RNA–Protein interactions for RNA: ENST00000496775.5

NOP56-218, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-218ENST00000496775 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
NOP56-218ENST00000496775 PAPPAQ13219 1627 aa16.79■□□□□ 0.28
NOP56-218ENST00000496775 SENP3-EIF4A1A0A087X0R7 540 aa16.79■□□□□ 0.28
NOP56-218ENST00000496775 VAMP4O75379 141 aa16.79■□□□□ 0.28
NOP56-218ENST00000496775 CRKLP46109 303 aaKnown RBP16.79■□□□□ 0.28
NOP56-218ENST00000496775 C8orf58Q8NAV2 365 aa16.79■□□□□ 0.28
NOP56-218ENST00000496775 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
NOP56-218ENST00000496775 TFCP2L1Q9NZI6 479 aa16.79■□□□□ 0.28
NOP56-218ENST00000496775 USP16Q9Y5T5 823 aa16.79■□□□□ 0.28
NOP56-218ENST00000496775 TNS1Q9HBL0 1735 aaKnown RBP16.79■□□□□ 0.28
NOP56-218ENST00000496775 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
NOP56-218ENST00000496775 EIF2S2P20042 333 aaKnown RBP16.78■□□□□ 0.28
NOP56-218ENST00000496775 TRAPPC3LQ5T215 181 aa16.78■□□□□ 0.28
NOP56-218ENST00000496775 SLC4A9Q96Q91 983 aa16.78■□□□□ 0.28
NOP56-218ENST00000496775 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
NOP56-218ENST00000496775 LRRC4BQ9NT99 713 aa16.78■□□□□ 0.28
NOP56-218ENST00000496775 CICQ96RK0 1608 aaPredicted RBP16.78■□□□□ 0.28
NOP56-218ENST00000496775 KDM3BQ7LBC6 1761 aa16.77■□□□□ 0.28
NOP56-218ENST00000496775 ITPK1Q13572 414 aa16.77■□□□□ 0.28
NOP56-218ENST00000496775 SLC15A2Q16348 729 aa16.77■□□□□ 0.28
NOP56-218ENST00000496775 SLC16A10Q8TF71 515 aa16.77■□□□□ 0.28
NOP56-218ENST00000496775 EP400Q96L91 3159 aa16.77■□□□□ 0.28
NOP56-218ENST00000496775 UBR2Q8IWV8 1755 aa16.77■□□□□ 0.27
NOP56-218ENST00000496775 LY75O60449 1722 aa16.76■□□□□ 0.27
NOP56-218ENST00000496775 VIRMAQ69YN4 1812 aaKnown RBP16.76■□□□□ 0.27
NOP56-218ENST00000496775 ELL2O00472 640 aaPredicted RBP16.76■□□□□ 0.27
NOP56-218ENST00000496775 LINC00116Q8NCU8 138 aa16.76■□□□□ 0.27
NOP56-218ENST00000496775 AKT1S1Q96B36 256 aa16.76■□□□□ 0.27
NOP56-218ENST00000496775 GNPATO15228 680 aa16.75■□□□□ 0.27
NOP56-218ENST00000496775 IPO8O15397 1037 aaKnown RBP16.75■□□□□ 0.27
NOP56-218ENST00000496775 RFC4P35249 363 aa16.75■□□□□ 0.27
NOP56-218ENST00000496775 BRPF1P55201 1214 aaPredicted RBP16.75■□□□□ 0.27
NOP56-218ENST00000496775 INTS5Q6P9B9 1019 aaKnown RBP16.75■□□□□ 0.27
NOP56-218ENST00000496775 ZNF652Q9Y2D9 606 aa16.75■□□□□ 0.27
NOP56-218ENST00000496775 ZPR1O75312 459 aa16.74■□□□□ 0.27
NOP56-218ENST00000496775 EIF5P55010 431 aaKnown RBP16.74■□□□□ 0.27
NOP56-218ENST00000496775 KIF6Q6ZMV9 814 aa16.74■□□□□ 0.27
NOP56-218ENST00000496775 C5P01031 1676 aa16.73■□□□□ 0.27
NOP56-218ENST00000496775 ERVV-1B6SEH8 477 aa16.73■□□□□ 0.27
NOP56-218ENST00000496775 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
NOP56-218ENST00000496775 MS4A1P11836 297 aa16.73■□□□□ 0.27
NOP56-218ENST00000496775 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
NOP56-218ENST00000496775 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
NOP56-218ENST00000496775 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
NOP56-218ENST00000496775 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.73■□□□□ 0.27
NOP56-218ENST00000496775 PTPRCP08575 1304 aa16.72■□□□□ 0.27
NOP56-218ENST00000496775 KIF16BQ96L93 1317 aa16.72■□□□□ 0.27
NOP56-218ENST00000496775 A1BGP04217 495 aa16.72■□□□□ 0.27
NOP56-218ENST00000496775 HSP90AB3PQ58FF7 597 aa16.72■□□□□ 0.27
NOP56-218ENST00000496775 NLGN1Q8N2Q7 840 aa16.71■□□□□ 0.27
NOP56-218ENST00000496775 ARHGAP45Q92619 1136 aa16.71■□□□□ 0.27
NOP56-218ENST00000496775 CHPF2Q9P2E5 772 aa16.71■□□□□ 0.27
NOP56-218ENST00000496775 ZBTB1Q9Y2K1 713 aa16.71■□□□□ 0.27
NOP56-218ENST00000496775 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.7■□□□□ 0.26
NOP56-218ENST00000496775 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
NOP56-218ENST00000496775 KRT24Q2M2I5 525 aa16.7■□□□□ 0.26
NOP56-218ENST00000496775 SMC4Q9NTJ3 1288 aa16.7■□□□□ 0.26
NOP56-218ENST00000496775 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
NOP56-218ENST00000496775 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
NOP56-218ENST00000496775 MYL6BP14649 208 aa16.69■□□□□ 0.26
NOP56-218ENST00000496775 RARSP54136 660 aaKnown RBP16.69■□□□□ 0.26
NOP56-218ENST00000496775 KCNQ4P56696 695 aa16.69■□□□□ 0.26
NOP56-218ENST00000496775 PDIA6Q15084 440 aa16.69■□□□□ 0.26
NOP56-218ENST00000496775 ANKRD13DQ6ZTN6 518 aa16.69■□□□□ 0.26
NOP56-218ENST00000496775 DZIP3Q86Y13 1208 aaKnown RBP16.69■□□□□ 0.26
NOP56-218ENST00000496775 COL15A1P39059 1388 aa16.68■□□□□ 0.26
NOP56-218ENST00000496775 NBPF26B4DH59 902 aa16.68■□□□□ 0.26
NOP56-218ENST00000496775 NEXNQ0ZGT2 675 aa16.68■□□□□ 0.26
NOP56-218ENST00000496775 NBPF10Q6P3W6 841 aaKnown RBP16.68■□□□□ 0.26
NOP56-218ENST00000496775 COPS6Q7L5N1 327 aa16.68■□□□□ 0.26
NOP56-218ENST00000496775 NBPF15Q8N660 670 aa16.68■□□□□ 0.26
NOP56-218ENST00000496775 PLBD2Q8NHP8 589 aa16.68■□□□□ 0.26
NOP56-218ENST00000496775 ARHGEF1Q92888 912 aaKnown RBP16.68■□□□□ 0.26
NOP56-218ENST00000496775 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
NOP56-218ENST00000496775 RCAN3Q9UKA8 241 aa16.68■□□□□ 0.26
NOP56-218ENST00000496775 ZNF330Q9Y3S2 320 aaPredicted RBP16.68■□□□□ 0.26
NOP56-218ENST00000496775 C4BP0C0L5 1744 aa16.67■□□□□ 0.26
NOP56-218ENST00000496775 MSH5O43196 834 aa16.67■□□□□ 0.26
NOP56-218ENST00000496775 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
NOP56-218ENST00000496775 NECTIN2Q92692 538 aa16.67■□□□□ 0.26
NOP56-218ENST00000496775 ARXQ96QS3 562 aa16.67■□□□□ 0.26
NOP56-218ENST00000496775 MAP3K15Q6ZN16 1313 aa16.67■□□□□ 0.26
NOP56-218ENST00000496775 RREB1Q92766 1687 aa16.66■□□□□ 0.26
NOP56-218ENST00000496775 FLIIQ13045 1269 aa16.66■□□□□ 0.26
NOP56-218ENST00000496775 KSR2Q6VAB6 950 aa16.66■□□□□ 0.26
NOP56-218ENST00000496775 RIC3Q7Z5B4 369 aa16.66■□□□□ 0.26
NOP56-218ENST00000496775 SSH1Q8WYL5 1049 aa16.66■□□□□ 0.26
NOP56-218ENST00000496775 HDAC5Q9UQL6 1122 aa16.66■□□□□ 0.26
NOP56-218ENST00000496775 LAMB4A4D0S4 1761 aa16.65■□□□□ 0.26
NOP56-218ENST00000496775 PHF14O94880 888 aa16.65■□□□□ 0.26
NOP56-218ENST00000496775 FKBP5Q13451 457 aaPredicted RBP16.65■□□□□ 0.26
NOP56-218ENST00000496775 ZNF827Q17R98 1081 aa16.65■□□□□ 0.26
NOP56-218ENST00000496775 XAGE3Q8WTP9 111 aa16.65■□□□□ 0.26
NOP56-218ENST00000496775 CHMP4BQ9H444 224 aaKnown RBP16.65■□□□□ 0.26
NOP56-218ENST00000496775 USP42Q9H9J4 1324 aaKnown RBP16.65■□□□□ 0.26
NOP56-218ENST00000496775 TJP1Q07157 1748 aa16.65■□□□□ 0.26
NOP56-218ENST00000496775 GIGYF2Q6Y7W6 1299 aaKnown RBP16.64■□□□□ 0.25
NOP56-218ENST00000496775 LRP10Q7Z4F1 713 aa16.64■□□□□ 0.25
NOP56-218ENST00000496775 MRPL50Q8N5N7 158 aaKnown RBP16.64■□□□□ 0.25
NOP56-218ENST00000496775 COL5A3P25940 1745 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms