RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 NFATC2IPQ8NCF5 419 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 DCBLD2Q96PD2 775 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 TSHZ2Q9NRE2 1034 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 VIRMAQ69YN4 1812 aaKnown RBP8.63□□□□□ -1.03
MSH5-217ENST00000494458 TNS2Q63HR2 1409 aa8.63□□□□□ -1.03
MSH5-217ENST00000494458 SPATA31A1Q5TZJ5 1347 aa8.62□□□□□ -1.03
MSH5-217ENST00000494458 GLI3P10071 1580 aa8.62□□□□□ -1.03
MSH5-217ENST00000494458 UBAP1LF5GYI3 381 aa8.62□□□□□ -1.03
MSH5-217ENST00000494458 TCERG1O14776 1098 aaKnown RBP8.62□□□□□ -1.03
MSH5-217ENST00000494458 FLIIQ13045 1269 aa8.62□□□□□ -1.03
MSH5-217ENST00000494458 PDIA6Q15084 440 aa8.62□□□□□ -1.03
MSH5-217ENST00000494458 SMC5Q8IY18 1101 aa8.62□□□□□ -1.03
MSH5-217ENST00000494458 RWDD1Q9H446 243 aaPredicted RBP8.62□□□□□ -1.03
MSH5-217ENST00000494458 NWD2Q9ULI1 1742 aa8.62□□□□□ -1.03
MSH5-217ENST00000494458 PXDNLA1KZ92 1463 aa8.62□□□□□ -1.03
MSH5-217ENST00000494458 LRP6O75581 1613 aa8.62□□□□□ -1.03
MSH5-217ENST00000494458 SPATA31A5Q5VU36 1347 aa8.61□□□□□ -1.03
MSH5-217ENST00000494458 SPATA31A6Q5VVP1 1343 aa8.61□□□□□ -1.03
MSH5-217ENST00000494458 SPATA31A7Q8IWB4 1347 aa8.61□□□□□ -1.03
MSH5-217ENST00000494458 CCT4P50991 539 aaKnown RBP8.61□□□□□ -1.03
MSH5-217ENST00000494458 HDGFL1Q5TGJ6 251 aa8.61□□□□□ -1.03
MSH5-217ENST00000494458 ITPRIPQ8IWB1 547 aa8.61□□□□□ -1.03
MSH5-217ENST00000494458 STK31Q9BXU1 1019 aa8.61□□□□□ -1.03
MSH5-217ENST00000494458 DBF4Q9UBU7 674 aaPredicted RBP8.61□□□□□ -1.03
MSH5-217ENST00000494458 BCL9LQ86UU0 1499 aa8.61□□□□□ -1.03
MSH5-217ENST00000494458 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
MSH5-217ENST00000494458 SIRT2Q8IXJ6 389 aa8.6□□□□□ -1.03
MSH5-217ENST00000494458 ZNF496Q96IT1 587 aaPredicted RBP8.6□□□□□ -1.03
MSH5-217ENST00000494458 STRN4Q9NRL3 753 aa8.6□□□□□ -1.03
MSH5-217ENST00000494458 PAPPAQ13219 1627 aa8.6□□□□□ -1.03
MSH5-217ENST00000494458 ATP10DQ9P241 1426 aa8.6□□□□□ -1.03
MSH5-217ENST00000494458 ERBB4Q15303 1308 aa8.59□□□□□ -1.03
MSH5-217ENST00000494458 UBR2Q8IWV8 1755 aa8.59□□□□□ -1.03
MSH5-217ENST00000494458 SNRPA1P09661 255 aaKnown RBP8.59□□□□□ -1.03
MSH5-217ENST00000494458 CABP4P57796 275 aa8.59□□□□□ -1.03
MSH5-217ENST00000494458 PIP4K2BP78356 416 aa8.59□□□□□ -1.03
MSH5-217ENST00000494458 VPS72Q15906 364 aa8.59□□□□□ -1.03
MSH5-217ENST00000494458 UNC5CLQ8IV45 518 aa8.59□□□□□ -1.03
MSH5-217ENST00000494458 RPAP2Q8IXW5 612 aaPredicted RBP8.59□□□□□ -1.03
MSH5-217ENST00000494458 VSIG10Q8N0Z9 540 aa8.59□□□□□ -1.03
MSH5-217ENST00000494458 DDX21Q9NR30 783 aaKnown RBP eCLIP8.59□□□□□ -1.03
MSH5-217ENST00000494458 HYPKQ9NX55 129 aa8.59□□□□□ -1.03
MSH5-217ENST00000494458 KCPQ6ZWJ8 1503 aa8.59□□□□□ -1.03
MSH5-217ENST00000494458 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
MSH5-217ENST00000494458 PRAMEF22A3QJZ6 481 aa8.58□□□□□ -1.04
MSH5-217ENST00000494458 SLC39A6Q13433 755 aa8.58□□□□□ -1.04
MSH5-217ENST00000494458 BEND3Q5T5X7 828 aa8.58□□□□□ -1.04
MSH5-217ENST00000494458 ANKRD44Q8N8A2 993 aa8.58□□□□□ -1.04
MSH5-217ENST00000494458 ZNF579Q8NAF0 562 aaKnown RBP8.58□□□□□ -1.04
MSH5-217ENST00000494458 FMNL2Q96PY5 1086 aa8.58□□□□□ -1.04
MSH5-217ENST00000494458 PHAXQ9H814 394 aaKnown RBP8.58□□□□□ -1.04
MSH5-217ENST00000494458 CHPF2Q9P2E5 772 aa8.58□□□□□ -1.04
MSH5-217ENST00000494458 ADCY9O60503 1353 aa8.58□□□□□ -1.04
MSH5-217ENST00000494458 UTYO14607 1347 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 WNK3Q9BYP7 1800 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 BCL9O00512 1426 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 POTEMA6NI47 508 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 F6X3S4 739 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 EXOC5O00471 708 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 ONECUT3O60422 494 aaPredicted RBP8.57□□□□□ -1.04
MSH5-217ENST00000494458 PROSER3Q2NL68 480 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 GCC1Q96CN9 775 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 USP44Q9H0E7 712 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 DCTPP1Q9H773 170 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 USP16Q9Y5T5 823 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 TOGARAM1Q9Y4F4 1720 aa8.57□□□□□ -1.04
MSH5-217ENST00000494458 ALDH1L1O75891 902 aa8.56□□□□□ -1.04
MSH5-217ENST00000494458 ADAMTS2O95450 1211 aa8.56□□□□□ -1.04
MSH5-217ENST00000494458 NUCB1Q02818 461 aa8.56□□□□□ -1.04
MSH5-217ENST00000494458 FKBP5Q13451 457 aaPredicted RBP8.56□□□□□ -1.04
MSH5-217ENST00000494458 KSR2Q6VAB6 950 aa8.56□□□□□ -1.04
MSH5-217ENST00000494458 DNAAF4Q8WXU2 420 aa8.56□□□□□ -1.04
MSH5-217ENST00000494458 PIGBQ92521 554 aa8.56□□□□□ -1.04
MSH5-217ENST00000494458 MEIS3Q99687 375 aa8.56□□□□□ -1.04
MSH5-217ENST00000494458 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.55□□□□□ -1.04
MSH5-217ENST00000494458 GNAI3P08754 354 aa8.55□□□□□ -1.04
MSH5-217ENST00000494458 EIF2S2P20042 333 aaKnown RBP8.55□□□□□ -1.04
MSH5-217ENST00000494458 CEP85Q6P2H3 762 aa8.55□□□□□ -1.04
MSH5-217ENST00000494458 TTC5Q8N0Z6 440 aa8.55□□□□□ -1.04
MSH5-217ENST00000494458 MARCH10Q8NA82 808 aaPredicted RBP8.55□□□□□ -1.04
MSH5-217ENST00000494458 DDX54Q8TDD1 881 aaKnown RBP8.55□□□□□ -1.04
MSH5-217ENST00000494458 TEX13AQ9BXU3 409 aaPredicted RBP8.55□□□□□ -1.04
MSH5-217ENST00000494458 ATG3Q9NT62 314 aa8.55□□□□□ -1.04
MSH5-217ENST00000494458 PDZRN3Q9UPQ7 1066 aa8.55□□□□□ -1.04
MSH5-217ENST00000494458 C5P01031 1676 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 COL15A1P39059 1388 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 PI4KAP2A4QPH2 592 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 NBPF26B4DH59 902 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 ATP8B2P98198 1209 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 MTX1Q13505 466 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 NBPF14Q5TI25 921 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
MSH5-217ENST00000494458 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 PI4KAP1Q8N8J0 262 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 LINS1Q8NG48 757 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 BACH2Q9BYV9 841 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 SRCIN1Q9C0H9 1055 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 TMOD3Q9NYL9 352 aa8.54□□□□□ -1.04
MSH5-217ENST00000494458 GNAI2P04899 355 aa8.53□□□□□ -1.04
MSH5-217ENST00000494458 HSPA1LP34931 641 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms