RNA–Protein interactions for RNA: ENST00000496027.5

CCDC13-209, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 386 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-209ENST00000496027 PARP3Q9Y6F1 533 aa17.57■□□□□ 0.4
CCDC13-209ENST00000496027 MMP10P09238 476 aa17.56■□□□□ 0.4
CCDC13-209ENST00000496027 GPR162Q16538 588 aa17.56■□□□□ 0.4
CCDC13-209ENST00000496027 SOS1Q07889 1333 aaPredicted RBP17.55■□□□□ 0.4
CCDC13-209ENST00000496027 USP42Q9H9J4 1324 aaKnown RBP17.55■□□□□ 0.4
CCDC13-209ENST00000496027 GRIN3BO60391 1043 aa17.55■□□□□ 0.4
CCDC13-209ENST00000496027 RIPK4P57078 832 aa17.55■□□□□ 0.4
CCDC13-209ENST00000496027 RUNDC1Q96C34 613 aa17.55■□□□□ 0.4
CCDC13-209ENST00000496027 BABAM1Q9NWV8 329 aa17.55■□□□□ 0.4
CCDC13-209ENST00000496027 NARFQ9UHQ1 456 aa17.55■□□□□ 0.4
CCDC13-209ENST00000496027 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
CCDC13-209ENST00000496027 TGFB2P61812 414 aa17.54■□□□□ 0.4
CCDC13-209ENST00000496027 DCTN1Q14203 1278 aa17.54■□□□□ 0.4
CCDC13-209ENST00000496027 CANXP27824 592 aaKnown RBP17.53■□□□□ 0.4
CCDC13-209ENST00000496027 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
CCDC13-209ENST00000496027 EIF5P55010 431 aaKnown RBP17.53■□□□□ 0.4
CCDC13-209ENST00000496027 TM4SF1P30408 202 aa17.52■□□□□ 0.4
CCDC13-209ENST00000496027 ADAMTS8Q9UP79 889 aa17.52■□□□□ 0.4
CCDC13-209ENST00000496027 ZBTB1Q9Y2K1 713 aa17.52■□□□□ 0.4
CCDC13-209ENST00000496027 CHD4Q14839 1912 aa17.52■□□□□ 0.4
CCDC13-209ENST00000496027 C4AP0C0L4 1744 aa17.52■□□□□ 0.39
CCDC13-209ENST00000496027 KCNQ3O43525 872 aa17.51■□□□□ 0.39
CCDC13-209ENST00000496027 COL15A1P39059 1388 aa17.51■□□□□ 0.39
CCDC13-209ENST00000496027 YY1P25490 414 aa17.5■□□□□ 0.39
CCDC13-209ENST00000496027 USPL1Q5W0Q7 1092 aa17.5■□□□□ 0.39
CCDC13-209ENST00000496027 NLGN2Q8NFZ4 835 aa17.5■□□□□ 0.39
CCDC13-209ENST00000496027 USP16Q9Y5T5 823 aa17.5■□□□□ 0.39
CCDC13-209ENST00000496027 RGL2O15211 777 aa17.49■□□□□ 0.39
CCDC13-209ENST00000496027 ANP32CO43423 234 aa17.49■□□□□ 0.39
CCDC13-209ENST00000496027 FKBP8Q14318 412 aa17.49■□□□□ 0.39
CCDC13-209ENST00000496027 SRP68Q9UHB9 627 aaKnown RBP17.49■□□□□ 0.39
CCDC13-209ENST00000496027 A1BGP04217 495 aa17.48■□□□□ 0.39
CCDC13-209ENST00000496027 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
CCDC13-209ENST00000496027 KIF13BQ9NQT8 1826 aa17.47■□□□□ 0.39
CCDC13-209ENST00000496027 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
CCDC13-209ENST00000496027 GIGYF1O75420 1035 aaPredicted RBP17.46■□□□□ 0.39
CCDC13-209ENST00000496027 EIF4A1P60842 406 aaKnown RBP17.46■□□□□ 0.39
CCDC13-209ENST00000496027 CLEC4GQ6UXB4 293 aa17.46■□□□□ 0.39
CCDC13-209ENST00000496027 TSPYL4Q9UJ04 414 aa17.45■□□□□ 0.38
CCDC13-209ENST00000496027 KDM3BQ7LBC6 1761 aa17.44■□□□□ 0.38
CCDC13-209ENST00000496027 POLRMTO00411 1230 aaKnown RBP17.44■□□□□ 0.38
CCDC13-209ENST00000496027 CALD1Q05682 793 aaKnown RBP17.44■□□□□ 0.38
CCDC13-209ENST00000496027 NFIXQ14938 502 aa17.44■□□□□ 0.38
CCDC13-209ENST00000496027 NEUROD2Q15784 382 aa17.44■□□□□ 0.38
CCDC13-209ENST00000496027 CCDC146Q8IYE0 955 aa17.44■□□□□ 0.38
CCDC13-209ENST00000496027 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
CCDC13-209ENST00000496027 ZNF652Q9Y2D9 606 aa17.44■□□□□ 0.38
CCDC13-209ENST00000496027 SERPINB2P05120 415 aa17.43■□□□□ 0.38
CCDC13-209ENST00000496027 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
CCDC13-209ENST00000496027 SETDB2Q96T68 719 aa17.43■□□□□ 0.38
CCDC13-209ENST00000496027 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
CCDC13-209ENST00000496027 BCL2L12Q9HB09 334 aa17.43■□□□□ 0.38
CCDC13-209ENST00000496027 TBC1D2BQ9UPU7 963 aa17.43■□□□□ 0.38
CCDC13-209ENST00000496027 ZNF330Q9Y3S2 320 aaPredicted RBP17.43■□□□□ 0.38
CCDC13-209ENST00000496027 C10orf71Q711Q0 1435 aa17.42■□□□□ 0.38
CCDC13-209ENST00000496027 DDR1Q08345 913 aa17.42■□□□□ 0.38
CCDC13-209ENST00000496027 ERBB4Q15303 1308 aa17.42■□□□□ 0.38
CCDC13-209ENST00000496027 A0A0G2JLW4 131 aa17.41■□□□□ 0.38
CCDC13-209ENST00000496027 PRAMEF22A3QJZ6 481 aa17.41■□□□□ 0.38
CCDC13-209ENST00000496027 CHL1O00533 1208 aa17.41■□□□□ 0.38
CCDC13-209ENST00000496027 YBX3P16989 372 aaKnown RBP eCLIP17.41■□□□□ 0.38
CCDC13-209ENST00000496027 PIM2Q9P1W9 311 aa17.41■□□□□ 0.38
CCDC13-209ENST00000496027 TRIM35Q9UPQ4 493 aa17.41■□□□□ 0.38
CCDC13-209ENST00000496027 CAMTA2O94983 1202 aa17.4■□□□□ 0.38
CCDC13-209ENST00000496027 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
CCDC13-209ENST00000496027 CHMP4AQ9BY43 222 aa17.4■□□□□ 0.38
CCDC13-209ENST00000496027 RRP7AQ9Y3A4 280 aaKnown RBP17.4■□□□□ 0.38
CCDC13-209ENST00000496027 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
CCDC13-209ENST00000496027 ERVV-1B6SEH8 477 aa17.39■□□□□ 0.37
CCDC13-209ENST00000496027 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
CCDC13-209ENST00000496027 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
CCDC13-209ENST00000496027 CFAP44Q96MT7 982 aa17.39■□□□□ 0.37
CCDC13-209ENST00000496027 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
CCDC13-209ENST00000496027 AFDNP55196 1824 aaKnown RBP17.38■□□□□ 0.37
CCDC13-209ENST00000496027 APAF1O14727 1248 aa17.38■□□□□ 0.37
CCDC13-209ENST00000496027 DPEP1P16444 411 aa17.38■□□□□ 0.37
CCDC13-209ENST00000496027 PDE6BP35913 854 aa17.38■□□□□ 0.37
CCDC13-209ENST00000496027 TBC1D9BQ66K14 1250 aa17.38■□□□□ 0.37
CCDC13-209ENST00000496027 CARMIL3Q8ND23 1372 aa17.38■□□□□ 0.37
CCDC13-209ENST00000496027 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
CCDC13-209ENST00000496027 H0YIN7 160 aa17.37■□□□□ 0.37
CCDC13-209ENST00000496027 KCNA3P22001 575 aa17.37■□□□□ 0.37
CCDC13-209ENST00000496027 BICDL1Q6ZP65 573 aa17.37■□□□□ 0.37
CCDC13-209ENST00000496027 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
CCDC13-209ENST00000496027 MRS2Q9HD23 443 aa17.37■□□□□ 0.37
CCDC13-209ENST00000496027 NRXN2Q9P2S2 1712 aa17.37■□□□□ 0.37
CCDC13-209ENST00000496027 PXDNLA1KZ92 1463 aa17.37■□□□□ 0.37
CCDC13-209ENST00000496027 NPHP1O15259 732 aa17.36■□□□□ 0.37
CCDC13-209ENST00000496027 HOXB7P09629 217 aa17.36■□□□□ 0.37
CCDC13-209ENST00000496027 GNAI1P63096 354 aa17.36■□□□□ 0.37
CCDC13-209ENST00000496027 DALRD3Q5D0E6 543 aaKnown RBP17.36■□□□□ 0.37
CCDC13-209ENST00000496027 TPTE2Q6XPS3 522 aa17.36■□□□□ 0.37
CCDC13-209ENST00000496027 BCS1LQ9Y276 419 aa17.36■□□□□ 0.37
CCDC13-209ENST00000496027 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
CCDC13-209ENST00000496027 KIF6Q6ZMV9 814 aa17.35■□□□□ 0.37
CCDC13-209ENST00000496027 ST5P78524 1137 aa17.34■□□□□ 0.37
CCDC13-209ENST00000496027 SCN7AQ01118 1682 aa17.34■□□□□ 0.37
CCDC13-209ENST00000496027 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
CCDC13-209ENST00000496027 KIAA1551Q9HCM1 1747 aa17.34■□□□□ 0.37
CCDC13-209ENST00000496027 IFT57Q9NWB7 429 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms