RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 PGBD3Q8N328 593 aa5.83□□□□□ -1.48
PTPN12-212ENST00000494248 XAGE2Q96GT9 111 aa5.83□□□□□ -1.48
PTPN12-212ENST00000494248 PCDHB11Q9Y5F2 797 aa5.83□□□□□ -1.48
PTPN12-212ENST00000494248 STAU1O95793 577 aaKnown RBP5.82□□□□□ -1.48
PTPN12-212ENST00000494248 GNRH1P01148 92 aa5.82□□□□□ -1.48
PTPN12-212ENST00000494248 CD33P20138 364 aa5.82□□□□□ -1.48
PTPN12-212ENST00000494248 SKIV2LQ15477 1246 aaKnown RBP5.82□□□□□ -1.48
PTPN12-212ENST00000494248 ZBBXA8MT70 800 aa5.81□□□□□ -1.48
PTPN12-212ENST00000494248 ADH6P28332 368 aa5.81□□□□□ -1.48
PTPN12-212ENST00000494248 PCBP4P57723 403 aaKnown RBP5.81□□□□□ -1.48
PTPN12-212ENST00000494248 TRIM52Q96A61 297 aa5.81□□□□□ -1.48
PTPN12-212ENST00000494248 PCDHGC4Q9Y5F7 938 aa5.81□□□□□ -1.48
PTPN12-212ENST00000494248 ATP4AP20648 1035 aa5.8□□□□□ -1.48
PTPN12-212ENST00000494248 TMEM214Q6NUQ4 689 aaKnown RBP5.8□□□□□ -1.48
PTPN12-212ENST00000494248 PNMA1Q8ND90 353 aa5.8□□□□□ -1.48
PTPN12-212ENST00000494248 MDFIQ99750 246 aa5.8□□□□□ -1.48
PTPN12-212ENST00000494248 CDCA7Q9BWT1 371 aaPredicted RBP5.8□□□□□ -1.48
PTPN12-212ENST00000494248 DCDC2BA2VCK2 349 aa5.79□□□□□ -1.48
PTPN12-212ENST00000494248 H2AFB1P0C5Y9 115 aa5.79□□□□□ -1.48
PTPN12-212ENST00000494248 H2AFB2P0C5Z0 115 aa5.79□□□□□ -1.48
PTPN12-212ENST00000494248 MAPTP10636 758 aaKnown RBP5.79□□□□□ -1.48
PTPN12-212ENST00000494248 TNP2Q05952 138 aa5.79□□□□□ -1.48
PTPN12-212ENST00000494248 GNASQ5JWF2 1037 aa5.79□□□□□ -1.48
PTPN12-212ENST00000494248 RNF20Q5VTR2 975 aa5.79□□□□□ -1.48
PTPN12-212ENST00000494248 CCDC125Q86Z20 511 aa5.79□□□□□ -1.48
PTPN12-212ENST00000494248 GRIK4Q16099 956 aa5.78□□□□□ -1.48
PTPN12-212ENST00000494248 FAM182BQ5T319 152 aa5.78□□□□□ -1.48
PTPN12-212ENST00000494248 STRN4Q9NRL3 753 aa5.78□□□□□ -1.48
PTPN12-212ENST00000494248 ATXN7O15265 892 aaPredicted RBP5.77□□□□□ -1.49
PTPN12-212ENST00000494248 SH3D19Q5HYK7 790 aa5.77□□□□□ -1.49
PTPN12-212ENST00000494248 ZNF468Q5VIY5 522 aaPredicted RBP5.77□□□□□ -1.49
PTPN12-212ENST00000494248 C8orf86Q6ZUL3 223 aa5.77□□□□□ -1.49
PTPN12-212ENST00000494248 PPARGC1BQ86YN6 1023 aaKnown RBP5.77□□□□□ -1.49
PTPN12-212ENST00000494248 AVENQ9NQS1 362 aaPredicted RBP5.77□□□□□ -1.49
PTPN12-212ENST00000494248 APBA3O96018 575 aa5.76□□□□□ -1.49
PTPN12-212ENST00000494248 FIGNL1Q6PIW4 674 aa5.76□□□□□ -1.49
PTPN12-212ENST00000494248 VSIG10Q8N0Z9 540 aa5.76□□□□□ -1.49
PTPN12-212ENST00000494248 RHBDD1Q8TEB9 315 aa5.76□□□□□ -1.49
PTPN12-212ENST00000494248 CCDC85AQ96PX6 553 aaPredicted RBP5.76□□□□□ -1.49
PTPN12-212ENST00000494248 STARD13Q9Y3M8 1113 aa5.76□□□□□ -1.49
PTPN12-212ENST00000494248 PLA2G4AP47712 749 aa5.75□□□□□ -1.49
PTPN12-212ENST00000494248 FBLN7Q53RD9 439 aa5.75□□□□□ -1.49
PTPN12-212ENST00000494248 PRRT3Q5FWE3 981 aa5.75□□□□□ -1.49
PTPN12-212ENST00000494248 NLRP8Q86W28 1048 aa5.75□□□□□ -1.49
PTPN12-212ENST00000494248 GJD4Q96KN9 370 aaPredicted RBP5.75□□□□□ -1.49
PTPN12-212ENST00000494248 ETNK1Q9HBU6 452 aa5.75□□□□□ -1.49
PTPN12-212ENST00000494248 SLC24A3Q9HC58 644 aa5.75□□□□□ -1.49
PTPN12-212ENST00000494248 KHNYNO15037 678 aaKnown RBP5.74□□□□□ -1.49
PTPN12-212ENST00000494248 TSGA10IPQ3SY00 556 aa5.74□□□□□ -1.49
PTPN12-212ENST00000494248 RNF112Q9ULX5 631 aa5.74□□□□□ -1.49
PTPN12-212ENST00000494248 ELOA3CA0A087WX78 387 aaPredicted RBP5.73□□□□□ -1.49
PTPN12-212ENST00000494248 A0A1W2PNR3 127 aa5.73□□□□□ -1.49
PTPN12-212ENST00000494248 ELOA3DA6NLF2 546 aaPredicted RBP5.73□□□□□ -1.49
PTPN12-212ENST00000494248 GPR37L1O60883 481 aa5.73□□□□□ -1.49
PTPN12-212ENST00000494248 SELPP16109 830 aa5.73□□□□□ -1.49
PTPN12-212ENST00000494248 RFC5P40937 340 aa5.73□□□□□ -1.49
PTPN12-212ENST00000494248 KRTAP1-1Q07627 177 aa5.73□□□□□ -1.49
PTPN12-212ENST00000494248 ELOA3BQ3SY89 546 aa5.73□□□□□ -1.49
PTPN12-212ENST00000494248 TBC1D9Q6ZT07 1266 aa5.73□□□□□ -1.49
PTPN12-212ENST00000494248 ELOA3Q8NG57 546 aa5.73□□□□□ -1.49
PTPN12-212ENST00000494248 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
PTPN12-212ENST00000494248 M0R082 166 aa5.72□□□□□ -1.49
PTPN12-212ENST00000494248 NID1P14543 1247 aa5.72□□□□□ -1.49
PTPN12-212ENST00000494248 GTF2E1P29083 439 aaPredicted RBP5.72□□□□□ -1.49
PTPN12-212ENST00000494248 ADGRE1Q14246 886 aa5.72□□□□□ -1.49
PTPN12-212ENST00000494248 MBTPS1Q14703 1052 aa5.72□□□□□ -1.49
PTPN12-212ENST00000494248 TLR1Q15399 786 aa5.72□□□□□ -1.49
PTPN12-212ENST00000494248 ZNF295-AS1Q8N0V1 137 aa5.72□□□□□ -1.49
PTPN12-212ENST00000494248 ZNF417Q8TAU3 575 aa5.72□□□□□ -1.49
PTPN12-212ENST00000494248 ZNF587Q96SQ5 575 aaPredicted RBP5.72□□□□□ -1.49
PTPN12-212ENST00000494248 ESF1Q9H501 851 aaKnown RBP5.72□□□□□ -1.49
PTPN12-212ENST00000494248 SPDYE3A6NKU9 549 aa5.71□□□□□ -1.5
PTPN12-212ENST00000494248 ALBP02768 609 aa5.71□□□□□ -1.5
PTPN12-212ENST00000494248 NR1H3Q13133 447 aa5.71□□□□□ -1.5
PTPN12-212ENST00000494248 FAM117AQ9C073 453 aa5.71□□□□□ -1.5
PTPN12-212ENST00000494248 PCMTD2Q9NV79 361 aa5.71□□□□□ -1.5
PTPN12-212ENST00000494248 PRR12Q9ULL5 1215 aa5.71□□□□□ -1.5
PTPN12-212ENST00000494248 ATP1B4Q9UN42 357 aaPredicted RBP5.71□□□□□ -1.5
PTPN12-212ENST00000494248 EFSO43281 561 aa5.7□□□□□ -1.5
PTPN12-212ENST00000494248 FAM157BP0CG42 384 aa5.7□□□□□ -1.5
PTPN12-212ENST00000494248 TRIM28Q13263 835 aaKnown RBP5.7□□□□□ -1.5
PTPN12-212ENST00000494248 SYT9Q86SS6 491 aa5.7□□□□□ -1.5
PTPN12-212ENST00000494248 MICALL1Q8N3F8 863 aa5.7□□□□□ -1.5
PTPN12-212ENST00000494248 AIDAQ96BJ3 306 aa5.7□□□□□ -1.5
PTPN12-212ENST00000494248 ZIC5Q96T25 663 aa5.7□□□□□ -1.5
PTPN12-212ENST00000494248 PRDM6Q9NQX0 595 aa5.7□□□□□ -1.5
PTPN12-212ENST00000494248 ESCO1Q5FWF5 840 aa5.69□□□□□ -1.5
PTPN12-212ENST00000494248 SHISA2Q6UWI4 295 aa5.69□□□□□ -1.5
PTPN12-212ENST00000494248 C1orf216Q8TAB5 229 aa5.69□□□□□ -1.5
PTPN12-212ENST00000494248 NACC1Q96RE7 527 aa5.69□□□□□ -1.5
PTPN12-212ENST00000494248 SSBP4Q9BWG4 385 aaPredicted RBP5.69□□□□□ -1.5
PTPN12-212ENST00000494248 ADARB2-AS1A8MUL3 147 aa5.68□□□□□ -1.5
PTPN12-212ENST00000494248 MYCP01106 439 aaPredicted RBP5.68□□□□□ -1.5
PTPN12-212ENST00000494248 ALAS2P22557 587 aa5.68□□□□□ -1.5
PTPN12-212ENST00000494248 SCNN1DP51172 638 aa5.68□□□□□ -1.5
PTPN12-212ENST00000494248 MCCD1P59942 119 aaPredicted RBP5.68□□□□□ -1.5
PTPN12-212ENST00000494248 ARSJQ5FYB0 599 aaPredicted RBP5.68□□□□□ -1.5
PTPN12-212ENST00000494248 C20orf204Q6ZNR8 217 aa5.68□□□□□ -1.5
PTPN12-212ENST00000494248 MARK1Q9P0L2 795 aa5.68□□□□□ -1.5
PTPN12-212ENST00000494248 USP3Q9Y6I4 520 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms