RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 C4AP0C0L4 1744 aa15.45■□□□□ 0.06
UBA3-211ENST00000493957 COL24A1Q17RW2 1714 aa15.45■□□□□ 0.06
UBA3-211ENST00000493957 ATP6V1AP38606 617 aa15.44■□□□□ 0.06
UBA3-211ENST00000493957 PNPLA7Q6ZV29 1317 aa15.43■□□□□ 0.06
UBA3-211ENST00000493957 KCNQ3O43525 872 aa15.43■□□□□ 0.06
UBA3-211ENST00000493957 NEFMP07197 916 aa15.43■□□□□ 0.06
UBA3-211ENST00000493957 TEFQ10587 303 aa15.43■□□□□ 0.06
UBA3-211ENST00000493957 MRS2Q9HD23 443 aa15.43■□□□□ 0.06
UBA3-211ENST00000493957 TMPOP42166 694 aaKnown RBP15.42■□□□□ 0.06
UBA3-211ENST00000493957 RTF1Q92541 710 aaKnown RBP15.42■□□□□ 0.06
UBA3-211ENST00000493957 DCBLD2Q96PD2 775 aa15.42■□□□□ 0.06
UBA3-211ENST00000493957 PNNQ9H307 717 aaKnown RBP15.42■□□□□ 0.06
UBA3-211ENST00000493957 SRCAPQ6ZRS2 3230 aa15.41■□□□□ 0.06
UBA3-211ENST00000493957 SENP3-EIF4A1A0A087X0R7 540 aa15.41■□□□□ 0.06
UBA3-211ENST00000493957 RUNDC1Q96C34 613 aa15.41■□□□□ 0.06
UBA3-211ENST00000493957 TFCP2L1Q9NZI6 479 aa15.41■□□□□ 0.06
UBA3-211ENST00000493957 LAMB4A4D0S4 1761 aa15.4■□□□□ 0.06
UBA3-211ENST00000493957 HTATSF1O43719 755 aaKnown RBP15.4■□□□□ 0.06
UBA3-211ENST00000493957 ZBTB7AO95365 584 aa15.4■□□□□ 0.06
UBA3-211ENST00000493957 RIPK4P57078 832 aa15.4■□□□□ 0.06
UBA3-211ENST00000493957 NEUROD2Q15784 382 aa15.4■□□□□ 0.06
UBA3-211ENST00000493957 PNISRQ8TF01 805 aaKnown RBP15.4■□□□□ 0.06
UBA3-211ENST00000493957 DNAJC10Q8IXB1 793 aa15.39■□□□□ 0.05
UBA3-211ENST00000493957 AK7Q96M32 723 aa15.39■□□□□ 0.05
UBA3-211ENST00000493957 MIS18AQ9NYP9 233 aa15.39■□□□□ 0.05
UBA3-211ENST00000493957 BTBD11A6QL63 1104 aa15.38■□□□□ 0.05
UBA3-211ENST00000493957 PHF14O94880 888 aa15.38■□□□□ 0.05
UBA3-211ENST00000493957 ZNF790Q6PG37 636 aa15.38■□□□□ 0.05
UBA3-211ENST00000493957 COL23A1Q86Y22 540 aaPredicted RBP15.38■□□□□ 0.05
UBA3-211ENST00000493957 ZNF496Q96IT1 587 aaPredicted RBP15.38■□□□□ 0.05
UBA3-211ENST00000493957 APAF1O14727 1248 aa15.37■□□□□ 0.05
UBA3-211ENST00000493957 GNPATO15228 680 aa15.37■□□□□ 0.05
UBA3-211ENST00000493957 TRIM35Q9UPQ4 493 aa15.37■□□□□ 0.05
UBA3-211ENST00000493957 CRKLP46109 303 aaKnown RBP15.36■□□□□ 0.05
UBA3-211ENST00000493957 TTC5Q8N0Z6 440 aa15.36■□□□□ 0.05
UBA3-211ENST00000493957 CNTNAP4Q9C0A0 1308 aa15.36■□□□□ 0.05
UBA3-211ENST00000493957 HEG1Q9ULI3 1381 aa15.36■□□□□ 0.05
UBA3-211ENST00000493957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.35■□□□□ 0.05
UBA3-211ENST00000493957 PRAMEF22A3QJZ6 481 aa15.35■□□□□ 0.05
UBA3-211ENST00000493957 TAF7Q15545 349 aaPredicted RBP15.35■□□□□ 0.05
UBA3-211ENST00000493957 CYP19A1P11511 503 aaPredicted RBP15.34■□□□□ 0.05
UBA3-211ENST00000493957 PTGER2P43116 358 aa15.34■□□□□ 0.05
UBA3-211ENST00000493957 INTS5Q6P9B9 1019 aaKnown RBP15.34■□□□□ 0.05
UBA3-211ENST00000493957 RC3H1Q5TC82 1133 aaKnown RBP15.33■□□□□ 0.04
UBA3-211ENST00000493957 MSL1Q68DK7 614 aa15.33■□□□□ 0.04
UBA3-211ENST00000493957 FMNL2Q96PY5 1086 aa15.33■□□□□ 0.04
UBA3-211ENST00000493957 MTFR1LQ9H019 292 aa15.33■□□□□ 0.04
UBA3-211ENST00000493957 SPON1Q9HCB6 807 aa15.33■□□□□ 0.04
UBA3-211ENST00000493957 FAM9BQ8IZU0 186 aa15.32■□□□□ 0.04
UBA3-211ENST00000493957 VSIG10Q8N0Z9 540 aa15.32■□□□□ 0.04
UBA3-211ENST00000493957 ZNF579Q8NAF0 562 aaKnown RBP15.32■□□□□ 0.04
UBA3-211ENST00000493957 SGIP1Q9BQI5 828 aa15.32■□□□□ 0.04
UBA3-211ENST00000493957 CCDC87Q9NVE4 849 aa15.32■□□□□ 0.04
UBA3-211ENST00000493957 ZBTB1Q9Y2K1 713 aa15.32■□□□□ 0.04
UBA3-211ENST00000493957 RPS6KA4O75676 772 aa15.31■□□□□ 0.04
UBA3-211ENST00000493957 SSFA2P28290 1259 aa15.31■□□□□ 0.04
UBA3-211ENST00000493957 LMOD3Q0VAK6 560 aa15.31■□□□□ 0.04
UBA3-211ENST00000493957 BCORQ6W2J9 1755 aa15.31■□□□□ 0.04
UBA3-211ENST00000493957 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
UBA3-211ENST00000493957 DIEXFQ68CQ4 756 aaKnown RBP15.3■□□□□ 0.04
UBA3-211ENST00000493957 RTCBQ9Y3I0 505 aaKnown RBP15.3■□□□□ 0.04
UBA3-211ENST00000493957 USP16Q9Y5T5 823 aa15.3■□□□□ 0.04
UBA3-211ENST00000493957 SOS1Q07889 1333 aaPredicted RBP15.29■□□□□ 0.04
UBA3-211ENST00000493957 PIP4K2AP48426 406 aaPredicted RBP15.29■□□□□ 0.04
UBA3-211ENST00000493957 EIF4A1P60842 406 aaKnown RBP15.29■□□□□ 0.04
UBA3-211ENST00000493957 FLAD1Q8NFF5 587 aa15.29■□□□□ 0.04
UBA3-211ENST00000493957 ARHGEF1Q92888 912 aaKnown RBP15.29■□□□□ 0.04
UBA3-211ENST00000493957 SRP68Q9UHB9 627 aaKnown RBP15.29■□□□□ 0.04
UBA3-211ENST00000493957 TSPYL4Q9UJ04 414 aa15.29■□□□□ 0.04
UBA3-211ENST00000493957 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
UBA3-211ENST00000493957 A1BGP04217 495 aa15.28■□□□□ 0.04
UBA3-211ENST00000493957 HMGB2P26583 209 aaKnown RBP15.28■□□□□ 0.04
UBA3-211ENST00000493957 CANXP27824 592 aaKnown RBP15.28■□□□□ 0.04
UBA3-211ENST00000493957 SLC16A10Q8TF71 515 aa15.28■□□□□ 0.04
UBA3-211ENST00000493957 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
UBA3-211ENST00000493957 COL15A1P39059 1388 aa15.27■□□□□ 0.04
UBA3-211ENST00000493957 SNRPA1P09661 255 aaKnown RBP15.27■□□□□ 0.04
UBA3-211ENST00000493957 KRT24Q2M2I5 525 aa15.27■□□□□ 0.04
UBA3-211ENST00000493957 TRAPPC3LQ5T215 181 aa15.27■□□□□ 0.04
UBA3-211ENST00000493957 MIER1Q8N108 512 aa15.27■□□□□ 0.04
UBA3-211ENST00000493957 CHL1O00533 1208 aa15.26■□□□□ 0.03
UBA3-211ENST00000493957 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
UBA3-211ENST00000493957 SALL2Q9Y467 1007 aaPredicted RBP15.26■□□□□ 0.03
UBA3-211ENST00000493957 NUP98P52948 1817 aa15.25■□□□□ 0.03
UBA3-211ENST00000493957 GIGYF1O75420 1035 aaPredicted RBP15.25■□□□□ 0.03
UBA3-211ENST00000493957 STARD3NLO95772 234 aa15.25■□□□□ 0.03
UBA3-211ENST00000493957 PPP1R1BQ9UD71 204 aaPredicted RBP15.25■□□□□ 0.03
UBA3-211ENST00000493957 KIF13BQ9NQT8 1826 aa15.24■□□□□ 0.03
UBA3-211ENST00000493957 USP42Q9H9J4 1324 aaKnown RBP15.24■□□□□ 0.03
UBA3-211ENST00000493957 NBPF26B4DH59 902 aa15.24■□□□□ 0.03
UBA3-211ENST00000493957 GYS1P13807 737 aa15.24■□□□□ 0.03
UBA3-211ENST00000493957 RFC4P35249 363 aa15.24■□□□□ 0.03
UBA3-211ENST00000493957 EIF5P55010 431 aaKnown RBP15.24■□□□□ 0.03
UBA3-211ENST00000493957 NBPF10Q6P3W6 841 aaKnown RBP15.24■□□□□ 0.03
UBA3-211ENST00000493957 NBPF15Q8N660 670 aa15.24■□□□□ 0.03
UBA3-211ENST00000493957 TEX13AQ9BXU3 409 aaPredicted RBP15.24■□□□□ 0.03
UBA3-211ENST00000493957 ZNF330Q9Y3S2 320 aaPredicted RBP15.24■□□□□ 0.03
UBA3-211ENST00000493957 KIAA1551Q9HCM1 1747 aa15.23■□□□□ 0.03
UBA3-211ENST00000493957 CCER2I3L3R5 266 aa15.23■□□□□ 0.03
UBA3-211ENST00000493957 ZNF853P0CG23 659 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms