RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 TM4SF1P30408 202 aa13.69□□□□□ -0.22
NR1H3-225ENST00000494018 LDHDQ86WU2 507 aa13.69□□□□□ -0.22
NR1H3-225ENST00000494018 GGNBP2Q9H3C7 697 aa13.69□□□□□ -0.22
NR1H3-225ENST00000494018 SPG7Q9UQ90 795 aa13.69□□□□□ -0.22
NR1H3-225ENST00000494018 DLEC1Q9Y238 1755 aa13.68□□□□□ -0.22
NR1H3-225ENST00000494018 RASSF10A6NK89 507 aa13.68□□□□□ -0.22
NR1H3-225ENST00000494018 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
NR1H3-225ENST00000494018 CRKLP46109 303 aaKnown RBP13.68□□□□□ -0.22
NR1H3-225ENST00000494018 SOX10P56693 466 aa13.68□□□□□ -0.22
NR1H3-225ENST00000494018 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
NR1H3-225ENST00000494018 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
NR1H3-225ENST00000494018 L3MBTL2Q969R5 705 aa13.68□□□□□ -0.22
NR1H3-225ENST00000494018 TAF1DQ9H5J8 278 aaPredicted RBP13.68□□□□□ -0.22
NR1H3-225ENST00000494018 RTL1A6NKG5 1358 aa13.68□□□□□ -0.22
NR1H3-225ENST00000494018 MAP1SQ66K74 1059 aaPredicted RBP13.67□□□□□ -0.22
NR1H3-225ENST00000494018 ZNF622Q969S3 477 aaKnown RBP eCLIP13.67□□□□□ -0.22
NR1H3-225ENST00000494018 BEGAINQ9BUH8 593 aa13.67□□□□□ -0.22
NR1H3-225ENST00000494018 CACNA1SQ13698 1873 aa13.66□□□□□ -0.22
NR1H3-225ENST00000494018 PHKG2P15735 406 aa13.66□□□□□ -0.22
NR1H3-225ENST00000494018 DGKZQ13574 1117 aa13.66□□□□□ -0.22
NR1H3-225ENST00000494018 CYP4F22Q6NT55 531 aa13.66□□□□□ -0.22
NR1H3-225ENST00000494018 CCDC24Q8N4L8 307 aa13.66□□□□□ -0.22
NR1H3-225ENST00000494018 FER1L6Q2WGJ9 1857 aa13.65□□□□□ -0.22
NR1H3-225ENST00000494018 AOC2O75106 756 aa13.65□□□□□ -0.22
NR1H3-225ENST00000494018 CAPNS2Q96L46 248 aa13.65□□□□□ -0.22
NR1H3-225ENST00000494018 INSRP06213 1382 aa13.65□□□□□ -0.22
NR1H3-225ENST00000494018 CARMIL3Q8ND23 1372 aa13.65□□□□□ -0.22
NR1H3-225ENST00000494018 H0YIN7 160 aa13.64□□□□□ -0.23
NR1H3-225ENST00000494018 PPM1GO15355 546 aaPredicted RBP13.64□□□□□ -0.23
NR1H3-225ENST00000494018 NFIXQ14938 502 aa13.64□□□□□ -0.23
NR1H3-225ENST00000494018 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
NR1H3-225ENST00000494018 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
NR1H3-225ENST00000494018 GPR101Q96P66 508 aaPredicted RBP13.64□□□□□ -0.23
NR1H3-225ENST00000494018 ZPR1O75312 459 aa13.63□□□□□ -0.23
NR1H3-225ENST00000494018 SERPINB2P05120 415 aa13.63□□□□□ -0.23
NR1H3-225ENST00000494018 EMILIN1Q9Y6C2 1016 aa13.63□□□□□ -0.23
NR1H3-225ENST00000494018 SCN4AP35499 1836 aa13.62□□□□□ -0.23
NR1H3-225ENST00000494018 IQCA1LA6NCM1 817 aa13.62□□□□□ -0.23
NR1H3-225ENST00000494018 BICDL1Q6ZP65 573 aa13.62□□□□□ -0.23
NR1H3-225ENST00000494018 LTBP1Q14766 1721 aa13.61□□□□□ -0.23
NR1H3-225ENST00000494018 ZNF831Q5JPB2 1677 aa13.61□□□□□ -0.23
NR1H3-225ENST00000494018 ADAMTS7Q9UKP4 1686 aa13.61□□□□□ -0.23
NR1H3-225ENST00000494018 FYB1O15117 783 aa13.61□□□□□ -0.23
NR1H3-225ENST00000494018 INTS5Q6P9B9 1019 aaKnown RBP13.61□□□□□ -0.23
NR1H3-225ENST00000494018 FLT4P35916 1363 aa13.6□□□□□ -0.23
NR1H3-225ENST00000494018 PRPF38BQ5VTL8 546 aaKnown RBP13.6□□□□□ -0.23
NR1H3-225ENST00000494018 EYA1Q99502 592 aa13.6□□□□□ -0.23
NR1H3-225ENST00000494018 TAOK3Q9H2K8 898 aa13.6□□□□□ -0.23
NR1H3-225ENST00000494018 ZNF541Q9H0D2 1346 aa13.6□□□□□ -0.23
NR1H3-225ENST00000494018 ANKRD31Q8N7Z5 1873 aa13.59□□□□□ -0.23
NR1H3-225ENST00000494018 TJP1Q07157 1748 aa13.59□□□□□ -0.23
NR1H3-225ENST00000494018 NRXN2Q9P2S2 1712 aa13.59□□□□□ -0.23
NR1H3-225ENST00000494018 EPHX2P34913 555 aa13.59□□□□□ -0.23
NR1H3-225ENST00000494018 CABP4P57796 275 aa13.59□□□□□ -0.23
NR1H3-225ENST00000494018 HACL1Q9UJ83 578 aa13.59□□□□□ -0.23
NR1H3-225ENST00000494018 SLX4Q8IY92 1834 aa13.59□□□□□ -0.23
NR1H3-225ENST00000494018 RNF123Q5XPI4 1314 aa13.59□□□□□ -0.23
NR1H3-225ENST00000494018 COL11A2P13942 1736 aaPredicted RBP13.59□□□□□ -0.23
NR1H3-225ENST00000494018 DDX21Q9NR30 783 aaKnown RBP eCLIP13.58□□□□□ -0.24
NR1H3-225ENST00000494018 ADAMTSL1Q8N6G6 1762 aa13.58□□□□□ -0.24
NR1H3-225ENST00000494018 THSD7BQ9C0I4 1608 aa13.57□□□□□ -0.24
NR1H3-225ENST00000494018 L3MBTL3Q96JM7 780 aaPredicted RBP13.57□□□□□ -0.24
NR1H3-225ENST00000494018 SIN3AQ96ST3 1273 aa13.57□□□□□ -0.24
NR1H3-225ENST00000494018 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
NR1H3-225ENST00000494018 ERVV-2B6SEH9 535 aa13.56□□□□□ -0.24
NR1H3-225ENST00000494018 TRAF5O00463 557 aa13.56□□□□□ -0.24
NR1H3-225ENST00000494018 ECE1P42892 770 aa13.56□□□□□ -0.24
NR1H3-225ENST00000494018 NEUROD1Q13562 356 aa13.56□□□□□ -0.24
NR1H3-225ENST00000494018 DNAJC10Q8IXB1 793 aa13.56□□□□□ -0.24
NR1H3-225ENST00000494018 CARD11Q9BXL7 1154 aa13.56□□□□□ -0.24
NR1H3-225ENST00000494018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.55□□□□□ -0.24
NR1H3-225ENST00000494018 CST9Q5W186 159 aa13.54□□□□□ -0.24
NR1H3-225ENST00000494018 NFATC2IPQ8NCF5 419 aa13.54□□□□□ -0.24
NR1H3-225ENST00000494018 ZNF277Q9NRM2 450 aaPredicted RBP13.54□□□□□ -0.24
NR1H3-225ENST00000494018 NARFQ9UHQ1 456 aa13.54□□□□□ -0.24
NR1H3-225ENST00000494018 TRPM7Q96QT4 1865 aa13.54□□□□□ -0.24
NR1H3-225ENST00000494018 NCAPD2Q15021 1401 aa13.54□□□□□ -0.24
NR1H3-225ENST00000494018 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
NR1H3-225ENST00000494018 CIAPIN1Q6FI81 312 aa13.53□□□□□ -0.24
NR1H3-225ENST00000494018 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
NR1H3-225ENST00000494018 LTBP3Q9NS15 1303 aa13.53□□□□□ -0.24
NR1H3-225ENST00000494018 TONSLQ96HA7 1378 aa13.53□□□□□ -0.24
NR1H3-225ENST00000494018 PRPF40BQ6NWY9 871 aaKnown RBP13.52□□□□□ -0.25
NR1H3-225ENST00000494018 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
NR1H3-225ENST00000494018 ZIC5Q96T25 663 aa13.52□□□□□ -0.25
NR1H3-225ENST00000494018 COL15A1P39059 1388 aa13.51□□□□□ -0.25
NR1H3-225ENST00000494018 ZNF530Q6P9A1 599 aaPredicted RBP13.51□□□□□ -0.25
NR1H3-225ENST00000494018 PNMA8AQ86V59 439 aaPredicted RBP13.51□□□□□ -0.25
NR1H3-225ENST00000494018 MAP2K2P36507 400 aa13.5□□□□□ -0.25
NR1H3-225ENST00000494018 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
NR1H3-225ENST00000494018 ZBTB1Q9Y2K1 713 aa13.5□□□□□ -0.25
NR1H3-225ENST00000494018 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
NR1H3-225ENST00000494018 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
NR1H3-225ENST00000494018 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
NR1H3-225ENST00000494018 CANXP27824 592 aaKnown RBP13.49□□□□□ -0.25
NR1H3-225ENST00000494018 PDE6BP35913 854 aa13.49□□□□□ -0.25
NR1H3-225ENST00000494018 MTHFSP49914 203 aa13.49□□□□□ -0.25
NR1H3-225ENST00000494018 PRR5LQ6MZQ0 368 aa13.49□□□□□ -0.25
NR1H3-225ENST00000494018 CYP19A1P11511 503 aaPredicted RBP13.48□□□□□ -0.25
NR1H3-225ENST00000494018 BRIP1Q9BX63 1249 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms