RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 PTPRCP08575 1304 aa11.27□□□□□ -0.61
MINDY4-203ENST00000494187 ZNF853P0CG23 659 aa11.27□□□□□ -0.61
MINDY4-203ENST00000494187 HSP90AB3PQ58FF7 597 aa11.27□□□□□ -0.61
MINDY4-203ENST00000494187 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.61
MINDY4-203ENST00000494187 PRPF40BQ6NWY9 871 aaKnown RBP11.27□□□□□ -0.61
MINDY4-203ENST00000494187 TNPO1Q92973 898 aaKnown RBP11.27□□□□□ -0.61
MINDY4-203ENST00000494187 NAP1L5Q96NT1 182 aaPredicted RBP11.27□□□□□ -0.61
MINDY4-203ENST00000494187 MYO5BQ9ULV0 1848 aa11.26□□□□□ -0.61
MINDY4-203ENST00000494187 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
MINDY4-203ENST00000494187 GOLGA6L4A6NEF3 574 aa11.26□□□□□ -0.61
MINDY4-203ENST00000494187 LRRC2Q9BYS8 371 aa11.26□□□□□ -0.61
MINDY4-203ENST00000494187 KCNQ4P56696 695 aa11.26□□□□□ -0.61
MINDY4-203ENST00000494187 AKAP4Q5JQC9 854 aa11.26□□□□□ -0.61
MINDY4-203ENST00000494187 CNTROBQ8N137 903 aa11.26□□□□□ -0.61
MINDY4-203ENST00000494187 PLEKHG1Q9ULL1 1385 aa11.25□□□□□ -0.61
MINDY4-203ENST00000494187 FIBPO43427 364 aa11.25□□□□□ -0.61
MINDY4-203ENST00000494187 CADPS2Q86UW7 1296 aa11.25□□□□□ -0.61
MINDY4-203ENST00000494187 PANK2Q9BZ23 570 aa11.25□□□□□ -0.61
MINDY4-203ENST00000494187 PTPRUQ92729 1446 aa11.25□□□□□ -0.61
MINDY4-203ENST00000494187 NLRP1Q9C000 1473 aa11.25□□□□□ -0.61
MINDY4-203ENST00000494187 EIF4A1P60842 406 aaKnown RBP11.25□□□□□ -0.61
MINDY4-203ENST00000494187 AMOTQ4VCS5 1084 aa11.25□□□□□ -0.61
MINDY4-203ENST00000494187 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
MINDY4-203ENST00000494187 IFNL2Q8IZJ0 200 aa11.25□□□□□ -0.61
MINDY4-203ENST00000494187 JAKMIP1Q96N16 626 aaKnown RBP11.25□□□□□ -0.61
MINDY4-203ENST00000494187 PKP1Q13835 747 aa11.25□□□□□ -0.61
MINDY4-203ENST00000494187 ANKRD13DQ6ZTN6 518 aa11.25□□□□□ -0.61
MINDY4-203ENST00000494187 LMTK2Q8IWU2 1503 aa11.24□□□□□ -0.61
MINDY4-203ENST00000494187 LRRC7Q96NW7 1537 aa11.24□□□□□ -0.61
MINDY4-203ENST00000494187 VWDEQ8N2E2 1590 aa11.24□□□□□ -0.61
MINDY4-203ENST00000494187 FAM135BQ49AJ0 1406 aa11.24□□□□□ -0.61
MINDY4-203ENST00000494187 CASTP20810 708 aaKnown RBP11.24□□□□□ -0.61
MINDY4-203ENST00000494187 ZNF594Q96JF6 807 aaPredicted RBP11.24□□□□□ -0.61
MINDY4-203ENST00000494187 BICC1Q9H694 974 aaKnown RBP11.24□□□□□ -0.61
MINDY4-203ENST00000494187 A0A0U1RQG5 324 aaPredicted RBP11.24□□□□□ -0.61
MINDY4-203ENST00000494187 ATP8B2P98198 1209 aa11.24□□□□□ -0.61
MINDY4-203ENST00000494187 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
MINDY4-203ENST00000494187 TBC1D2BQ9UPU7 963 aa11.24□□□□□ -0.61
MINDY4-203ENST00000494187 SIGLEC1Q9BZZ2 1709 aa11.24□□□□□ -0.61
MINDY4-203ENST00000494187 ABCC4O15439 1325 aa11.24□□□□□ -0.61
MINDY4-203ENST00000494187 FAM182BQ5T319 152 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 ZNF790Q6PG37 636 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 FAM43AQ8N2R8 423 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 TMEM94Q12767 1356 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 CD163L1Q9NR16 1453 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 ZKSCAN1P17029 563 aaPredicted RBP11.23□□□□□ -0.61
MINDY4-203ENST00000494187 LMBR1LQ6UX01 489 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 CCDC24Q8N4L8 307 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 DDX11Q96FC9 970 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 IQSEC3Q9UPP2 1182 aaPredicted RBP11.23□□□□□ -0.61
MINDY4-203ENST00000494187 MTMR7Q9Y216 660 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 SOS1Q07889 1333 aaPredicted RBP11.23□□□□□ -0.61
MINDY4-203ENST00000494187 RABEP1Q15276 862 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 NECAB1Q8N987 351 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 HELBQ8NG08 1087 aaPredicted RBP11.23□□□□□ -0.61
MINDY4-203ENST00000494187 RBM27Q9P2N5 1060 aaKnown RBP11.23□□□□□ -0.61
MINDY4-203ENST00000494187 ADAMTS13Q76LX8 1427 aa11.23□□□□□ -0.61
MINDY4-203ENST00000494187 ZNF335Q9H4Z2 1342 aaPredicted RBP11.23□□□□□ -0.61
MINDY4-203ENST00000494187 RTL1A6NKG5 1358 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 TIMM10P62072 90 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 CCDC83Q8IWF9 413 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 BTG4Q9NY30 223 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 PALD1Q9ULE6 856 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 MYO3AQ8NEV4 1616 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 PIK3R4Q99570 1358 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 RRP9O43818 475 aaKnown RBP11.22□□□□□ -0.61
MINDY4-203ENST00000494187 TMOD3Q9NYL9 352 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 SMC3Q9UQE7 1217 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 NRXN1Q9ULB1 1477 aa11.22□□□□□ -0.61
MINDY4-203ENST00000494187 GRM8O00222 908 aa11.21□□□□□ -0.61
MINDY4-203ENST00000494187 DNTTIP2Q5QJE6 756 aaKnown RBP11.21□□□□□ -0.61
MINDY4-203ENST00000494187 ARHGEF25Q86VW2 580 aa11.21□□□□□ -0.61
MINDY4-203ENST00000494187 ZCRB1Q8TBF4 217 aaKnown RBP11.21□□□□□ -0.61
MINDY4-203ENST00000494187 FMNL2Q96PY5 1086 aa11.21□□□□□ -0.61
MINDY4-203ENST00000494187 DEPDC5O75140 1603 aa11.21□□□□□ -0.61
MINDY4-203ENST00000494187 PNPLA6Q8IY17 1366 aa11.21□□□□□ -0.61
MINDY4-203ENST00000494187 DDX11L8A8MPP1 907 aa11.21□□□□□ -0.62
MINDY4-203ENST00000494187 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.62
MINDY4-203ENST00000494187 LARP1Q6PKG0 1096 aaKnown RBP11.21□□□□□ -0.62
MINDY4-203ENST00000494187 CHST3Q7LGC8 479 aa11.21□□□□□ -0.62
MINDY4-203ENST00000494187 FAM89AQ96GI7 184 aa11.21□□□□□ -0.62
MINDY4-203ENST00000494187 SUCLG2Q96I99 432 aa11.21□□□□□ -0.62
MINDY4-203ENST00000494187 CHMP4AQ9BY43 222 aa11.21□□□□□ -0.62
MINDY4-203ENST00000494187 HAND2P61296 217 aa11.21□□□□□ -0.62
MINDY4-203ENST00000494187 KSR2Q6VAB6 950 aa11.21□□□□□ -0.62
MINDY4-203ENST00000494187 NPHP3Q7Z494 1330 aa11.21□□□□□ -0.62
MINDY4-203ENST00000494187 ATP7BP35670 1465 aa11.2□□□□□ -0.62
MINDY4-203ENST00000494187 GIGYF1O75420 1035 aaPredicted RBP11.2□□□□□ -0.62
MINDY4-203ENST00000494187 SLC4A8Q2Y0W8 1093 aa11.2□□□□□ -0.62
MINDY4-203ENST00000494187 SLFNL1Q499Z3 407 aa11.2□□□□□ -0.62
MINDY4-203ENST00000494187 HSP90AB4PQ58FF6 505 aa11.2□□□□□ -0.62
MINDY4-203ENST00000494187 CNNM1Q9NRU3 951 aa11.2□□□□□ -0.62
MINDY4-203ENST00000494187 GOLIM4O00461 696 aa11.2□□□□□ -0.62
MINDY4-203ENST00000494187 L1TD1Q5T7N2 865 aaKnown RBP11.2□□□□□ -0.62
MINDY4-203ENST00000494187 CCDC129Q6ZRS4 1044 aa11.2□□□□□ -0.62
MINDY4-203ENST00000494187 TTLL7Q6ZT98 887 aa11.2□□□□□ -0.62
MINDY4-203ENST00000494187 RUFY2Q8WXA3 655 aa11.2□□□□□ -0.62
MINDY4-203ENST00000494187 ISY1Q9ULR0 285 aaKnown RBP11.2□□□□□ -0.62
MINDY4-203ENST00000494187 PREX1Q8TCU6 1659 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms