RNA–Protein interactions for RNA: ENST00000495656.5

ITSN1-232, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 535 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-232ENST00000495656 IGSF1Q8N6C5 1336 aa9.57□□□□□ -0.88
ITSN1-232ENST00000495656 BRCA1P38398 1863 aaKnown RBP9.57□□□□□ -0.88
ITSN1-232ENST00000495656 STK25O00506 426 aa9.57□□□□□ -0.88
ITSN1-232ENST00000495656 PHKG2P15735 406 aa9.57□□□□□ -0.88
ITSN1-232ENST00000495656 SSFA2P28290 1259 aa9.57□□□□□ -0.88
ITSN1-232ENST00000495656 CDCA8Q53HL2 280 aa9.57□□□□□ -0.88
ITSN1-232ENST00000495656 SLC4A9Q96Q91 983 aa9.57□□□□□ -0.88
ITSN1-232ENST00000495656 SPG7Q9UQ90 795 aa9.57□□□□□ -0.88
ITSN1-232ENST00000495656 CICQ96RK0 1608 aaPredicted RBP9.56□□□□□ -0.88
ITSN1-232ENST00000495656 KDRP35968 1356 aa9.56□□□□□ -0.88
ITSN1-232ENST00000495656 GNPATO15228 680 aa9.56□□□□□ -0.88
ITSN1-232ENST00000495656 MKRN3Q13064 507 aaKnown RBP9.56□□□□□ -0.88
ITSN1-232ENST00000495656 EIF4A2Q14240 407 aaKnown RBP9.56□□□□□ -0.88
ITSN1-232ENST00000495656 ZNF526Q8TF50 670 aaPredicted RBP9.56□□□□□ -0.88
ITSN1-232ENST00000495656 ATG3Q9NT62 314 aa9.56□□□□□ -0.88
ITSN1-232ENST00000495656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.56□□□□□ -0.88
ITSN1-232ENST00000495656 TMOD3Q9NYL9 352 aa9.56□□□□□ -0.88
ITSN1-232ENST00000495656 PXDNLA1KZ92 1463 aa9.55□□□□□ -0.88
ITSN1-232ENST00000495656 ATP6V1AP38606 617 aa9.55□□□□□ -0.88
ITSN1-232ENST00000495656 TNNT2P45379 298 aaPredicted RBP9.55□□□□□ -0.88
ITSN1-232ENST00000495656 IFNL2Q8IZJ0 200 aa9.55□□□□□ -0.88
ITSN1-232ENST00000495656 GPBP1L1Q9HC44 474 aaPredicted RBP9.55□□□□□ -0.88
ITSN1-232ENST00000495656 STK24Q9Y6E0 443 aa9.55□□□□□ -0.88
ITSN1-232ENST00000495656 METRNQ9UJH8 293 aa9.54□□□□□ -0.88
ITSN1-232ENST00000495656 KDM6AO15550 1401 aaPredicted RBP9.54□□□□□ -0.88
ITSN1-232ENST00000495656 VIRMAQ69YN4 1812 aaKnown RBP9.54□□□□□ -0.88
ITSN1-232ENST00000495656 TJP1Q07157 1748 aa9.53□□□□□ -0.88
ITSN1-232ENST00000495656 ADAMTS7Q9UKP4 1686 aa9.53□□□□□ -0.88
ITSN1-232ENST00000495656 MMP10P09238 476 aa9.53□□□□□ -0.88
ITSN1-232ENST00000495656 HMGB2P26583 209 aaKnown RBP9.53□□□□□ -0.88
ITSN1-232ENST00000495656 HS6ST3Q8IZP7 471 aa9.53□□□□□ -0.88
ITSN1-232ENST00000495656 SCN11AQ9UI33 1791 aa9.52□□□□□ -0.88
ITSN1-232ENST00000495656 ARFGEF1Q9Y6D6 1849 aa9.52□□□□□ -0.89
ITSN1-232ENST00000495656 KIF3CO14782 793 aa9.52□□□□□ -0.89
ITSN1-232ENST00000495656 TRIM26Q12899 539 aaPredicted RBP9.52□□□□□ -0.89
ITSN1-232ENST00000495656 C10orf71Q711Q0 1435 aa9.52□□□□□ -0.89
ITSN1-232ENST00000495656 A0A0G2JLW4 131 aa9.51□□□□□ -0.89
ITSN1-232ENST00000495656 SEC24BO95487 1268 aa9.51□□□□□ -0.89
ITSN1-232ENST00000495656 HSPA6P17066 643 aa9.51□□□□□ -0.89
ITSN1-232ENST00000495656 IFFO2Q5TF58 517 aa9.51□□□□□ -0.89
ITSN1-232ENST00000495656 AEBP1Q8IUX7 1158 aa9.51□□□□□ -0.89
ITSN1-232ENST00000495656 ARHGEF1Q92888 912 aaKnown RBP9.51□□□□□ -0.89
ITSN1-232ENST00000495656 POLR3GLQ9BT43 218 aa9.51□□□□□ -0.89
ITSN1-232ENST00000495656 PLEKHG2Q9H7P9 1386 aa9.5□□□□□ -0.89
ITSN1-232ENST00000495656 ERVV-2B6SEH9 535 aa9.5□□□□□ -0.89
ITSN1-232ENST00000495656 GYS1P13807 737 aa9.5□□□□□ -0.89
ITSN1-232ENST00000495656 KCNA3P22001 575 aa9.5□□□□□ -0.89
ITSN1-232ENST00000495656 TRAPPC3LQ5T215 181 aa9.5□□□□□ -0.89
ITSN1-232ENST00000495656 DCAF5Q96JK2 942 aa9.5□□□□□ -0.89
ITSN1-232ENST00000495656 RTCBQ9Y3I0 505 aaKnown RBP9.5□□□□□ -0.89
ITSN1-232ENST00000495656 SBF1O95248 1867 aa9.49□□□□□ -0.89
ITSN1-232ENST00000495656 RPS6KA4O75676 772 aa9.49□□□□□ -0.89
ITSN1-232ENST00000495656 DPEP1P16444 411 aa9.49□□□□□ -0.89
ITSN1-232ENST00000495656 RC3H1Q5TC82 1133 aaKnown RBP9.49□□□□□ -0.89
ITSN1-232ENST00000495656 EFCAB3Q8N7B9 438 aa9.49□□□□□ -0.89
ITSN1-232ENST00000495656 PANK3Q9H999 370 aa9.49□□□□□ -0.89
ITSN1-232ENST00000495656 BCS1LQ9Y276 419 aa9.49□□□□□ -0.89
ITSN1-232ENST00000495656 CNTNAP4Q9C0A0 1308 aa9.49□□□□□ -0.89
ITSN1-232ENST00000495656 AFDNP55196 1824 aaKnown RBP9.48□□□□□ -0.89
ITSN1-232ENST00000495656 PTCD1O75127 700 aaKnown RBP9.48□□□□□ -0.89
ITSN1-232ENST00000495656 PLCG2P16885 1265 aa9.48□□□□□ -0.89
ITSN1-232ENST00000495656 TGFB2P61812 414 aa9.48□□□□□ -0.89
ITSN1-232ENST00000495656 ZNF530Q6P9A1 599 aaPredicted RBP9.48□□□□□ -0.89
ITSN1-232ENST00000495656 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
ITSN1-232ENST00000495656 OCEL1Q9H607 264 aa9.48□□□□□ -0.89
ITSN1-232ENST00000495656 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
ITSN1-232ENST00000495656 HSPA5P11021 654 aaKnown RBP9.47□□□□□ -0.89
ITSN1-232ENST00000495656 RFC4P35249 363 aa9.47□□□□□ -0.89
ITSN1-232ENST00000495656 CRKLP46109 303 aaKnown RBP9.47□□□□□ -0.89
ITSN1-232ENST00000495656 CABP4P57796 275 aa9.47□□□□□ -0.89
ITSN1-232ENST00000495656 IRX5P78411 483 aaPredicted RBP9.47□□□□□ -0.89
ITSN1-232ENST00000495656 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
ITSN1-232ENST00000495656 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
ITSN1-232ENST00000495656 SRP68Q9UHB9 627 aaKnown RBP9.47□□□□□ -0.89
ITSN1-232ENST00000495656 WDR90Q96KV7 1748 aa9.46□□□□□ -0.89
ITSN1-232ENST00000495656 HSP90AB1P08238 724 aaKnown RBP9.46□□□□□ -0.9
ITSN1-232ENST00000495656 MTHFSP49914 203 aa9.46□□□□□ -0.9
ITSN1-232ENST00000495656 DDR1Q08345 913 aa9.46□□□□□ -0.9
ITSN1-232ENST00000495656 ARHGAP27Q6ZUM4 889 aa9.46□□□□□ -0.9
ITSN1-232ENST00000495656 NMRK2Q9NPI5 230 aa9.46□□□□□ -0.9
ITSN1-232ENST00000495656 NRXN2Q9P2S2 1712 aa9.45□□□□□ -0.9
ITSN1-232ENST00000495656 FCHSD2O94868 740 aa9.45□□□□□ -0.9
ITSN1-232ENST00000495656 IL13P35225 146 aa9.45□□□□□ -0.9
ITSN1-232ENST00000495656 AMOTQ4VCS5 1084 aa9.45□□□□□ -0.9
ITSN1-232ENST00000495656 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
ITSN1-232ENST00000495656 INTS5Q6P9B9 1019 aaKnown RBP9.45□□□□□ -0.9
ITSN1-232ENST00000495656 DNAJC5GQ8N7S2 189 aa9.45□□□□□ -0.9
ITSN1-232ENST00000495656 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
ITSN1-232ENST00000495656 PARP3Q9Y6F1 533 aa9.45□□□□□ -0.9
ITSN1-232ENST00000495656 USP42Q9H9J4 1324 aaKnown RBP9.45□□□□□ -0.9
ITSN1-232ENST00000495656 DLEC1Q9Y238 1755 aa9.45□□□□□ -0.9
ITSN1-232ENST00000495656 CCDC88AQ3V6T2 1871 aa9.45□□□□□ -0.9
ITSN1-232ENST00000495656 TOMM70O94826 608 aa9.44□□□□□ -0.9
ITSN1-232ENST00000495656 EIF4G2P78344 907 aaKnown RBP eCLIP9.44□□□□□ -0.9
ITSN1-232ENST00000495656 PCGF6Q9BYE7 350 aa9.44□□□□□ -0.9
ITSN1-232ENST00000495656 LGR6Q9HBX8 967 aa9.44□□□□□ -0.9
ITSN1-232ENST00000495656 KCPQ6ZWJ8 1503 aa9.44□□□□□ -0.9
ITSN1-232ENST00000495656 UBR2Q8IWV8 1755 aa9.44□□□□□ -0.9
ITSN1-232ENST00000495656 MRC1P22897 1456 aa9.43□□□□□ -0.9
ITSN1-232ENST00000495656 CLSPNQ9HAW4 1339 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms