RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 UBR2Q8IWV8 1755 aa26.37■■□□□ 1.81
TSC22D4-206ENST00000496728 NGEFQ8N5V2 710 aa26.36■■□□□ 1.81
TSC22D4-206ENST00000496728 SALL2Q9Y467 1007 aaPredicted RBP26.36■■□□□ 1.81
TSC22D4-206ENST00000496728 WWC1Q8IX03 1113 aa26.35■■□□□ 1.81
TSC22D4-206ENST00000496728 USP16Q9Y5T5 823 aa26.35■■□□□ 1.81
TSC22D4-206ENST00000496728 CICQ96RK0 1608 aaPredicted RBP26.35■■□□□ 1.81
TSC22D4-206ENST00000496728 TJP1Q07157 1748 aa26.34■■□□□ 1.81
TSC22D4-206ENST00000496728 GIGYF1O75420 1035 aaPredicted RBP26.34■■□□□ 1.81
TSC22D4-206ENST00000496728 GNAI1P63096 354 aa26.34■■□□□ 1.81
TSC22D4-206ENST00000496728 PRAMEF22A3QJZ6 481 aa26.33■■□□□ 1.81
TSC22D4-206ENST00000496728 CANXP27824 592 aaKnown RBP26.33■■□□□ 1.81
TSC22D4-206ENST00000496728 RFC4P35249 363 aa26.33■■□□□ 1.81
TSC22D4-206ENST00000496728 ARHGEF1Q92888 912 aaKnown RBP26.33■■□□□ 1.81
TSC22D4-206ENST00000496728 IFT57Q9NWB7 429 aa26.33■■□□□ 1.81
TSC22D4-206ENST00000496728 ZBTB1Q9Y2K1 713 aa26.33■■□□□ 1.81
TSC22D4-206ENST00000496728 CASZ1Q86V15 1759 aa26.33■■□□□ 1.8
TSC22D4-206ENST00000496728 COL5A3P25940 1745 aaPredicted RBP26.32■■□□□ 1.8
TSC22D4-206ENST00000496728 QSER1Q2KHR3 1735 aa26.32■■□□□ 1.8
TSC22D4-206ENST00000496728 A1BGP04217 495 aa26.31■■□□□ 1.8
TSC22D4-206ENST00000496728 ZNF853P0CG23 659 aa26.31■■□□□ 1.8
TSC22D4-206ENST00000496728 SOS1Q07889 1333 aaPredicted RBP26.31■■□□□ 1.8
TSC22D4-206ENST00000496728 NPM2Q86SE8 214 aaKnown RBP26.3■■□□□ 1.8
TSC22D4-206ENST00000496728 MBIPQ9NS73 344 aa26.29■■□□□ 1.8
TSC22D4-206ENST00000496728 KDM3BQ7LBC6 1761 aa26.28■■□□□ 1.8
TSC22D4-206ENST00000496728 TUBGCP6Q96RT7 1819 aa26.28■■□□□ 1.8
TSC22D4-206ENST00000496728 UBR3Q6ZT12 1888 aa26.28■■□□□ 1.8
TSC22D4-206ENST00000496728 POLD1P28340 1107 aa26.28■■□□□ 1.8
TSC22D4-206ENST00000496728 IL6STP40189 918 aaPredicted RBP26.27■■□□□ 1.8
TSC22D4-206ENST00000496728 EIF5P55010 431 aaKnown RBP26.27■■□□□ 1.8
TSC22D4-206ENST00000496728 MSL1Q68DK7 614 aa26.27■■□□□ 1.8
TSC22D4-206ENST00000496728 WDR63Q8IWG1 891 aa26.27■■□□□ 1.8
TSC22D4-206ENST00000496728 PPP1R1BQ9UD71 204 aaPredicted RBP26.27■■□□□ 1.8
TSC22D4-206ENST00000496728 ZNF330Q9Y3S2 320 aaPredicted RBP26.27■■□□□ 1.8
TSC22D4-206ENST00000496728 MYH14Q7Z406 1995 aaKnown RBP26.27■■□□□ 1.8
TSC22D4-206ENST00000496728 IL16Q14005 1332 aa26.26■■□□□ 1.79
TSC22D4-206ENST00000496728 A0A087WZG4 1122 aa26.26■■□□□ 1.79
TSC22D4-206ENST00000496728 PTGER2P43116 358 aa26.26■■□□□ 1.79
TSC22D4-206ENST00000496728 COL15A1P39059 1388 aa26.25■■□□□ 1.79
TSC22D4-206ENST00000496728 ZPR1O75312 459 aa26.25■■□□□ 1.79
TSC22D4-206ENST00000496728 SGIP1Q9BQI5 828 aa26.24■■□□□ 1.79
TSC22D4-206ENST00000496728 EIF2S2P20042 333 aaKnown RBP26.23■■□□□ 1.79
TSC22D4-206ENST00000496728 NLGN1Q8N2Q7 840 aa26.23■■□□□ 1.79
TSC22D4-206ENST00000496728 LRP5O75197 1615 aa26.22■■□□□ 1.79
TSC22D4-206ENST00000496728 USP42Q9H9J4 1324 aaKnown RBP26.22■■□□□ 1.79
TSC22D4-206ENST00000496728 PIP4K2AP48426 406 aaPredicted RBP26.22■■□□□ 1.79
TSC22D4-206ENST00000496728 KRT24Q2M2I5 525 aa26.22■■□□□ 1.79
TSC22D4-206ENST00000496728 ARXQ96QS3 562 aa26.22■■□□□ 1.79
TSC22D4-206ENST00000496728 SRP68Q9UHB9 627 aaKnown RBP26.22■■□□□ 1.79
TSC22D4-206ENST00000496728 NARFQ9UHQ1 456 aa26.22■■□□□ 1.79
TSC22D4-206ENST00000496728 HOXB7P09629 217 aa26.21■■□□□ 1.79
TSC22D4-206ENST00000496728 GYS1P13807 737 aa26.21■■□□□ 1.79
TSC22D4-206ENST00000496728 NBPF26B4DH59 902 aa26.2■■□□□ 1.78
TSC22D4-206ENST00000496728 DUSP27Q5VZP5 1158 aa26.2■■□□□ 1.78
TSC22D4-206ENST00000496728 NBPF10Q6P3W6 841 aaKnown RBP26.2■■□□□ 1.78
TSC22D4-206ENST00000496728 NBPF15Q8N660 670 aa26.2■■□□□ 1.78
TSC22D4-206ENST00000496728 ERBB4Q15303 1308 aa26.19■■□□□ 1.78
TSC22D4-206ENST00000496728 USPL1Q5W0Q7 1092 aa26.19■■□□□ 1.78
TSC22D4-206ENST00000496728 TSR2Q969E8 191 aaKnown RBP26.19■■□□□ 1.78
TSC22D4-206ENST00000496728 TBC1D2BQ9UPU7 963 aa26.18■■□□□ 1.78
TSC22D4-206ENST00000496728 DZIP3Q86Y13 1208 aaKnown RBP26.17■■□□□ 1.78
TSC22D4-206ENST00000496728 NECTIN2Q92692 538 aa26.17■■□□□ 1.78
TSC22D4-206ENST00000496728 ELL2O00472 640 aaPredicted RBP26.16■■□□□ 1.78
TSC22D4-206ENST00000496728 MYL6BP14649 208 aa26.16■■□□□ 1.78
TSC22D4-206ENST00000496728 HDGFL1Q5TGJ6 251 aa26.16■■□□□ 1.78
TSC22D4-206ENST00000496728 SRCAPQ6ZRS2 3230 aa26.15■■□□□ 1.78
TSC22D4-206ENST00000496728 MMP10P09238 476 aa26.15■■□□□ 1.78
TSC22D4-206ENST00000496728 FKBP8Q14318 412 aa26.15■■□□□ 1.78
TSC22D4-206ENST00000496728 C8orf58Q8NAV2 365 aa26.15■■□□□ 1.78
TSC22D4-206ENST00000496728 CHMP4AQ9BY43 222 aa26.15■■□□□ 1.78
TSC22D4-206ENST00000496728 MYH16Q9H6N6 1097 aa26.15■■□□□ 1.78
TSC22D4-206ENST00000496728 ZNF521Q96K83 1311 aa26.14■■□□□ 1.78
TSC22D4-206ENST00000496728 GOLGA2Q08379 1002 aa26.14■■□□□ 1.78
TSC22D4-206ENST00000496728 FANCIQ9NVI1 1328 aa26.13■■□□□ 1.77
TSC22D4-206ENST00000496728 PARP3Q9Y6F1 533 aa26.12■■□□□ 1.77
TSC22D4-206ENST00000496728 LAMB4A4D0S4 1761 aa26.12■■□□□ 1.77
TSC22D4-206ENST00000496728 CAMTA2O94983 1202 aa26.11■■□□□ 1.77
TSC22D4-206ENST00000496728 PDIA6Q15084 440 aa26.11■■□□□ 1.77
TSC22D4-206ENST00000496728 BCL2L12Q9HB09 334 aa26.11■■□□□ 1.77
TSC22D4-206ENST00000496728 SPINK5Q9NQ38 1064 aaPredicted RBP26.11■■□□□ 1.77
TSC22D4-206ENST00000496728 DDX21Q9NR30 783 aaKnown RBP eCLIP26.11■■□□□ 1.77
TSC22D4-206ENST00000496728 KLHL34Q8N239 644 aa26.1■■□□□ 1.77
TSC22D4-206ENST00000496728 TSPYL6Q8N831 410 aa26.1■■□□□ 1.77
TSC22D4-206ENST00000496728 FHDC1Q9C0D6 1143 aaPredicted RBP26.1■■□□□ 1.77
TSC22D4-206ENST00000496728 DBF4Q9UBU7 674 aaPredicted RBP26.1■■□□□ 1.77
TSC22D4-206ENST00000496728 C4AP0C0L4 1744 aa26.1■■□□□ 1.77
TSC22D4-206ENST00000496728 TM4SF1P30408 202 aa26.09■■□□□ 1.77
TSC22D4-206ENST00000496728 KIF6Q6ZMV9 814 aa26.09■■□□□ 1.77
TSC22D4-206ENST00000496728 CHPF2Q9P2E5 772 aa26.09■■□□□ 1.77
TSC22D4-206ENST00000496728 ZNF652Q9Y2D9 606 aa26.09■■□□□ 1.77
TSC22D4-206ENST00000496728 ANXA1P04083 346 aa26.08■■□□□ 1.77
TSC22D4-206ENST00000496728 PROSER3Q2NL68 480 aa26.08■■□□□ 1.77
TSC22D4-206ENST00000496728 TWISTNBQ3B726 338 aaPredicted RBP26.08■■□□□ 1.77
TSC22D4-206ENST00000496728 CCDC30Q5VVM6 783 aa26.08■■□□□ 1.77
TSC22D4-206ENST00000496728 CLEC4GQ6UXB4 293 aa26.08■■□□□ 1.77
TSC22D4-206ENST00000496728 COL24A1Q17RW2 1714 aa26.08■■□□□ 1.76
TSC22D4-206ENST00000496728 E9PSI1 815 aa26.07■■□□□ 1.76
TSC22D4-206ENST00000496728 RGL2O15211 777 aa26.07■■□□□ 1.76
TSC22D4-206ENST00000496728 NFIXQ14938 502 aa26.07■■□□□ 1.76
TSC22D4-206ENST00000496728 EXOSC9Q06265 439 aaKnown RBP26.06■■□□□ 1.76
TSC22D4-206ENST00000496728 BICDL1Q6ZP65 573 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms