RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 PRKRIP1Q9H875 184 aaPredicted RBP23.82■■□□□ 1.4
COL20A1-207ENST00000494913 CANXP27824 592 aaKnown RBP23.81■■□□□ 1.4
COL20A1-207ENST00000494913 NFE2L2Q16236 605 aa23.81■■□□□ 1.4
COL20A1-207ENST00000494913 USP42Q9H9J4 1324 aaKnown RBP23.81■■□□□ 1.4
COL20A1-207ENST00000494913 ZPR1O75312 459 aa23.81■■□□□ 1.4
COL20A1-207ENST00000494913 C4AP0C0L4 1744 aa23.8■■□□□ 1.4
COL20A1-207ENST00000494913 FKBP8Q14318 412 aa23.8■■□□□ 1.4
COL20A1-207ENST00000494913 TAF7Q15545 349 aaPredicted RBP23.8■■□□□ 1.4
COL20A1-207ENST00000494913 PARP3Q9Y6F1 533 aa23.79■■□□□ 1.4
COL20A1-207ENST00000494913 USPL1Q5W0Q7 1092 aa23.78■■□□□ 1.4
COL20A1-207ENST00000494913 MIS18AQ9NYP9 233 aa23.78■■□□□ 1.4
COL20A1-207ENST00000494913 COL15A1P39059 1388 aa23.77■■□□□ 1.4
COL20A1-207ENST00000494913 NARFQ9UHQ1 456 aa23.76■■□□□ 1.39
COL20A1-207ENST00000494913 DLG5Q8TDM6 1919 aa23.76■■□□□ 1.39
COL20A1-207ENST00000494913 YBX3P16989 372 aaKnown RBP eCLIP23.75■■□□□ 1.39
COL20A1-207ENST00000494913 EIF5P55010 431 aaKnown RBP23.75■■□□□ 1.39
COL20A1-207ENST00000494913 THUMPD2Q9BTF0 503 aaKnown RBP23.75■■□□□ 1.39
COL20A1-207ENST00000494913 A1BGP04217 495 aa23.75■■□□□ 1.39
COL20A1-207ENST00000494913 WDR43Q15061 677 aaKnown RBP eCLIP23.75■■□□□ 1.39
COL20A1-207ENST00000494913 ZNF330Q9Y3S2 320 aaPredicted RBP23.75■■□□□ 1.39
COL20A1-207ENST00000494913 USP16Q9Y5T5 823 aa23.75■■□□□ 1.39
COL20A1-207ENST00000494913 PRAMEF22A3QJZ6 481 aa23.74■■□□□ 1.39
COL20A1-207ENST00000494913 SNRPA1P09661 255 aaKnown RBP23.74■■□□□ 1.39
COL20A1-207ENST00000494913 RIPK4P57078 832 aa23.74■■□□□ 1.39
COL20A1-207ENST00000494913 ZNF316A6NFI3 1004 aaPredicted RBP23.73■■□□□ 1.39
COL20A1-207ENST00000494913 CCDC146Q8IYE0 955 aa23.73■■□□□ 1.39
COL20A1-207ENST00000494913 WWC3Q9ULE0 1092 aa23.73■■□□□ 1.39
COL20A1-207ENST00000494913 A0A087WZG4 1122 aa23.72■■□□□ 1.39
COL20A1-207ENST00000494913 GRIN3BO60391 1043 aa23.72■■□□□ 1.39
COL20A1-207ENST00000494913 TM4SF1P30408 202 aa23.72■■□□□ 1.39
COL20A1-207ENST00000494913 DDR1Q08345 913 aa23.72■■□□□ 1.39
COL20A1-207ENST00000494913 PNISRQ8TF01 805 aaKnown RBP23.72■■□□□ 1.39
COL20A1-207ENST00000494913 IL6STP40189 918 aaPredicted RBP23.71■■□□□ 1.39
COL20A1-207ENST00000494913 ADAMTS8Q9UP79 889 aa23.71■■□□□ 1.39
COL20A1-207ENST00000494913 TMPOP42166 694 aaKnown RBP23.7■■□□□ 1.38
COL20A1-207ENST00000494913 NPM2Q86SE8 214 aaKnown RBP23.7■■□□□ 1.38
COL20A1-207ENST00000494913 BCL2L12Q9HB09 334 aa23.7■■□□□ 1.38
COL20A1-207ENST00000494913 TGFB2P61812 414 aa23.69■■□□□ 1.38
COL20A1-207ENST00000494913 TBC1D2BQ9UPU7 963 aa23.69■■□□□ 1.38
COL20A1-207ENST00000494913 RRP7AQ9Y3A4 280 aaKnown RBP23.69■■□□□ 1.38
COL20A1-207ENST00000494913 C10orf71Q711Q0 1435 aa23.69■■□□□ 1.38
COL20A1-207ENST00000494913 POLRMTO00411 1230 aaKnown RBP23.68■■□□□ 1.38
COL20A1-207ENST00000494913 PIP4K2AP48426 406 aaPredicted RBP23.68■■□□□ 1.38
COL20A1-207ENST00000494913 NFIXQ14938 502 aa23.68■■□□□ 1.38
COL20A1-207ENST00000494913 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
COL20A1-207ENST00000494913 RUNDC1Q96C34 613 aa23.68■■□□□ 1.38
COL20A1-207ENST00000494913 A0A0G2JLW4 131 aa23.68■■□□□ 1.38
COL20A1-207ENST00000494913 CHD4Q14839 1912 aa23.67■■□□□ 1.38
COL20A1-207ENST00000494913 LMOD3Q0VAK6 560 aa23.66■■□□□ 1.38
COL20A1-207ENST00000494913 PXDNLA1KZ92 1463 aa23.66■■□□□ 1.38
COL20A1-207ENST00000494913 DPEP1P16444 411 aa23.65■■□□□ 1.38
COL20A1-207ENST00000494913 EIF4A1P60842 406 aaKnown RBP23.65■■□□□ 1.38
COL20A1-207ENST00000494913 BICDL1Q6ZP65 573 aa23.65■■□□□ 1.38
COL20A1-207ENST00000494913 KIF13BQ9NQT8 1826 aa23.65■■□□□ 1.38
COL20A1-207ENST00000494913 GIGYF1O75420 1035 aaPredicted RBP23.63■■□□□ 1.37
COL20A1-207ENST00000494913 TSPYL4Q9UJ04 414 aa23.63■■□□□ 1.37
COL20A1-207ENST00000494913 NBPF26B4DH59 902 aa23.62■■□□□ 1.37
COL20A1-207ENST00000494913 SERPINB2P05120 415 aa23.62■■□□□ 1.37
COL20A1-207ENST00000494913 NBPF10Q6P3W6 841 aaKnown RBP23.62■■□□□ 1.37
COL20A1-207ENST00000494913 DZIP3Q86Y13 1208 aaKnown RBP23.62■■□□□ 1.37
COL20A1-207ENST00000494913 NBPF15Q8N660 670 aa23.62■■□□□ 1.37
COL20A1-207ENST00000494913 N4BP2Q86UW6 1770 aaPredicted RBP23.62■■□□□ 1.37
COL20A1-207ENST00000494913 TBC1D9BQ66K14 1250 aa23.62■■□□□ 1.37
COL20A1-207ENST00000494913 KDM3BQ7LBC6 1761 aa23.61■■□□□ 1.37
COL20A1-207ENST00000494913 CAMTA2O94983 1202 aa23.61■■□□□ 1.37
COL20A1-207ENST00000494913 KCNA3P22001 575 aa23.6■■□□□ 1.37
COL20A1-207ENST00000494913 ZNF784Q8NCA9 323 aaPredicted RBP23.6■■□□□ 1.37
COL20A1-207ENST00000494913 TRIM35Q9UPQ4 493 aa23.6■■□□□ 1.37
COL20A1-207ENST00000494913 BCS1LQ9Y276 419 aa23.6■■□□□ 1.37
COL20A1-207ENST00000494913 KIAA1551Q9HCM1 1747 aa23.59■■□□□ 1.37
COL20A1-207ENST00000494913 CCDC184Q52MB2 194 aa23.58■■□□□ 1.37
COL20A1-207ENST00000494913 BABAM1Q9NWV8 329 aa23.58■■□□□ 1.37
COL20A1-207ENST00000494913 CHRNA5P30532 468 aa23.57■■□□□ 1.36
COL20A1-207ENST00000494913 AFDNP55196 1824 aaKnown RBP23.56■■□□□ 1.36
COL20A1-207ENST00000494913 SETDB2Q96T68 719 aa23.56■■□□□ 1.36
COL20A1-207ENST00000494913 PIM2Q9P1W9 311 aa23.56■■□□□ 1.36
COL20A1-207ENST00000494913 SCN7AQ01118 1682 aa23.56■■□□□ 1.36
COL20A1-207ENST00000494913 ANP32CO43423 234 aa23.56■■□□□ 1.36
COL20A1-207ENST00000494913 NGEFQ8N5V2 710 aa23.56■■□□□ 1.36
COL20A1-207ENST00000494913 LAS1LQ9Y4W2 734 aaKnown RBP23.56■■□□□ 1.36
COL20A1-207ENST00000494913 APAF1O14727 1248 aa23.55■■□□□ 1.36
COL20A1-207ENST00000494913 CLEC4GQ6UXB4 293 aa23.55■■□□□ 1.36
COL20A1-207ENST00000494913 CARMIL3Q8ND23 1372 aa23.53■■□□□ 1.36
COL20A1-207ENST00000494913 NRXN2Q9P2S2 1712 aa23.53■■□□□ 1.36
COL20A1-207ENST00000494913 CHL1O00533 1208 aa23.53■■□□□ 1.36
COL20A1-207ENST00000494913 DALRD3Q5D0E6 543 aaKnown RBP23.53■■□□□ 1.36
COL20A1-207ENST00000494913 ZNF652Q9Y2D9 606 aa23.53■■□□□ 1.36
COL20A1-207ENST00000494913 LAMB4A4D0S4 1761 aa23.53■■□□□ 1.36
COL20A1-207ENST00000494913 MYL6BP14649 208 aa23.52■■□□□ 1.36
COL20A1-207ENST00000494913 EIF2S2P20042 333 aaKnown RBP23.52■■□□□ 1.36
COL20A1-207ENST00000494913 CCDC24Q8N4L8 307 aa23.52■■□□□ 1.36
COL20A1-207ENST00000494913 PRR5LQ6MZQ0 368 aa23.51■■□□□ 1.35
COL20A1-207ENST00000494913 ARHGAP27Q6ZUM4 889 aa23.51■■□□□ 1.35
COL20A1-207ENST00000494913 NPHP1O15259 732 aa23.5■■□□□ 1.35
COL20A1-207ENST00000494913 BCORQ6W2J9 1755 aa23.5■■□□□ 1.35
COL20A1-207ENST00000494913 HLFQ16534 295 aa23.49■■□□□ 1.35
COL20A1-207ENST00000494913 C2CD5Q86YS7 1000 aa23.49■■□□□ 1.35
COL20A1-207ENST00000494913 CNBD1Q8NA66 436 aa23.49■■□□□ 1.35
COL20A1-207ENST00000494913 BRCA1P38398 1863 aaKnown RBP23.49■■□□□ 1.35
COL20A1-207ENST00000494913 H0YIN7 160 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms