RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 LAMB4A4D0S4 1761 aa27.97■■■□□ 2.07
ECHDC3-205ENST00000496136 SLC4A2P04920 1241 aa27.96■■■□□ 2.07
ECHDC3-205ENST00000496136 STK31Q9BXU1 1019 aa27.96■■■□□ 2.07
ECHDC3-205ENST00000496136 CHPF2Q9P2E5 772 aa27.96■■■□□ 2.07
ECHDC3-205ENST00000496136 MRPL50Q8N5N7 158 aaKnown RBP27.96■■■□□ 2.07
ECHDC3-205ENST00000496136 DBF4Q9UBU7 674 aaPredicted RBP27.96■■■□□ 2.07
ECHDC3-205ENST00000496136 A1BGP04217 495 aa27.95■■■□□ 2.06
ECHDC3-205ENST00000496136 PDIA6Q15084 440 aa27.95■■■□□ 2.06
ECHDC3-205ENST00000496136 LRRC4BQ9NT99 713 aa27.95■■■□□ 2.06
ECHDC3-205ENST00000496136 CACNA1FO60840 1977 aa27.94■■■□□ 2.06
ECHDC3-205ENST00000496136 CICQ96RK0 1608 aaPredicted RBP27.94■■■□□ 2.06
ECHDC3-205ENST00000496136 SLC27A3Q5K4L6 730 aa27.94■■■□□ 2.06
ECHDC3-205ENST00000496136 BRPF1P55201 1214 aaPredicted RBP27.94■■■□□ 2.06
ECHDC3-205ENST00000496136 TXNRD1Q16881 649 aa27.94■■■□□ 2.06
ECHDC3-205ENST00000496136 SF3B2Q13435 895 aaKnown RBP27.93■■■□□ 2.06
ECHDC3-205ENST00000496136 CCDC125Q86Z20 511 aa27.93■■■□□ 2.06
ECHDC3-205ENST00000496136 DDX21Q9NR30 783 aaKnown RBP eCLIP27.93■■■□□ 2.06
ECHDC3-205ENST00000496136 SUPT16HQ9Y5B9 1047 aaKnown RBP27.93■■■□□ 2.06
ECHDC3-205ENST00000496136 NBPF26B4DH59 902 aa27.92■■■□□ 2.06
ECHDC3-205ENST00000496136 ANXA1P04083 346 aa27.92■■■□□ 2.06
ECHDC3-205ENST00000496136 PIP4K2AP48426 406 aaPredicted RBP27.92■■■□□ 2.06
ECHDC3-205ENST00000496136 PROSER3Q2NL68 480 aa27.92■■■□□ 2.06
ECHDC3-205ENST00000496136 NBPF14Q5TI25 921 aa27.92■■■□□ 2.06
ECHDC3-205ENST00000496136 NBPF10Q6P3W6 841 aaKnown RBP27.92■■■□□ 2.06
ECHDC3-205ENST00000496136 NBPF15Q8N660 670 aa27.92■■■□□ 2.06
ECHDC3-205ENST00000496136 LINC00116Q8NCU8 138 aa27.92■■■□□ 2.06
ECHDC3-205ENST00000496136 ERBB4Q15303 1308 aa27.91■■■□□ 2.06
ECHDC3-205ENST00000496136 CRKLP46109 303 aaKnown RBP27.91■■■□□ 2.06
ECHDC3-205ENST00000496136 MYL6BP14649 208 aa27.9■■■□□ 2.06
ECHDC3-205ENST00000496136 EN1Q05925 392 aaPredicted RBP27.9■■■□□ 2.06
ECHDC3-205ENST00000496136 INTS5Q6P9B9 1019 aaKnown RBP27.9■■■□□ 2.06
ECHDC3-205ENST00000496136 MYH14Q7Z406 1995 aaKnown RBP27.9■■■□□ 2.06
ECHDC3-205ENST00000496136 TAF1LQ8IZX4 1826 aa27.9■■■□□ 2.06
ECHDC3-205ENST00000496136 COL5A3P25940 1745 aaPredicted RBP27.89■■■□□ 2.06
ECHDC3-205ENST00000496136 G2E3Q7L622 706 aa27.89■■■□□ 2.06
ECHDC3-205ENST00000496136 CAMKK2Q96RR4 588 aa27.89■■■□□ 2.06
ECHDC3-205ENST00000496136 HYPKQ9NX55 129 aa27.89■■■□□ 2.06
ECHDC3-205ENST00000496136 LRP10Q7Z4F1 713 aa27.88■■■□□ 2.05
ECHDC3-205ENST00000496136 PHAXQ9H814 394 aaKnown RBP27.88■■■□□ 2.05
ECHDC3-205ENST00000496136 CCDC87Q9NVE4 849 aa27.88■■■□□ 2.05
ECHDC3-205ENST00000496136 NOB1Q9ULX3 412 aaKnown RBP27.88■■■□□ 2.05
ECHDC3-205ENST00000496136 ZBTB1Q9Y2K1 713 aa27.88■■■□□ 2.05
ECHDC3-205ENST00000496136 CANXP27824 592 aaKnown RBP27.87■■■□□ 2.05
ECHDC3-205ENST00000496136 BAG6P46379 1132 aa27.87■■■□□ 2.05
ECHDC3-205ENST00000496136 FRAT1Q92837 279 aaPredicted RBP27.87■■■□□ 2.05
ECHDC3-205ENST00000496136 RGPD3A6NKT7 1758 aaPredicted RBP27.87■■■□□ 2.05
ECHDC3-205ENST00000496136 RGPD4Q7Z3J3 1758 aa27.87■■■□□ 2.05
ECHDC3-205ENST00000496136 EZH2Q15910 746 aaKnown RBP27.86■■■□□ 2.05
ECHDC3-205ENST00000496136 DEFB132Q7Z7B7 95 aa27.86■■■□□ 2.05
ECHDC3-205ENST00000496136 RC3H1Q5TC82 1133 aaKnown RBP27.86■■■□□ 2.05
ECHDC3-205ENST00000496136 PLIN1O60240 522 aa27.85■■■□□ 2.05
ECHDC3-205ENST00000496136 RNF123Q5XPI4 1314 aa27.85■■■□□ 2.05
ECHDC3-205ENST00000496136 KIF16BQ96L93 1317 aa27.85■■■□□ 2.05
ECHDC3-205ENST00000496136 CNTNAP4Q9C0A0 1308 aa27.85■■■□□ 2.05
ECHDC3-205ENST00000496136 FLIIQ13045 1269 aa27.84■■■□□ 2.05
ECHDC3-205ENST00000496136 UPF1Q92900 1129 aaKnown RBP eCLIP27.84■■■□□ 2.05
ECHDC3-205ENST00000496136 HMGB2P26583 209 aaKnown RBP27.83■■■□□ 2.05
ECHDC3-205ENST00000496136 IPO8O15397 1037 aaKnown RBP27.82■■■□□ 2.04
ECHDC3-205ENST00000496136 IL6STP40189 918 aaPredicted RBP27.82■■■□□ 2.04
ECHDC3-205ENST00000496136 RRP1P56182 461 aaKnown RBP27.82■■■□□ 2.04
ECHDC3-205ENST00000496136 COPS6Q7L5N1 327 aa27.82■■■□□ 2.04
ECHDC3-205ENST00000496136 ARHGAP45Q92619 1136 aa27.82■■■□□ 2.04
ECHDC3-205ENST00000496136 ZKSCAN2Q63HK3 967 aa27.81■■■□□ 2.04
ECHDC3-205ENST00000496136 C4BP0C0L5 1744 aa27.81■■■□□ 2.04
ECHDC3-205ENST00000496136 RREB1Q92766 1687 aa27.81■■■□□ 2.04
ECHDC3-205ENST00000496136 EIF5P55010 431 aaKnown RBP27.81■■■□□ 2.04
ECHDC3-205ENST00000496136 AIMP1Q12904 312 aaKnown RBP27.81■■■□□ 2.04
ECHDC3-205ENST00000496136 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.81■■■□□ 2.04
ECHDC3-205ENST00000496136 XAGE3Q8WTP9 111 aa27.81■■■□□ 2.04
ECHDC3-205ENST00000496136 ZNF330Q9Y3S2 320 aaPredicted RBP27.81■■■□□ 2.04
ECHDC3-205ENST00000496136 PTPRCP08575 1304 aa27.8■■■□□ 2.04
ECHDC3-205ENST00000496136 FKBP5Q13451 457 aaPredicted RBP27.79■■■□□ 2.04
ECHDC3-205ENST00000496136 RPS6KA4O75676 772 aa27.78■■■□□ 2.04
ECHDC3-205ENST00000496136 ATF7IPQ6VMQ6 1270 aa27.78■■■□□ 2.04
ECHDC3-205ENST00000496136 GNPATO15228 680 aa27.78■■■□□ 2.04
ECHDC3-205ENST00000496136 TRIM27P14373 513 aa27.78■■■□□ 2.04
ECHDC3-205ENST00000496136 AK7Q96M32 723 aa27.77■■■□□ 2.04
ECHDC3-205ENST00000496136 TNNQ9UQP3 1299 aa27.77■■■□□ 2.04
ECHDC3-205ENST00000496136 TTLL7Q6ZT98 887 aa27.76■■■□□ 2.03
ECHDC3-205ENST00000496136 NPM2Q86SE8 214 aaKnown RBP27.76■■■□□ 2.03
ECHDC3-205ENST00000496136 API5Q9BZZ5 524 aaKnown RBP27.76■■■□□ 2.03
ECHDC3-205ENST00000496136 RTCBQ9Y3I0 505 aaKnown RBP27.76■■■□□ 2.03
ECHDC3-205ENST00000496136 PI4KAP2A4QPH2 592 aa27.75■■■□□ 2.03
ECHDC3-205ENST00000496136 ANKRD13DQ6ZTN6 518 aa27.75■■■□□ 2.03
ECHDC3-205ENST00000496136 SMIM5Q71RC9 77 aa27.75■■■□□ 2.03
ECHDC3-205ENST00000496136 PI4KAP1Q8N8J0 262 aa27.75■■■□□ 2.03
ECHDC3-205ENST00000496136 KSR2Q6VAB6 950 aa27.74■■■□□ 2.03
ECHDC3-205ENST00000496136 AMIGO3Q86WK7 504 aa27.74■■■□□ 2.03
ECHDC3-205ENST00000496136 CLUAP1Q96AJ1 413 aa27.74■■■□□ 2.03
ECHDC3-205ENST00000496136 AKT1S1Q96B36 256 aa27.74■■■□□ 2.03
ECHDC3-205ENST00000496136 F6X3S4 739 aa27.73■■■□□ 2.03
ECHDC3-205ENST00000496136 DDX58O95786 925 aaKnown RBP27.73■■■□□ 2.03
ECHDC3-205ENST00000496136 ARXQ96QS3 562 aa27.73■■■□□ 2.03
ECHDC3-205ENST00000496136 C20orf194Q5TEA3 1177 aa27.73■■■□□ 2.03
ECHDC3-205ENST00000496136 TBC1D2BQ9UPU7 963 aa27.72■■■□□ 2.03
ECHDC3-205ENST00000496136 ADCY9O60503 1353 aa27.72■■■□□ 2.03
ECHDC3-205ENST00000496136 COL15A1P39059 1388 aa27.72■■■□□ 2.03
ECHDC3-205ENST00000496136 PDE3AQ14432 1141 aa27.71■■■□□ 2.03
ECHDC3-205ENST00000496136 ZNF827Q17R98 1081 aa27.71■■■□□ 2.03
ECHDC3-205ENST00000496136 DZIP3Q86Y13 1208 aaKnown RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms