RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 TSEN2Q8NCE0 465 aaKnown RBP10.74□□□□□ -0.69
CCDC39-207ENST00000495817 GAS2L2Q8NHY3 880 aa10.73□□□□□ -0.69
CCDC39-207ENST00000495817 FAM200AQ8TCP9 573 aa10.73□□□□□ -0.69
CCDC39-207ENST00000495817 GAS2L1Q99501 681 aaPredicted RBP10.73□□□□□ -0.69
CCDC39-207ENST00000495817 ZDHHC3Q9NYG2 299 aa10.73□□□□□ -0.69
CCDC39-207ENST00000495817 CABP1Q9NZU7 370 aa10.73□□□□□ -0.69
CCDC39-207ENST00000495817 NOVA2Q9UNW9 492 aaKnown RBP10.73□□□□□ -0.69
CCDC39-207ENST00000495817 CHMP3Q9Y3E7 222 aa10.73□□□□□ -0.69
CCDC39-207ENST00000495817 USP3Q9Y6I4 520 aa10.73□□□□□ -0.69
CCDC39-207ENST00000495817 HIRAP54198 1017 aaPredicted RBP10.72□□□□□ -0.69
CCDC39-207ENST00000495817 RIPOR1Q6ZS17 1223 aa10.72□□□□□ -0.69
CCDC39-207ENST00000495817 SV2AQ7L0J3 742 aa10.72□□□□□ -0.69
CCDC39-207ENST00000495817 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
CCDC39-207ENST00000495817 CSB-PGBD3P0DP91 1061 aa10.71□□□□□ -0.69
CCDC39-207ENST00000495817 SWI5Q1ZZU3 235 aa10.71□□□□□ -0.69
CCDC39-207ENST00000495817 POTEAQ6S8J7 498 aa10.71□□□□□ -0.69
CCDC39-207ENST00000495817 PGBD3Q8N328 593 aa10.71□□□□□ -0.69
CCDC39-207ENST00000495817 STAG2Q8N3U4 1231 aa10.71□□□□□ -0.69
CCDC39-207ENST00000495817 TSPAN10Q9H1Z9 355 aaPredicted RBP10.71□□□□□ -0.69
CCDC39-207ENST00000495817 CDC14CA4D256 554 aa10.7□□□□□ -0.7
CCDC39-207ENST00000495817 TATP17735 454 aaPredicted RBP10.7□□□□□ -0.7
CCDC39-207ENST00000495817 MSX1P28360 303 aa10.7□□□□□ -0.7
CCDC39-207ENST00000495817 CDCA8Q53HL2 280 aa10.7□□□□□ -0.7
CCDC39-207ENST00000495817 ZNF837Q96EG3 531 aaPredicted RBP10.7□□□□□ -0.7
CCDC39-207ENST00000495817 CRISPLD1Q9H336 500 aa10.7□□□□□ -0.7
CCDC39-207ENST00000495817 GPC6Q9Y625 555 aaPredicted RBP10.7□□□□□ -0.7
CCDC39-207ENST00000495817 ACIN1Q9UKV3 1341 aaKnown RBP10.69□□□□□ -0.7
CCDC39-207ENST00000495817 SERTM1A2A2V5 107 aa10.69□□□□□ -0.7
CCDC39-207ENST00000495817 WIPF1O43516 503 aa10.69□□□□□ -0.7
CCDC39-207ENST00000495817 ATP4AP20648 1035 aa10.69□□□□□ -0.7
CCDC39-207ENST00000495817 NOS2P35228 1153 aa10.69□□□□□ -0.7
CCDC39-207ENST00000495817 LCE2CQ5TA81 110 aa10.69□□□□□ -0.7
CCDC39-207ENST00000495817 FOXR1Q6PIV2 292 aa10.69□□□□□ -0.7
CCDC39-207ENST00000495817 NUCKS1Q9H1E3 243 aaKnown RBP10.69□□□□□ -0.7
CCDC39-207ENST00000495817 GPAMQ9HCL2 828 aa10.69□□□□□ -0.7
CCDC39-207ENST00000495817 CUEDC1Q9NWM3 386 aaPredicted RBP10.69□□□□□ -0.7
CCDC39-207ENST00000495817 ZMIZ1Q9ULJ6 1067 aa10.69□□□□□ -0.7
CCDC39-207ENST00000495817 EFHC2Q5JST6 749 aa10.68□□□□□ -0.7
CCDC39-207ENST00000495817 VWA5B2Q8N398 1253 aa10.68□□□□□ -0.7
CCDC39-207ENST00000495817 ZDHHC1Q8WTX9 485 aa10.68□□□□□ -0.7
CCDC39-207ENST00000495817 L3MBTL2Q969R5 705 aa10.68□□□□□ -0.7
CCDC39-207ENST00000495817 HINFPQ9BQA5 517 aa10.68□□□□□ -0.7
CCDC39-207ENST00000495817 TRAIPQ9BWF2 469 aa10.68□□□□□ -0.7
CCDC39-207ENST00000495817 EML1O00423 815 aa10.67□□□□□ -0.7
CCDC39-207ENST00000495817 IGFBP4P22692 258 aa10.67□□□□□ -0.7
CCDC39-207ENST00000495817 AIDAQ96BJ3 306 aa10.67□□□□□ -0.7
CCDC39-207ENST00000495817 ZNF232Q9UNY5 417 aa10.67□□□□□ -0.7
CCDC39-207ENST00000495817 C21orf2O43822 256 aa10.66□□□□□ -0.7
CCDC39-207ENST00000495817 PPP1R12BO60237 982 aaPredicted RBP10.66□□□□□ -0.7
CCDC39-207ENST00000495817 GMPRP36959 345 aa10.66□□□□□ -0.7
CCDC39-207ENST00000495817 DBN1Q16643 649 aa10.66□□□□□ -0.7
CCDC39-207ENST00000495817 TBCELQ5QJ74 424 aa10.66□□□□□ -0.7
CCDC39-207ENST00000495817 TRIM26Q12899 539 aaPredicted RBP10.65□□□□□ -0.7
CCDC39-207ENST00000495817 NLRP8Q86W28 1048 aa10.65□□□□□ -0.7
CCDC39-207ENST00000495817 STK32AQ8WU08 396 aa10.65□□□□□ -0.7
CCDC39-207ENST00000495817 SCG3Q8WXD2 468 aaKnown RBP10.65□□□□□ -0.7
CCDC39-207ENST00000495817 TRERF1Q96PN7 1200 aa10.65□□□□□ -0.7
CCDC39-207ENST00000495817 ATAD2Q6PL18 1390 aa10.65□□□□□ -0.71
CCDC39-207ENST00000495817 WEE1P30291 646 aa10.64□□□□□ -0.71
CCDC39-207ENST00000495817 C1orf53Q5VUE5 145 aa10.64□□□□□ -0.71
CCDC39-207ENST00000495817 FIGNL1Q6PIW4 674 aa10.64□□□□□ -0.71
CCDC39-207ENST00000495817 C2orf49Q9BVC5 232 aaPredicted RBP10.64□□□□□ -0.71
CCDC39-207ENST00000495817 RUBCNLQ9H714 662 aa10.64□□□□□ -0.71
CCDC39-207ENST00000495817 FOXO3O43524 673 aa10.63□□□□□ -0.71
CCDC39-207ENST00000495817 PDE4CQ08493 712 aa10.63□□□□□ -0.71
CCDC39-207ENST00000495817 RETREG2Q8NC44 543 aa10.63□□□□□ -0.71
CCDC39-207ENST00000495817 PARP3Q9Y6F1 533 aa10.63□□□□□ -0.71
CCDC39-207ENST00000495817 TXLNAP40222 546 aa10.62□□□□□ -0.71
CCDC39-207ENST00000495817 ARSJQ5FYB0 599 aaPredicted RBP10.62□□□□□ -0.71
CCDC39-207ENST00000495817 GTPBP3Q969Y2 492 aaKnown RBP10.62□□□□□ -0.71
CCDC39-207ENST00000495817 PHF24Q9UPV7 400 aa10.62□□□□□ -0.71
CCDC39-207ENST00000495817 THBS1P07996 1170 aa10.61□□□□□ -0.71
CCDC39-207ENST00000495817 FAM69CQ0P6D2 419 aa10.61□□□□□ -0.71
CCDC39-207ENST00000495817 TMEM164Q5U3C3 297 aa10.61□□□□□ -0.71
CCDC39-207ENST00000495817 GPR161Q8N6U8 529 aaKnown RBP10.61□□□□□ -0.71
CCDC39-207ENST00000495817 CFHR5Q9BXR6 569 aa10.61□□□□□ -0.71
CCDC39-207ENST00000495817 COL25A1Q9BXS0 654 aaPredicted RBP10.61□□□□□ -0.71
CCDC39-207ENST00000495817 A0A1W2PNR3 127 aa10.6□□□□□ -0.71
CCDC39-207ENST00000495817 INSM1Q01101 510 aaPredicted RBP10.6□□□□□ -0.71
CCDC39-207ENST00000495817 HIF1AQ16665 826 aa10.6□□□□□ -0.71
CCDC39-207ENST00000495817 BICDL1Q6ZP65 573 aa10.6□□□□□ -0.71
CCDC39-207ENST00000495817 PODXL2Q9NZ53 605 aa10.6□□□□□ -0.71
CCDC39-207ENST00000495817 UBAP2LQ14157 1087 aaKnown RBP10.59□□□□□ -0.71
CCDC39-207ENST00000495817 SH3PXD2AQ5TCZ1 1133 aa10.59□□□□□ -0.71
CCDC39-207ENST00000495817 SAMD5Q5TGI4 173 aa10.59□□□□□ -0.71
CCDC39-207ENST00000495817 CLP1Q92989 425 aaKnown RBP10.59□□□□□ -0.71
CCDC39-207ENST00000495817 ZIC5Q96T25 663 aa10.59□□□□□ -0.71
CCDC39-207ENST00000495817 ATXN7L1Q9ULK2 861 aaPredicted RBP10.59□□□□□ -0.71
CCDC39-207ENST00000495817 ZBTB7CA1YPR0 619 aa10.58□□□□□ -0.72
CCDC39-207ENST00000495817 KCTD17Q8N5Z5 321 aa10.58□□□□□ -0.72
CCDC39-207ENST00000495817 RHPN1Q8TCX5 695 aa10.58□□□□□ -0.72
CCDC39-207ENST00000495817 CHMP7Q8WUX9 453 aaPredicted RBP10.58□□□□□ -0.72
CCDC39-207ENST00000495817 PHACTR1Q9C0D0 580 aa10.58□□□□□ -0.72
CCDC39-207ENST00000495817 GJA3Q9Y6H8 435 aa10.58□□□□□ -0.72
CCDC39-207ENST00000495817 GAS6Q14393 721 aa10.57□□□□□ -0.72
CCDC39-207ENST00000495817 OCLNQ16625 522 aa10.57□□□□□ -0.72
CCDC39-207ENST00000495817 MBIPQ9NS73 344 aa10.57□□□□□ -0.72
CCDC39-207ENST00000495817 PCDHGC4Q9Y5F7 938 aa10.57□□□□□ -0.72
CCDC39-207ENST00000495817 KRT76Q01546 638 aa10.56□□□□□ -0.72
CCDC39-207ENST00000495817 RTN1Q16799 776 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms