RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
GPATCH4-207ENST00000494414 LOC102724428A0A0B4J2F2 783 aa11.17□□□□□ -0.62
GPATCH4-207ENST00000494414 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
GPATCH4-207ENST00000494414 SIK1P57059 783 aa11.17□□□□□ -0.62
GPATCH4-207ENST00000494414 ITPK1Q13572 414 aa11.17□□□□□ -0.62
GPATCH4-207ENST00000494414 C1orf141Q5JVX7 400 aa11.17□□□□□ -0.62
GPATCH4-207ENST00000494414 SYTL4Q96C24 671 aaPredicted RBP11.17□□□□□ -0.62
GPATCH4-207ENST00000494414 PHF12Q96QT6 1004 aa11.17□□□□□ -0.62
GPATCH4-207ENST00000494414 PDGFDQ9GZP0 370 aaPredicted RBP11.17□□□□□ -0.62
GPATCH4-207ENST00000494414 CCNL1Q9UK58 526 aaPredicted RBP11.17□□□□□ -0.62
GPATCH4-207ENST00000494414 NRXN2Q9P2S2 1712 aa11.17□□□□□ -0.62
GPATCH4-207ENST00000494414 CNTNAP4Q9C0A0 1308 aa11.16□□□□□ -0.62
GPATCH4-207ENST00000494414 IL17REQ8NFR9 667 aa11.16□□□□□ -0.62
GPATCH4-207ENST00000494414 LGR6Q9HBX8 967 aa11.16□□□□□ -0.62
GPATCH4-207ENST00000494414 STK32BQ9NY57 414 aa11.16□□□□□ -0.62
GPATCH4-207ENST00000494414 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
GPATCH4-207ENST00000494414 U2AF1L5P0DN76 240 aaPredicted RBP11.15□□□□□ -0.62
GPATCH4-207ENST00000494414 PTGER2P43116 358 aa11.15□□□□□ -0.62
GPATCH4-207ENST00000494414 U2AF1Q01081 240 aaKnown RBP eCLIP11.15□□□□□ -0.62
GPATCH4-207ENST00000494414 AMIGO3Q86WK7 504 aa11.15□□□□□ -0.62
GPATCH4-207ENST00000494414 ZNF579Q8NAF0 562 aaKnown RBP11.15□□□□□ -0.62
GPATCH4-207ENST00000494414 LINC00116Q8NCU8 138 aa11.15□□□□□ -0.62
GPATCH4-207ENST00000494414 BRCA1P38398 1863 aaKnown RBP11.15□□□□□ -0.63
GPATCH4-207ENST00000494414 GNAT3A8MTJ3 354 aa11.14□□□□□ -0.63
GPATCH4-207ENST00000494414 HMGB2P26583 209 aaKnown RBP11.14□□□□□ -0.63
GPATCH4-207ENST00000494414 CNGB1Q14028 1251 aaPredicted RBP11.14□□□□□ -0.63
GPATCH4-207ENST00000494414 KCNQ4P56696 695 aa11.13□□□□□ -0.63
GPATCH4-207ENST00000494414 NFATC2IPQ8NCF5 419 aa11.13□□□□□ -0.63
GPATCH4-207ENST00000494414 HEG1Q9ULI3 1381 aa11.13□□□□□ -0.63
GPATCH4-207ENST00000494414 CABP4P57796 275 aa11.12□□□□□ -0.63
GPATCH4-207ENST00000494414 RC3H1Q5TC82 1133 aaKnown RBP11.12□□□□□ -0.63
GPATCH4-207ENST00000494414 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
GPATCH4-207ENST00000494414 SLC16A10Q8TF71 515 aa11.12□□□□□ -0.63
GPATCH4-207ENST00000494414 DLEC1Q9Y238 1755 aa11.12□□□□□ -0.63
GPATCH4-207ENST00000494414 AFDNP55196 1824 aaKnown RBP11.12□□□□□ -0.63
GPATCH4-207ENST00000494414 SSFA2P28290 1259 aa11.11□□□□□ -0.63
GPATCH4-207ENST00000494414 NFE2L2Q16236 605 aa11.11□□□□□ -0.63
GPATCH4-207ENST00000494414 MTFR1LQ9H019 292 aa11.11□□□□□ -0.63
GPATCH4-207ENST00000494414 COL23A1Q86Y22 540 aaPredicted RBP11.1□□□□□ -0.63
GPATCH4-207ENST00000494414 PCDHB13Q9Y5F0 798 aa11.1□□□□□ -0.63
GPATCH4-207ENST00000494414 MAP3K13O43283 966 aa11.09□□□□□ -0.63
GPATCH4-207ENST00000494414 CHRM1P11229 460 aaPredicted RBP11.09□□□□□ -0.63
GPATCH4-207ENST00000494414 FLAD1Q8NFF5 587 aa11.09□□□□□ -0.63
GPATCH4-207ENST00000494414 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
GPATCH4-207ENST00000494414 SPON1Q9HCB6 807 aa11.09□□□□□ -0.63
GPATCH4-207ENST00000494414 ATP6V1AP38606 617 aa11.08□□□□□ -0.64
GPATCH4-207ENST00000494414 CCDC184Q52MB2 194 aa11.08□□□□□ -0.64
GPATCH4-207ENST00000494414 INTS5Q6P9B9 1019 aaKnown RBP11.08□□□□□ -0.64
GPATCH4-207ENST00000494414 ZNF790Q6PG37 636 aa11.08□□□□□ -0.64
GPATCH4-207ENST00000494414 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
GPATCH4-207ENST00000494414 ANKRD36CQ5JPF3 1778 aa11.08□□□□□ -0.64
GPATCH4-207ENST00000494414 SOS1Q07889 1333 aaPredicted RBP11.08□□□□□ -0.64
GPATCH4-207ENST00000494414 ANKRD31Q8N7Z5 1873 aa11.07□□□□□ -0.64
GPATCH4-207ENST00000494414 CYP19A1P11511 503 aaPredicted RBP11.07□□□□□ -0.64
GPATCH4-207ENST00000494414 SLC39A6Q13433 755 aa11.07□□□□□ -0.64
GPATCH4-207ENST00000494414 ZNF496Q96IT1 587 aaPredicted RBP11.07□□□□□ -0.64
GPATCH4-207ENST00000494414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 RPS6KA4O75676 772 aa11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 ZBTB7AO95365 584 aa11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 TEFQ10587 303 aa11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 ERICH6BQ5W0A0 696 aa11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 MCM10Q7L590 875 aa11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 RUNDC1Q96C34 613 aa11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 AK7Q96M32 723 aa11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 TFCP2L1Q9NZI6 479 aa11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 ADAMTS8Q9UP79 889 aa11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 C10orf71Q711Q0 1435 aa11.06□□□□□ -0.64
GPATCH4-207ENST00000494414 ARFGEF2Q9Y6D5 1785 aa11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 NUP98P52948 1817 aa11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 KCNQ3O43525 872 aa11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 CRKLP46109 303 aaKnown RBP11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 DCTN1Q14203 1278 aa11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 DNAJC10Q8IXB1 793 aa11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 PNISRQ8TF01 805 aaKnown RBP11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 MAPK8IP3Q9UPT6 1336 aa11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
GPATCH4-207ENST00000494414 COL15A1P39059 1388 aa11.04□□□□□ -0.64
GPATCH4-207ENST00000494414 COL11A2P13942 1736 aaPredicted RBP11.04□□□□□ -0.64
GPATCH4-207ENST00000494414 RGL2O15211 777 aa11.04□□□□□ -0.64
GPATCH4-207ENST00000494414 GNPATO15228 680 aa11.04□□□□□ -0.64
GPATCH4-207ENST00000494414 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
GPATCH4-207ENST00000494414 CLCN6P51797 869 aa11.04□□□□□ -0.64
GPATCH4-207ENST00000494414 USP42Q9H9J4 1324 aaKnown RBP11.04□□□□□ -0.64
GPATCH4-207ENST00000494414 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
GPATCH4-207ENST00000494414 MS4A3Q96HJ5 214 aa11.03□□□□□ -0.64
GPATCH4-207ENST00000494414 FMNL2Q96PY5 1086 aa11.03□□□□□ -0.64
GPATCH4-207ENST00000494414 CCDC87Q9NVE4 849 aa11.03□□□□□ -0.64
GPATCH4-207ENST00000494414 PCDHB8Q9UN66 801 aa11.03□□□□□ -0.64
GPATCH4-207ENST00000494414 ZBTB1Q9Y2K1 713 aa11.03□□□□□ -0.64
GPATCH4-207ENST00000494414 CHD4Q14839 1912 aa11.03□□□□□ -0.64
GPATCH4-207ENST00000494414 N4BP2Q86UW6 1770 aaPredicted RBP11.03□□□□□ -0.64
GPATCH4-207ENST00000494414 BTBD11A6QL63 1104 aa11.02□□□□□ -0.65
GPATCH4-207ENST00000494414 EIF5P55010 431 aaKnown RBP11.02□□□□□ -0.65
GPATCH4-207ENST00000494414 LMOD3Q0VAK6 560 aa11.02□□□□□ -0.65
GPATCH4-207ENST00000494414 WDR43Q15061 677 aaKnown RBP eCLIP11.02□□□□□ -0.65
GPATCH4-207ENST00000494414 TAF7Q15545 349 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms