 SLC4A2P04920 1241 aa17.89■□□□□ 0.45
ATPAF2-208ENST00000496852 CRKLP46109 303 aaKnown RBP17.89■□□□□ 0.45
ATPAF2-208ENST00000496852 BAG6P46379 1132 aa17.89■□□□□ 0.45
ATPAF2-208ENST00000496852 EN1Q05925 392 aaPredicted RBP17.89■□□□□ 0.45
ATPAF2-208ENST00000496852 PROSER3Q2NL68 480 aa17.89■□□□□ 0.45
ATPAF2-208ENST00000496852 INTS5Q6P9B9 1019 aaKnown RBP17.89■□□□□ 0.45
ATPAF2-208ENST00000496852 LRP10Q7Z4F1 713 aa17.89■□□□□ 0.45
ATPAF2-208ENST00000496852 CNTNAP4Q9C0A0 1308 aa17.89■□□□□ 0.45
ATPAF2-208ENST00000496852 NUP98P52948 1817 aa17.88■□□□□ 0.45
ATPAF2-208ENST00000496852 ANXA1P04083 346 aa17.88■□□□□ 0.45
ATPAF2-208ENST00000496852 PIP4K2AP48426 406 aaPredicted RBP17.88■□□□□ 0.45
ATPAF2-208ENST00000496852 EZH2Q15910 746 aaKnown RBP17.88■□□□□ 0.45
ATPAF2-208ENST00000496852 UPF1Q92900 1129 aaKnown RBP eCLIP17.88■□□□□ 0.45
ATPAF2-208ENST00000496852 CCDC87Q9NVE4 849 aa17.88■□□□□ 0.45
ATPAF2-208ENST00000496852 ZBTB1Q9Y2K1 713 aa17.88■□□□□ 0.45
ATPAF2-208ENST00000496852 BCORQ6W2J9 1755 aa17.88■□□□□ 0.45
ATPAF2-208ENST00000496852 RC3H1Q5TC82 1133 aaKnown RBP17.87■□□□□ 0.45
ATPAF2-208ENST00000496852 SUPT16HQ9Y5B9 1047 aaKnown RBP17.87■□□□□ 0.45
ATPAF2-208ENST00000496852 G2E3Q7L622 706 aa17.87■□□□□ 0.45
ATPAF2-208ENST00000496852 DEFB132Q7Z7B7 95 aa17.87■□□□□ 0.45
ATPAF2-208ENST00000496852 HYPKQ9NX55 129 aa17.87■□□□□ 0.45
ATPAF2-208ENST00000496852 ANKRD36CQ5JPF3 1778 aa17.86■□□□□ 0.45
ATPAF2-208ENST00000496852 MYL6BP14649 208 aa17.86■□□□□ 0.45
ATPAF2-208ENST00000496852 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
ATPAF2-208ENST00000496852 PHAXQ9H814 394 aaKnown RBP17.86■□□□□ 0.45
ATPAF2-208ENST00000496852 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
ATPAF2-208ENST00000496852 HMGB2P26583 209 aaKnown RBP17.85■□□□□ 0.45
ATPAF2-208ENST00000496852 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
ATPAF2-208ENST00000496852 IL6STP40189 918 aaPredicted RBP17.84■□□□□ 0.45
ATPAF2-208ENST00000496852 AFDNP55196 1824 aaKnown RBP17.84■□□□□ 0.45
ATPAF2-208ENST00000496852 SCN7AQ01118 1682 aa17.84■□□□□ 0.45
ATPAF2-208ENST00000496852 EIF5P55010 431 aaKnown RBP17.83■□□□□ 0.45
ATPAF2-208ENST00000496852 FLIIQ13045 1269 aa17.83■□□□□ 0.45
ATPAF2-208ENST00000496852 NOB1Q9ULX3 412 aaKnown RBP17.83■□□□□ 0.45
ATPAF2-208ENST00000496852 PTPRCP08575 1304 aa17.82■□□□□ 0.44
ATPAF2-208ENST00000496852 RPS6KA4O75676 772 aa17.82■□□□□ 0.44
ATPAF2-208ENST00000496852 FRAT1Q92837 279 aaPredicted RBP17.82■□□□□ 0.44
ATPAF2-208ENST00000496852 RRP1P56182 461 aaKnown RBP17.81■□□□□ 0.44
ATPAF2-208ENST00000496852 COPS6Q7L5N1 327 aa17.81■□□□□ 0.44
ATPAF2-208ENST00000496852 XAGE3Q8WTP9 111 aa17.81■□□□□ 0.44
ATPAF2-208ENST00000496852 ARHGAP45Q92619 1136 aa17.81■□□□□ 0.44
ATPAF2-208ENST00000496852 AKT1S1Q96B36 256 aa17.81■□□□□ 0.44
ATPAF2-208ENST00000496852 COL15A1P39059 1388 aa17.81■□□□□ 0.44
ATPAF2-208ENST00000496852 GNPATO15228 680 aa17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 ZKSCAN2Q63HK3 967 aa17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 AK7Q96M32 723 aa17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 IPO8O15397 1037 aaKnown RBP17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 PLIN1O60240 522 aa17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 AIMP1Q12904 312 aaKnown RBP17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 FKBP5Q13451 457 aaPredicted RBP17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 ZNF827Q17R98 1081 aa17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 ATF7IPQ6VMQ6 1270 aa17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 AMIGO3Q86WK7 504 aa17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
ATPAF2-208ENST00000496852 TRIM27P14373 513 aa17.79■□□□□ 0.44
ATPAF2-208ENST00000496852 TTLL7Q6ZT98 887 aa17.79■□□□□ 0.44
ATPAF2-208ENST00000496852 RTCBQ9Y3I0 505 aaKnown RBP17.79■□□□□ 0.44
ATPAF2-208ENST00000496852 ADCY9O60503 1353 aa17.79■□□□□ 0.44
ATPAF2-208ENST00000496852 NEFLP07196 543 aa17.78■□□□□ 0.44
ATPAF2-208ENST00000496852 TNNQ9UQP3 1299 aa17.78■□□□□ 0.44
ATPAF2-208ENST00000496852 API5Q9BZZ5 524 aaKnown RBP17.77■□□□□ 0.44
ATPAF2-208ENST00000496852 PXDNLA1KZ92 1463 aa17.77■□□□□ 0.44
ATPAF2-208ENST00000496852 PI4KAP2A4QPH2 592 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms