RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 PKD2L1Q9P0L9 805 aa8.2□□□□□ -1.1
CPSF7-213ENST00000494016 SUPT16HQ9Y5B9 1047 aaKnown RBP8.2□□□□□ -1.1
CPSF7-213ENST00000494016 MYO3AQ8NEV4 1616 aa8.2□□□□□ -1.1
CPSF7-213ENST00000494016 NEURL4Q96JN8 1562 aa8.19□□□□□ -1.1
CPSF7-213ENST00000494016 GDF9O60383 454 aa8.19□□□□□ -1.1
CPSF7-213ENST00000494016 RC3H1Q5TC82 1133 aaKnown RBP8.19□□□□□ -1.1
CPSF7-213ENST00000494016 PDXDC2PQ6P474 469 aa8.19□□□□□ -1.1
CPSF7-213ENST00000494016 NDUFB9Q9Y6M9 179 aa8.19□□□□□ -1.1
CPSF7-213ENST00000494016 ZNF142P52746 1687 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-213ENST00000494016 GPR37L1O60883 481 aa8.18□□□□□ -1.1
CPSF7-213ENST00000494016 PRR20EP86478 221 aa8.18□□□□□ -1.1
CPSF7-213ENST00000494016 PRR20CP86479 221 aa8.18□□□□□ -1.1
CPSF7-213ENST00000494016 PRR20DP86480 221 aa8.18□□□□□ -1.1
CPSF7-213ENST00000494016 PRR20BP86481 221 aa8.18□□□□□ -1.1
CPSF7-213ENST00000494016 PRR20AP86496 221 aa8.18□□□□□ -1.1
CPSF7-213ENST00000494016 SH3BP5LQ7L8J4 393 aa8.18□□□□□ -1.1
CPSF7-213ENST00000494016 FOXJ1Q92949 421 aa8.18□□□□□ -1.1
CPSF7-213ENST00000494016 MRS2Q9HD23 443 aa8.18□□□□□ -1.1
CPSF7-213ENST00000494016 EFCAB6Q5THR3 1501 aa8.18□□□□□ -1.1
CPSF7-213ENST00000494016 KIF1BO60333 1816 aa8.17□□□□□ -1.1
CPSF7-213ENST00000494016 DGAT1O75907 488 aa8.17□□□□□ -1.1
CPSF7-213ENST00000494016 HNRNPUQ00839 825 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPSF7-213ENST00000494016 FOXC1Q12948 553 aa8.17□□□□□ -1.1
CPSF7-213ENST00000494016 SH3RF1Q7Z6J0 888 aa8.17□□□□□ -1.1
CPSF7-213ENST00000494016 BPHLQ86WA6 291 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-213ENST00000494016 GPSM3Q9Y4H4 160 aa8.17□□□□□ -1.1
CPSF7-213ENST00000494016 CFAP65Q6ZU64 1925 aaKnown RBP8.17□□□□□ -1.1
CPSF7-213ENST00000494016 VARSP26640 1264 aaKnown RBP8.16□□□□□ -1.1
CPSF7-213ENST00000494016 IQGAP1P46940 1657 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 GGT6Q6P531 493 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 SPATA31D1Q6ZQQ2 1576 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 FAM9BQ8IZU0 186 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 EHBP1Q8NDI1 1231 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 MRGPRX2Q96LB1 330 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 PRM3Q9NNZ6 103 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 UGGT1Q9NYU2 1555 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 KIAA1210Q9ULL0 1709 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 TBC1D2BQ9UPU7 963 aa8.16□□□□□ -1.1
CPSF7-213ENST00000494016 IFT172Q9UG01 1749 aa8.15□□□□□ -1.1
CPSF7-213ENST00000494016 ADGRF5Q8IZF2 1346 aa8.15□□□□□ -1.1
CPSF7-213ENST00000494016 TNFRSF10AO00220 468 aa8.15□□□□□ -1.1
CPSF7-213ENST00000494016 RALBP1Q15311 655 aa8.15□□□□□ -1.1
CPSF7-213ENST00000494016 PNISRQ8TF01 805 aaKnown RBP8.15□□□□□ -1.1
CPSF7-213ENST00000494016 OCSTAMPQ9BR26 566 aa8.15□□□□□ -1.1
CPSF7-213ENST00000494016 ABCC3O15438 1527 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 NPATQ14207 1427 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 WASHC2CQ9Y4E1 1318 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 SIAH2O43255 324 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 TMF1P82094 1093 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 PTK2Q05397 1052 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 AGERQ15109 404 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 CFAP70Q5T0N1 1121 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 ARHGAP9Q9BRR9 750 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 C1QTNF2Q9BXJ5 285 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 PANK3Q9H999 370 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 COG6Q9Y2V7 657 aa8.14□□□□□ -1.11
CPSF7-213ENST00000494016 CEP170BQ9Y4F5 1589 aaPredicted RBP8.14□□□□□ -1.11
CPSF7-213ENST00000494016 SETD1BQ9UPS6 1966 aaKnown RBP8.13□□□□□ -1.11
CPSF7-213ENST00000494016 SCAF11Q99590 1463 aaKnown RBP8.13□□□□□ -1.11
CPSF7-213ENST00000494016 KTN1Q86UP2 1357 aaKnown RBP8.13□□□□□ -1.11
CPSF7-213ENST00000494016 CNGB1Q14028 1251 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-213ENST00000494016 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-213ENST00000494016 FAM174AQ8TBP5 190 aa8.13□□□□□ -1.11
CPSF7-213ENST00000494016 GDPD2Q9HCC8 539 aa8.13□□□□□ -1.11
CPSF7-213ENST00000494016 CAMSAP1Q5T5Y3 1602 aa8.13□□□□□ -1.11
CPSF7-213ENST00000494016 MYOM2P54296 1465 aa8.13□□□□□ -1.11
CPSF7-213ENST00000494016 NRXN1Q9ULB1 1477 aa8.13□□□□□ -1.11
CPSF7-213ENST00000494016 NOS1P29475 1434 aa8.12□□□□□ -1.11
CPSF7-213ENST00000494016 MPNDQ8N594 471 aa8.12□□□□□ -1.11
CPSF7-213ENST00000494016 TOR4AQ9NXH8 423 aa8.12□□□□□ -1.11
CPSF7-213ENST00000494016 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
CPSF7-213ENST00000494016 BRD4O60885 1362 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-213ENST00000494016 ZMYM3Q14202 1370 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 PARD3Q8TEW0 1356 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 RPGRIP1LQ68CZ1 1315 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 MYBBP1AQ9BQG0 1328 aaKnown RBP8.11□□□□□ -1.11
CPSF7-213ENST00000494016 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 FAM187AA6NFU0 413 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 ZBBXA8MT70 800 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 IRF5Q13568 498 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 ERFEQ4G0M1 354 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 TRMT44Q8IYL2 757 aaKnown RBP8.11□□□□□ -1.11
CPSF7-213ENST00000494016 CYP4X1Q8N118 509 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 SNIP1Q8TAD8 396 aaKnown RBP8.11□□□□□ -1.11
CPSF7-213ENST00000494016 POM121Q96HA1 1249 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 CARD14Q9BXL6 1004 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 C14orf93Q9H972 538 aaKnown RBP8.11□□□□□ -1.11
CPSF7-213ENST00000494016 STK17AQ9UEE5 414 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 ADGRB3O60242 1522 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 PPLO60437 1756 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 ARHGAP31Q2M1Z3 1444 aa8.11□□□□□ -1.11
CPSF7-213ENST00000494016 ZBED9Q6R2W3 1325 aa8.1□□□□□ -1.11
CPSF7-213ENST00000494016 RAD21O60216 631 aa8.1□□□□□ -1.11
CPSF7-213ENST00000494016 FBXO45P0C2W1 286 aa8.1□□□□□ -1.11
CPSF7-213ENST00000494016 NR1H3Q13133 447 aa8.1□□□□□ -1.11
CPSF7-213ENST00000494016 ZBTB33Q86T24 672 aa8.1□□□□□ -1.11
CPSF7-213ENST00000494016 ADAM32Q8TC27 787 aa8.1□□□□□ -1.11
CPSF7-213ENST00000494016 TMC1Q8TDI8 760 aa8.1□□□□□ -1.11
CPSF7-213ENST00000494016 PIK3C2BO00750 1634 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms