RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 NPHP1O15259 732 aa7.4□□□□□ -1.23
FGD4-208ENST00000494977 PPFIA2O75334 1257 aa7.4□□□□□ -1.23
FGD4-208ENST00000494977 TUBB4AP04350 444 aa7.4□□□□□ -1.23
FGD4-208ENST00000494977 TBC1D8BQ0IIM8 1120 aa7.4□□□□□ -1.23
FGD4-208ENST00000494977 GRIK3Q13003 919 aa7.4□□□□□ -1.23
FGD4-208ENST00000494977 ZSCAN25Q6NSZ9 544 aa7.4□□□□□ -1.23
FGD4-208ENST00000494977 ANKRD18AQ8IVF6 992 aa7.4□□□□□ -1.23
FGD4-208ENST00000494977 UBXN4Q92575 508 aa7.4□□□□□ -1.23
FGD4-208ENST00000494977 RBM42Q9BTD8 480 aaKnown RBP7.4□□□□□ -1.23
FGD4-208ENST00000494977 KDM4CQ9H3R0 1056 aa7.4□□□□□ -1.23
FGD4-208ENST00000494977 SMC3Q9UQE7 1217 aa7.4□□□□□ -1.23
FGD4-208ENST00000494977 A0A1B0GUA9 196 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 MYBL2P10244 700 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 ABCD1P33897 745 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 ZRSR2Q15696 482 aaKnown RBP7.39□□□□□ -1.23
FGD4-208ENST00000494977 NYAP1Q6ZVC0 841 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 WDR63Q8IWG1 891 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 ZNF483Q8TF39 744 aaPredicted RBP7.39□□□□□ -1.23
FGD4-208ENST00000494977 N4BP2L2Q92802 583 aaPredicted RBP7.39□□□□□ -1.23
FGD4-208ENST00000494977 UTP14AQ9BVJ6 771 aaKnown RBP7.39□□□□□ -1.23
FGD4-208ENST00000494977 ZDHHC9Q9Y397 364 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 MBD5Q9P267 1494 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 SAMD9Q5K651 1589 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 MAGEA8P43361 318 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 HSP90AB4PQ58FF6 505 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 TRIM74Q86UV6 250 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 TRIM73Q86UV7 250 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 JPH2Q9BR39 696 aaPredicted RBP7.39□□□□□ -1.23
FGD4-208ENST00000494977 SRRTQ9BXP5 876 aaKnown RBP7.39□□□□□ -1.23
FGD4-208ENST00000494977 L2HGDHQ9H9P8 463 aa7.39□□□□□ -1.23
FGD4-208ENST00000494977 ZCCHC17Q9NP64 241 aaKnown RBP7.39□□□□□ -1.23
FGD4-208ENST00000494977 CHCHD3Q9NX63 227 aaKnown RBP7.39□□□□□ -1.23
FGD4-208ENST00000494977 SNUPNO95149 360 aaKnown RBP7.38□□□□□ -1.23
FGD4-208ENST00000494977 RPS6KA3P51812 740 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 DDR1Q08345 913 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 PSMD2Q13200 908 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 SF3A1Q15459 793 aaKnown RBP7.38□□□□□ -1.23
FGD4-208ENST00000494977 MCM8Q9UJA3 840 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 RAD54L2Q9Y4B4 1467 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 TOP2BQ02880 1626 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 ERBB3P21860 1342 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 SOS1Q07889 1333 aaPredicted RBP7.38□□□□□ -1.23
FGD4-208ENST00000494977 GAPVD1Q14C86 1478 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 RALGAPBQ86X10 1494 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 PES1O00541 588 aaKnown RBP7.38□□□□□ -1.23
FGD4-208ENST00000494977 PRPHP41219 470 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 CCDC158Q5M9N0 1113 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 MSL3Q8N5Y2 521 aaKnown RBP7.38□□□□□ -1.23
FGD4-208ENST00000494977 BAG1Q99933 345 aaPredicted RBP7.38□□□□□ -1.23
FGD4-208ENST00000494977 CARD11Q9BXL7 1154 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 ACBD3Q9H3P7 528 aa7.38□□□□□ -1.23
FGD4-208ENST00000494977 PCF11O94913 1555 aaKnown RBP7.37□□□□□ -1.23
FGD4-208ENST00000494977 PER1O15534 1290 aaPredicted RBP7.37□□□□□ -1.23
FGD4-208ENST00000494977 PPFIA4O75335 1185 aa7.37□□□□□ -1.23
FGD4-208ENST00000494977 RLBP1P12271 317 aa7.37□□□□□ -1.23
FGD4-208ENST00000494977 GPTP24298 496 aa7.37□□□□□ -1.23
FGD4-208ENST00000494977 MRPL12P52815 198 aaKnown RBP7.37□□□□□ -1.23
FGD4-208ENST00000494977 SCRN1Q12765 414 aa7.37□□□□□ -1.23
FGD4-208ENST00000494977 LRMPQ12912 555 aa7.37□□□□□ -1.23
FGD4-208ENST00000494977 CWC27Q6UX04 472 aaKnown RBP7.37□□□□□ -1.23
FGD4-208ENST00000494977 CRACR2AQ9BSW2 395 aa7.37□□□□□ -1.23
FGD4-208ENST00000494977 ARFGAP3Q9NP61 516 aa7.37□□□□□ -1.23
FGD4-208ENST00000494977 ORC3Q9UBD5 711 aaPredicted RBP7.37□□□□□ -1.23
FGD4-208ENST00000494977 CHUKO15111 745 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 BRD1O95696 1058 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 TBC1D8O95759 1140 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 CCDC192P0DO97 292 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 CD151P48509 253 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 MVPQ14764 893 aaKnown RBP7.36□□□□□ -1.23
FGD4-208ENST00000494977 SLC5A9Q2M3M2 681 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 KIAA1328Q86T90 577 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 DRAXINQ8NBI3 349 aaPredicted RBP7.36□□□□□ -1.23
FGD4-208ENST00000494977 THOC1Q96FV9 657 aaKnown RBP7.36□□□□□ -1.23
FGD4-208ENST00000494977 CABS1Q96KC9 395 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 ODF2LQ9ULJ1 636 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 AP5Z1O43299 807 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 PECAM1P16284 738 aaPredicted RBP7.36□□□□□ -1.23
FGD4-208ENST00000494977 POLD1P28340 1107 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 GCKP35557 465 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 LRRC31Q6UY01 552 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 ZGPATQ8N5A5 531 aaKnown RBP7.36□□□□□ -1.23
FGD4-208ENST00000494977 KCND1Q9NSA2 647 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.36□□□□□ -1.23
FGD4-208ENST00000494977 ROCK1Q13464 1354 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 PLB1Q6P1J6 1458 aa7.36□□□□□ -1.23
FGD4-208ENST00000494977 CDKL5O76039 1030 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 CCNHP51946 323 aaPredicted RBP7.35□□□□□ -1.23
FGD4-208ENST00000494977 CCDC27Q2M243 656 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 CPLX2Q6PUV4 134 aaKnown RBP7.35□□□□□ -1.23
FGD4-208ENST00000494977 TBC1D9Q6ZT07 1266 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 TMEM87AQ8NBN3 555 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 FAM200AQ8TCP9 573 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 RRP7BPQ9NSQ0 103 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 ATP10AO60312 1499 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 REREQ9P2R6 1566 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 ST20-MTHFSA0A0A6YYL1 179 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 EFCAB8A8MWE9 144 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 UBE2HP62256 183 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 NUCB1Q02818 461 aa7.35□□□□□ -1.23
FGD4-208ENST00000494977 PREPLQ4J6C6 727 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms