RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 SF3B2Q13435 895 aaKnown RBP9.47□□□□□ -0.89
NPHP1-211ENST00000496524 PSMC4P43686 418 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 SCLT1Q96NL6 688 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 CCDC7Q96M83 1385 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 CCDC196A0A1B0GTZ2 297 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 CNGA1P29973 690 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 JADE2Q9NQC1 790 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 JAKMIP2Q96AA8 810 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 PHLDB2Q86SQ0 1253 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 CCDC144AA2RUR9 1427 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 AMPD3Q01432 767 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 CEP128Q6ZU80 1094 aa9.47□□□□□ -0.89
NPHP1-211ENST00000496524 CCDC14Q49A88 953 aa9.46□□□□□ -0.89
NPHP1-211ENST00000496524 DDX19AQ9NUU7 478 aaKnown RBP9.46□□□□□ -0.89
NPHP1-211ENST00000496524 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.46□□□□□ -0.89
NPHP1-211ENST00000496524 SAMD15Q9P1V8 674 aa9.46□□□□□ -0.89
NPHP1-211ENST00000496524 FERMT2Q96AC1 680 aa9.46□□□□□ -0.89
NPHP1-211ENST00000496524 TDRD12Q587J7 1177 aaKnown RBP9.46□□□□□ -0.89
NPHP1-211ENST00000496524 CTCFLQ8NI51 663 aaPredicted RBP9.46□□□□□ -0.89
NPHP1-211ENST00000496524 PDRG1Q9NUG6 133 aa9.46□□□□□ -0.89
NPHP1-211ENST00000496524 TSNAXIP1Q2TAA8 658 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 MRVI1Q9Y6F6 885 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 MAP7Q14244 749 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 CPLX4Q7Z7G2 160 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 WDR63Q8IWG1 891 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 SMAP1Q8IYB5 467 aaPredicted RBP9.46□□□□□ -0.9
NPHP1-211ENST00000496524 SMC1BQ8NDV3 1235 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 CIB2O75838 187 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 ATP5DP30049 168 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 KLHL10Q6JEL2 608 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 CTAGE6Q86UF2 777 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 STAC3Q96MF2 364 aa9.46□□□□□ -0.9
NPHP1-211ENST00000496524 PRC1O43663 620 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 TTC39AQ5SRH9 613 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 SERPINA10Q9UK55 444 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 CTAGE1Q96RT6 745 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 KIF5AQ12840 1032 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 ARID4AP29374 1257 aaPredicted RBP9.45□□□□□ -0.9
NPHP1-211ENST00000496524 STX1AQ16623 288 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 STXBP4Q6ZWJ1 553 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.45□□□□□ -0.9
NPHP1-211ENST00000496524 PCK1P35558 622 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 ZNF76P36508 570 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 CCT4P50991 539 aaKnown RBP9.45□□□□□ -0.9
NPHP1-211ENST00000496524 RAB3IPQ96QF0 476 aaPredicted RBP9.45□□□□□ -0.9
NPHP1-211ENST00000496524 CCDC94Q9BW85 323 aaPredicted RBP9.45□□□□□ -0.9
NPHP1-211ENST00000496524 USP25Q9UHP3 1055 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 MIA2Q96PC5 1412 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 CTAGE15A4D2H0 777 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 CTAGE8P0CG41 777 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 CTAGE4Q8IX94 777 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 ST20-MTHFSA0A0A6YYL1 179 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 SSBP05455 408 aaKnown RBP eCLIP9.45□□□□□ -0.9
NPHP1-211ENST00000496524 CLCN1P35523 988 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 IRX4P78413 519 aa9.45□□□□□ -0.9
NPHP1-211ENST00000496524 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.45□□□□□ -0.9
NPHP1-211ENST00000496524 TTC36A6NLP5 189 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 ODF2LQ9ULJ1 636 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 TTC21AQ8NDW8 1320 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 BRD4O60885 1362 aaPredicted RBP9.44□□□□□ -0.9
NPHP1-211ENST00000496524 NDC80O14777 642 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 WHAMMP3Q1A5X7 153 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 ARHGAP24Q8N264 748 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 UBAC1Q9BSL1 405 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 TSPYL2Q9H2G4 693 aaPredicted RBP9.44□□□□□ -0.9
NPHP1-211ENST00000496524 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
NPHP1-211ENST00000496524 LRRC27Q9C0I9 530 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 CYLC1P35663 651 aaPredicted RBP9.44□□□□□ -0.9
NPHP1-211ENST00000496524 ZNF365Q70YC5 407 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 APBB1IPQ7Z5R6 666 aaPredicted RBP9.44□□□□□ -0.9
NPHP1-211ENST00000496524 AKAP2Q9Y2D5 859 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 USP47Q96K76 1375 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 NUF2Q9BZD4 464 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 MACROD2A1Z1Q3 448 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 ATP2A2P16615 1042 aaKnown RBP9.44□□□□□ -0.9
NPHP1-211ENST00000496524 PRR16Q569H4 304 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 WHAMMQ8TF30 809 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 PDZRN3Q9UPQ7 1066 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
NPHP1-211ENST00000496524 XPCQ01831 940 aaPredicted RBP9.43□□□□□ -0.9
NPHP1-211ENST00000496524 TMEM266Q2M3C6 531 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 GOLGA1Q92805 767 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 ARHGAP25P42331 645 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 NOP2P46087 812 aaKnown RBP9.43□□□□□ -0.9
NPHP1-211ENST00000496524 OGFRQ9NZT2 677 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 CTAGE9A4FU28 777 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 CCDC38Q502W7 563 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 CCDC12Q8WUD4 166 aaPredicted RBP9.43□□□□□ -0.9
NPHP1-211ENST00000496524 KIF6Q6ZMV9 814 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 MTUS1Q9ULD2 1270 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 NEDD9Q14511 834 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 BCAP29Q9UHQ4 241 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 CARMIL2Q6F5E8 1435 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 STK3Q13188 491 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 MSH5O43196 834 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 GNG11P61952 73 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 TRPC3Q13507 836 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 PRPF4BQ13523 1007 aaKnown RBP9.43□□□□□ -0.9
NPHP1-211ENST00000496524 MIER3Q7Z3K6 550 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms