RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 PRAMEF22A3QJZ6 481 aa16.32■□□□□ 0.2
TRIM59-207ENST00000496222 EIF5P55010 431 aaKnown RBP16.32■□□□□ 0.2
TRIM59-207ENST00000496222 FKBP8Q14318 412 aa16.32■□□□□ 0.2
TRIM59-207ENST00000496222 KLHL34Q8N239 644 aa16.32■□□□□ 0.2
TRIM59-207ENST00000496222 TEX13AQ9BXU3 409 aaPredicted RBP16.32■□□□□ 0.2
TRIM59-207ENST00000496222 KIF13BQ9NQT8 1826 aa16.32■□□□□ 0.2
TRIM59-207ENST00000496222 ADAMTS8Q9UP79 889 aa16.32■□□□□ 0.2
TRIM59-207ENST00000496222 KDM3BQ7LBC6 1761 aa16.31■□□□□ 0.2
TRIM59-207ENST00000496222 COL15A1P39059 1388 aa16.31■□□□□ 0.2
TRIM59-207ENST00000496222 MAPK8IP3Q9UPT6 1336 aa16.31■□□□□ 0.2
TRIM59-207ENST00000496222 STARD3NLO95772 234 aa16.31■□□□□ 0.2
TRIM59-207ENST00000496222 NEFMP07197 916 aa16.31■□□□□ 0.2
TRIM59-207ENST00000496222 TMPOP42166 694 aaKnown RBP16.31■□□□□ 0.2
TRIM59-207ENST00000496222 BCL2L12Q9HB09 334 aa16.31■□□□□ 0.2
TRIM59-207ENST00000496222 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
TRIM59-207ENST00000496222 USP16Q9Y5T5 823 aa16.31■□□□□ 0.2
TRIM59-207ENST00000496222 KIAA1551Q9HCM1 1747 aa16.31■□□□□ 0.2
TRIM59-207ENST00000496222 TM4SF1P30408 202 aa16.3■□□□□ 0.2
TRIM59-207ENST00000496222 NARFQ9UHQ1 456 aa16.3■□□□□ 0.2
TRIM59-207ENST00000496222 A1BGP04217 495 aa16.29■□□□□ 0.2
TRIM59-207ENST00000496222 CANXP27824 592 aaKnown RBP16.29■□□□□ 0.2
TRIM59-207ENST00000496222 RIPK4P57078 832 aa16.29■□□□□ 0.2
TRIM59-207ENST00000496222 DDR1Q08345 913 aa16.29■□□□□ 0.2
TRIM59-207ENST00000496222 CCDC184Q52MB2 194 aa16.29■□□□□ 0.2
TRIM59-207ENST00000496222 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
TRIM59-207ENST00000496222 CCDC146Q8IYE0 955 aa16.29■□□□□ 0.2
TRIM59-207ENST00000496222 SNRPA1P09661 255 aaKnown RBP16.28■□□□□ 0.2
TRIM59-207ENST00000496222 YBX3P16989 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
TRIM59-207ENST00000496222 RUNDC1Q96C34 613 aa16.28■□□□□ 0.2
TRIM59-207ENST00000496222 C10orf71Q711Q0 1435 aa16.28■□□□□ 0.2
TRIM59-207ENST00000496222 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
TRIM59-207ENST00000496222 IL6STP40189 918 aaPredicted RBP16.27■□□□□ 0.2
TRIM59-207ENST00000496222 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
TRIM59-207ENST00000496222 POLRMTO00411 1230 aaKnown RBP16.26■□□□□ 0.19
TRIM59-207ENST00000496222 ZPR1O75312 459 aa16.26■□□□□ 0.19
TRIM59-207ENST00000496222 EIF4A1P60842 406 aaKnown RBP16.26■□□□□ 0.19
TRIM59-207ENST00000496222 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRIM59-207ENST00000496222 PNISRQ8TF01 805 aaKnown RBP16.26■□□□□ 0.19
TRIM59-207ENST00000496222 RRP7AQ9Y3A4 280 aaKnown RBP16.26■□□□□ 0.19
TRIM59-207ENST00000496222 PXDNLA1KZ92 1463 aa16.25■□□□□ 0.19
TRIM59-207ENST00000496222 NBPF26B4DH59 902 aa16.25■□□□□ 0.19
TRIM59-207ENST00000496222 GIGYF1O75420 1035 aaPredicted RBP16.25■□□□□ 0.19
TRIM59-207ENST00000496222 NFIXQ14938 502 aa16.25■□□□□ 0.19
TRIM59-207ENST00000496222 GPR162Q16538 588 aa16.25■□□□□ 0.19
TRIM59-207ENST00000496222 NBPF10Q6P3W6 841 aaKnown RBP16.25■□□□□ 0.19
TRIM59-207ENST00000496222 NBPF15Q8N660 670 aa16.25■□□□□ 0.19
TRIM59-207ENST00000496222 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
TRIM59-207ENST00000496222 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
TRIM59-207ENST00000496222 LAMB4A4D0S4 1761 aa16.24■□□□□ 0.19
TRIM59-207ENST00000496222 CHD4Q14839 1912 aa16.24■□□□□ 0.19
TRIM59-207ENST00000496222 PIP4K2AP48426 406 aaPredicted RBP16.24■□□□□ 0.19
TRIM59-207ENST00000496222 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
TRIM59-207ENST00000496222 AFDNP55196 1824 aaKnown RBP16.24■□□□□ 0.19
TRIM59-207ENST00000496222 N4BP2Q86UW6 1770 aaPredicted RBP16.23■□□□□ 0.19
TRIM59-207ENST00000496222 A0A087WZG4 1122 aa16.23■□□□□ 0.19
TRIM59-207ENST00000496222 KCNA3P22001 575 aa16.23■□□□□ 0.19
TRIM59-207ENST00000496222 TBC1D2BQ9UPU7 963 aa16.23■□□□□ 0.19
TRIM59-207ENST00000496222 CAMTA2O94983 1202 aa16.22■□□□□ 0.19
TRIM59-207ENST00000496222 YY1P25490 414 aa16.22■□□□□ 0.19
TRIM59-207ENST00000496222 TGFB2P61812 414 aa16.22■□□□□ 0.19
TRIM59-207ENST00000496222 LMOD3Q0VAK6 560 aa16.22■□□□□ 0.19
TRIM59-207ENST00000496222 NEUROD2Q15784 382 aa16.22■□□□□ 0.19
TRIM59-207ENST00000496222 BABAM1Q9NWV8 329 aa16.22■□□□□ 0.19
TRIM59-207ENST00000496222 BRCA1P38398 1863 aaKnown RBP16.22■□□□□ 0.19
TRIM59-207ENST00000496222 BCORQ6W2J9 1755 aa16.21■□□□□ 0.19
TRIM59-207ENST00000496222 A0A0G2JLW4 131 aa16.2■□□□□ 0.18
TRIM59-207ENST00000496222 CHL1O00533 1208 aa16.2■□□□□ 0.18
TRIM59-207ENST00000496222 TBC1D9BQ66K14 1250 aa16.2■□□□□ 0.18
TRIM59-207ENST00000496222 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
TRIM59-207ENST00000496222 TSPYL4Q9UJ04 414 aa16.2■□□□□ 0.18
TRIM59-207ENST00000496222 APAF1O14727 1248 aa16.19■□□□□ 0.18
TRIM59-207ENST00000496222 DPEP1P16444 411 aa16.19■□□□□ 0.18
TRIM59-207ENST00000496222 ZNF330Q9Y3S2 320 aaPredicted RBP16.19■□□□□ 0.18
TRIM59-207ENST00000496222 GRIN3BO60391 1043 aa16.18■□□□□ 0.18
TRIM59-207ENST00000496222 SERPINB2P05120 415 aa16.18■□□□□ 0.18
TRIM59-207ENST00000496222 DZIP3Q86Y13 1208 aaKnown RBP16.18■□□□□ 0.18
TRIM59-207ENST00000496222 LRP10Q7Z4F1 713 aa16.17■□□□□ 0.18
TRIM59-207ENST00000496222 WWC3Q9ULE0 1092 aa16.17■□□□□ 0.18
TRIM59-207ENST00000496222 ANP32CO43423 234 aa16.16■□□□□ 0.18
TRIM59-207ENST00000496222 ZNF853P0CG23 659 aa16.16■□□□□ 0.18
TRIM59-207ENST00000496222 BICDL1Q6ZP65 573 aa16.16■□□□□ 0.18
TRIM59-207ENST00000496222 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
TRIM59-207ENST00000496222 RGL2O15211 777 aa16.15■□□□□ 0.18
TRIM59-207ENST00000496222 PDIA6Q15084 440 aa16.15■□□□□ 0.18
TRIM59-207ENST00000496222 CLEC4GQ6UXB4 293 aa16.15■□□□□ 0.18
TRIM59-207ENST00000496222 ANKRD31Q8N7Z5 1873 aa16.15■□□□□ 0.18
TRIM59-207ENST00000496222 CHRNA5P30532 468 aa16.14■□□□□ 0.17
TRIM59-207ENST00000496222 HLFQ16534 295 aa16.14■□□□□ 0.17
TRIM59-207ENST00000496222 KRT24Q2M2I5 525 aa16.14■□□□□ 0.17
TRIM59-207ENST00000496222 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
TRIM59-207ENST00000496222 PRR5LQ6MZQ0 368 aa16.13■□□□□ 0.17
TRIM59-207ENST00000496222 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
TRIM59-207ENST00000496222 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
TRIM59-207ENST00000496222 DLEC1Q9Y238 1755 aa16.13■□□□□ 0.17
TRIM59-207ENST00000496222 ARFGEF1Q9Y6D6 1849 aa16.12■□□□□ 0.17
TRIM59-207ENST00000496222 PROSER3Q2NL68 480 aa16.12■□□□□ 0.17
TRIM59-207ENST00000496222 NPM2Q86SE8 214 aaKnown RBP16.12■□□□□ 0.17
TRIM59-207ENST00000496222 ZNF784Q8NCA9 323 aaPredicted RBP16.12■□□□□ 0.17
TRIM59-207ENST00000496222 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
TRIM59-207ENST00000496222 MRS2Q9HD23 443 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms