RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 TJP1Q07157 1748 aa14.58□□□□□ -0.08
MCF2L-231ENST00000494043 LOC102724428A0A0B4J2F2 783 aa14.57□□□□□ -0.08
MCF2L-231ENST00000494043 IPO8O15397 1037 aaKnown RBP14.57□□□□□ -0.08
MCF2L-231ENST00000494043 SIK1P57059 783 aa14.57□□□□□ -0.08
MCF2L-231ENST00000494043 DNAJC10Q8IXB1 793 aa14.57□□□□□ -0.08
MCF2L-231ENST00000494043 DBF4Q9UBU7 674 aaPredicted RBP14.57□□□□□ -0.08
MCF2L-231ENST00000494043 USP16Q9Y5T5 823 aa14.57□□□□□ -0.08
MCF2L-231ENST00000494043 ZNF831Q5JPB2 1677 aa14.57□□□□□ -0.08
MCF2L-231ENST00000494043 ERBB4Q15303 1308 aa14.57□□□□□ -0.08
MCF2L-231ENST00000494043 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
MCF2L-231ENST00000494043 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
MCF2L-231ENST00000494043 ATF7IPQ6VMQ6 1270 aa14.56□□□□□ -0.08
MCF2L-231ENST00000494043 ARHGAP45Q92619 1136 aa14.56□□□□□ -0.08
MCF2L-231ENST00000494043 DDX21Q9NR30 783 aaKnown RBP eCLIP14.56□□□□□ -0.08
MCF2L-231ENST00000494043 PTPRCP08575 1304 aa14.56□□□□□ -0.08
MCF2L-231ENST00000494043 CACNA1FO60840 1977 aa14.55□□□□□ -0.08
MCF2L-231ENST00000494043 TRIM37O94972 964 aa14.55□□□□□ -0.08
MCF2L-231ENST00000494043 TRIM27P14373 513 aa14.55□□□□□ -0.08
MCF2L-231ENST00000494043 FLIIQ13045 1269 aa14.55□□□□□ -0.08
MCF2L-231ENST00000494043 PDE3AQ14432 1141 aa14.55□□□□□ -0.08
MCF2L-231ENST00000494043 PDIA6Q15084 440 aa14.55□□□□□ -0.08
MCF2L-231ENST00000494043 PROSER3Q2NL68 480 aa14.55□□□□□ -0.08
MCF2L-231ENST00000494043 G2E3Q7L622 706 aa14.55□□□□□ -0.08
MCF2L-231ENST00000494043 STARD3NLO95772 234 aa14.54□□□□□ -0.08
MCF2L-231ENST00000494043 ANXA1P04083 346 aa14.54□□□□□ -0.08
MCF2L-231ENST00000494043 MS4A1P11836 297 aa14.54□□□□□ -0.08
MCF2L-231ENST00000494043 ATP6V1AP38606 617 aa14.54□□□□□ -0.08
MCF2L-231ENST00000494043 API5Q9BZZ5 524 aaKnown RBP14.54□□□□□ -0.08
MCF2L-231ENST00000494043 HYPKQ9NX55 129 aa14.54□□□□□ -0.08
MCF2L-231ENST00000494043 TNNQ9UQP3 1299 aa14.54□□□□□ -0.08
MCF2L-231ENST00000494043 LY75O60449 1722 aa14.54□□□□□ -0.08
MCF2L-231ENST00000494043 CYP19A1P11511 503 aaPredicted RBP14.53□□□□□ -0.08
MCF2L-231ENST00000494043 ITPK1Q13572 414 aa14.53□□□□□ -0.08
MCF2L-231ENST00000494043 FKBP8Q14318 412 aa14.53□□□□□ -0.08
MCF2L-231ENST00000494043 DZIP1LQ8IYY4 767 aaKnown RBP14.53□□□□□ -0.08
MCF2L-231ENST00000494043 ABCC4O15439 1325 aa14.52□□□□□ -0.08
MCF2L-231ENST00000494043 NBPF26B4DH59 902 aa14.52□□□□□ -0.09
MCF2L-231ENST00000494043 A1BGP04217 495 aa14.52□□□□□ -0.09
MCF2L-231ENST00000494043 RLBP1P12271 317 aa14.52□□□□□ -0.09
MCF2L-231ENST00000494043 FKBP5Q13451 457 aaPredicted RBP14.52□□□□□ -0.09
MCF2L-231ENST00000494043 NBPF14Q5TI25 921 aa14.52□□□□□ -0.09
MCF2L-231ENST00000494043 NBPF10Q6P3W6 841 aaKnown RBP14.52□□□□□ -0.09
MCF2L-231ENST00000494043 LRP10Q7Z4F1 713 aa14.52□□□□□ -0.09
MCF2L-231ENST00000494043 FTSJ3Q8IY81 847 aaKnown RBP14.52□□□□□ -0.09
MCF2L-231ENST00000494043 NBPF15Q8N660 670 aa14.52□□□□□ -0.09
MCF2L-231ENST00000494043 PANK1Q8TE04 598 aa14.52□□□□□ -0.09
MCF2L-231ENST00000494043 CLUAP1Q96AJ1 413 aa14.52□□□□□ -0.09
MCF2L-231ENST00000494043 PHAXQ9H814 394 aaKnown RBP14.52□□□□□ -0.09
MCF2L-231ENST00000494043 COL5A3P25940 1745 aaPredicted RBP14.52□□□□□ -0.09
MCF2L-231ENST00000494043 RREB1Q92766 1687 aa14.52□□□□□ -0.09
MCF2L-231ENST00000494043 MYL6BP14649 208 aa14.51□□□□□ -0.09
MCF2L-231ENST00000494043 PIP4K2AP48426 406 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-231ENST00000494043 GTF3C3Q9Y5Q9 886 aa14.51□□□□□ -0.09
MCF2L-231ENST00000494043 TNS1Q9HBL0 1735 aaKnown RBP14.51□□□□□ -0.09
MCF2L-231ENST00000494043 CRBNQ96SW2 442 aa14.5□□□□□ -0.09
MCF2L-231ENST00000494043 CCNL1Q9UK58 526 aaPredicted RBP14.5□□□□□ -0.09
MCF2L-231ENST00000494043 PXDNLA1KZ92 1463 aa14.5□□□□□ -0.09
MCF2L-231ENST00000494043 CRKLP46109 303 aaKnown RBP14.49□□□□□ -0.09
MCF2L-231ENST00000494043 LINC00116Q8NCU8 138 aa14.49□□□□□ -0.09
MCF2L-231ENST00000494043 XAGE3Q8WTP9 111 aa14.49□□□□□ -0.09
MCF2L-231ENST00000494043 CCDC87Q9NVE4 849 aa14.49□□□□□ -0.09
MCF2L-231ENST00000494043 ADCY9O60503 1353 aa14.48□□□□□ -0.09
MCF2L-231ENST00000494043 DDX58O95786 925 aaKnown RBP14.48□□□□□ -0.09
MCF2L-231ENST00000494043 KCNQ4P56696 695 aa14.48□□□□□ -0.09
MCF2L-231ENST00000494043 ERICH6BQ5W0A0 696 aa14.48□□□□□ -0.09
MCF2L-231ENST00000494043 INTS5Q6P9B9 1019 aaKnown RBP14.48□□□□□ -0.09
MCF2L-231ENST00000494043 COPS6Q7L5N1 327 aa14.48□□□□□ -0.09
MCF2L-231ENST00000494043 TMEM57Q8N5G2 664 aa14.48□□□□□ -0.09
MCF2L-231ENST00000494043 EXOC6Q8TAG9 804 aa14.48□□□□□ -0.09
MCF2L-231ENST00000494043 ZBTB1Q9Y2K1 713 aa14.48□□□□□ -0.09
MCF2L-231ENST00000494043 COG6Q9Y2V7 657 aa14.48□□□□□ -0.09
MCF2L-231ENST00000494043 CNTNAP4Q9C0A0 1308 aa14.47□□□□□ -0.09
MCF2L-231ENST00000494043 F6X3S4 739 aa14.47□□□□□ -0.09
MCF2L-231ENST00000494043 APBA3O96018 575 aa14.47□□□□□ -0.09
MCF2L-231ENST00000494043 AIMP1Q12904 312 aaKnown RBP14.47□□□□□ -0.09
MCF2L-231ENST00000494043 MVPQ14764 893 aaKnown RBP14.47□□□□□ -0.09
MCF2L-231ENST00000494043 SLC27A3Q5K4L6 730 aa14.47□□□□□ -0.09
MCF2L-231ENST00000494043 RGPD3A6NKT7 1758 aaPredicted RBP14.47□□□□□ -0.09
MCF2L-231ENST00000494043 RGPD4Q7Z3J3 1758 aa14.47□□□□□ -0.09
MCF2L-231ENST00000494043 PI4KAP2A4QPH2 592 aa14.46□□□□□ -0.09
MCF2L-231ENST00000494043 PLSCR1O15162 318 aa14.46□□□□□ -0.09
MCF2L-231ENST00000494043 IL6STP40189 918 aaPredicted RBP14.46□□□□□ -0.09
MCF2L-231ENST00000494043 RC3H1Q5TC82 1133 aaKnown RBP14.46□□□□□ -0.09
MCF2L-231ENST00000494043 INTS3Q68E01 1043 aaKnown RBP14.46□□□□□ -0.09
MCF2L-231ENST00000494043 KSR2Q6VAB6 950 aa14.46□□□□□ -0.09
MCF2L-231ENST00000494043 ITPRIPQ8IWB1 547 aa14.46□□□□□ -0.09
MCF2L-231ENST00000494043 PI4KAP1Q8N8J0 262 aa14.46□□□□□ -0.09
MCF2L-231ENST00000494043 N4BP2Q86UW6 1770 aaPredicted RBP14.46□□□□□ -0.09
MCF2L-231ENST00000494043 TAF1LQ8IZX4 1826 aa14.45□□□□□ -0.1
MCF2L-231ENST00000494043 C4BP0C0L5 1744 aa14.45□□□□□ -0.1
MCF2L-231ENST00000494043 CCT4P50991 539 aaKnown RBP14.45□□□□□ -0.1
MCF2L-231ENST00000494043 TTLL7Q6ZT98 887 aa14.45□□□□□ -0.1
MCF2L-231ENST00000494043 DNAAF4Q8WXU2 420 aa14.45□□□□□ -0.1
MCF2L-231ENST00000494043 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
MCF2L-231ENST00000494043 ATP10DQ9P241 1426 aa14.45□□□□□ -0.1
MCF2L-231ENST00000494043 MAP3K2Q9Y2U5 619 aa14.45□□□□□ -0.1
MCF2L-231ENST00000494043 MYH14Q7Z406 1995 aaKnown RBP14.45□□□□□ -0.1
MCF2L-231ENST00000494043 EIF5P55010 431 aaKnown RBP14.44□□□□□ -0.1
MCF2L-231ENST00000494043 TXNRD1Q16881 649 aa14.44□□□□□ -0.1
MCF2L-231ENST00000494043 SLC4A10Q6U841 1118 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms