RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 THBS1P07996 1170 aa7.63□□□□□ -1.19
CD46-217ENST00000493796 SRPK2P78362 688 aaKnown RBP7.63□□□□□ -1.19
CD46-217ENST00000493796 KRT76Q01546 638 aa7.63□□□□□ -1.19
CD46-217ENST00000493796 TEAD4Q15561 434 aa7.63□□□□□ -1.19
CD46-217ENST00000493796 TBCELQ5QJ74 424 aa7.63□□□□□ -1.19
CD46-217ENST00000493796 ZDHHC1Q8WTX9 485 aa7.63□□□□□ -1.19
CD46-217ENST00000493796 ARXQ96QS3 562 aa7.63□□□□□ -1.19
CD46-217ENST00000493796 NUCKS1Q9H1E3 243 aaKnown RBP7.63□□□□□ -1.19
CD46-217ENST00000493796 TSPAN10Q9H1Z9 355 aaPredicted RBP7.63□□□□□ -1.19
CD46-217ENST00000493796 C1orf115Q9H7X2 142 aa7.63□□□□□ -1.19
CD46-217ENST00000493796 ATP4AP20648 1035 aa7.62□□□□□ -1.19
CD46-217ENST00000493796 C1orf216Q8TAB5 229 aa7.62□□□□□ -1.19
CD46-217ENST00000493796 AIDAQ96BJ3 306 aa7.62□□□□□ -1.19
CD46-217ENST00000493796 COL25A1Q9BXS0 654 aaPredicted RBP7.62□□□□□ -1.19
CD46-217ENST00000493796 RUBCNLQ9H714 662 aa7.62□□□□□ -1.19
CD46-217ENST00000493796 ZDHHC3Q9NYG2 299 aa7.62□□□□□ -1.19
CD46-217ENST00000493796 PARP3Q9Y6F1 533 aa7.62□□□□□ -1.19
CD46-217ENST00000493796 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.61□□□□□ -1.19
CD46-217ENST00000493796 CSB-PGBD3P0DP91 1061 aa7.61□□□□□ -1.19
CD46-217ENST00000493796 NOS2P35228 1153 aa7.61□□□□□ -1.19
CD46-217ENST00000493796 PSMA6P60900 246 aaKnown RBP7.61□□□□□ -1.19
CD46-217ENST00000493796 INSM1Q01101 510 aaPredicted RBP7.61□□□□□ -1.19
CD46-217ENST00000493796 LBRQ14739 615 aaKnown RBP7.61□□□□□ -1.19
CD46-217ENST00000493796 NBPF1Q3BBV0 1214 aa7.61□□□□□ -1.19
CD46-217ENST00000493796 RNFT1Q5M7Z0 435 aa7.61□□□□□ -1.19
CD46-217ENST00000493796 PGBD3Q8N328 593 aa7.61□□□□□ -1.19
CD46-217ENST00000493796 CCDC82Q8N4S0 544 aa7.61□□□□□ -1.19
CD46-217ENST00000493796 L3MBTL2Q969R5 705 aa7.61□□□□□ -1.19
CD46-217ENST00000493796 GTPBP3Q969Y2 492 aaKnown RBP7.61□□□□□ -1.19
CD46-217ENST00000493796 CRISPLD1Q9H336 500 aa7.61□□□□□ -1.19
CD46-217ENST00000493796 GAS6Q14393 721 aa7.6□□□□□ -1.19
CD46-217ENST00000493796 FOXR1Q6PIV2 292 aa7.6□□□□□ -1.19
CD46-217ENST00000493796 CNTNAP3BQ96NU0 1288 aa7.6□□□□□ -1.19
CD46-217ENST00000493796 CNTNAP3Q9BZ76 1288 aa7.6□□□□□ -1.19
CD46-217ENST00000493796 SERTM1A2A2V5 107 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 GPR25O00155 361 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 EML1O00423 815 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 C21orf2O43822 256 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 TATP17735 454 aaPredicted RBP7.59□□□□□ -1.19
CD46-217ENST00000493796 TXLNAP40222 546 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 UBAP2LQ14157 1087 aaKnown RBP7.59□□□□□ -1.19
CD46-217ENST00000493796 ELOAQ14241 798 aaKnown RBP7.59□□□□□ -1.19
CD46-217ENST00000493796 EFHC2Q5JST6 749 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 POTEAQ6S8J7 498 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 FAM200AQ8TCP9 573 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 PBXIP1Q96AQ6 731 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 HINFPQ9BQA5 517 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 TIMELESSQ9UNS1 1208 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 NOVA2Q9UNW9 492 aaKnown RBP7.59□□□□□ -1.19
CD46-217ENST00000493796 ZNF232Q9UNY5 417 aa7.59□□□□□ -1.19
CD46-217ENST00000493796 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
CD46-217ENST00000493796 SH3PXD2AQ5TCZ1 1133 aa7.58□□□□□ -1.2
CD46-217ENST00000493796 SCG3Q8WXD2 468 aaKnown RBP7.58□□□□□ -1.2
CD46-217ENST00000493796 TRERF1Q96PN7 1200 aa7.58□□□□□ -1.2
CD46-217ENST00000493796 ZMIZ1Q9ULJ6 1067 aa7.58□□□□□ -1.2
CD46-217ENST00000493796 CHMP3Q9Y3E7 222 aa7.58□□□□□ -1.2
CD46-217ENST00000493796 ATAD2Q6PL18 1390 aa7.58□□□□□ -1.2
CD46-217ENST00000493796 A0A1W2PNR3 127 aa7.57□□□□□ -1.2
CD46-217ENST00000493796 PPP1R12BO60237 982 aaPredicted RBP7.57□□□□□ -1.2
CD46-217ENST00000493796 LGR5O75473 907 aa7.57□□□□□ -1.2
CD46-217ENST00000493796 ATG7O95352 703 aa7.57□□□□□ -1.2
CD46-217ENST00000493796 HIRAP54198 1017 aaPredicted RBP7.57□□□□□ -1.2
CD46-217ENST00000493796 ARSJQ5FYB0 599 aaPredicted RBP7.57□□□□□ -1.2
CD46-217ENST00000493796 STAG2Q8N3U4 1231 aa7.57□□□□□ -1.2
CD46-217ENST00000493796 GAS2L2Q8NHY3 880 aa7.57□□□□□ -1.2
CD46-217ENST00000493796 ZIC5Q96T25 663 aa7.57□□□□□ -1.2
CD46-217ENST00000493796 NLRP8Q86W28 1048 aa7.56□□□□□ -1.2
CD46-217ENST00000493796 ZSCAN1Q8NBB4 408 aa7.56□□□□□ -1.2
CD46-217ENST00000493796 CFHR5Q9BXR6 569 aa7.56□□□□□ -1.2
CD46-217ENST00000493796 IGFBP4P22692 258 aa7.55□□□□□ -1.2
CD46-217ENST00000493796 FIGNL1Q6PIW4 674 aa7.55□□□□□ -1.2
CD46-217ENST00000493796 C7orf43Q8WVR3 580 aa7.55□□□□□ -1.2
CD46-217ENST00000493796 C2orf49Q9BVC5 232 aaPredicted RBP7.55□□□□□ -1.2
CD46-217ENST00000493796 ZCCHC2Q9C0B9 1178 aaKnown RBP7.55□□□□□ -1.2
CD46-217ENST00000493796 MBIPQ9NS73 344 aa7.55□□□□□ -1.2
CD46-217ENST00000493796 NDFIP2Q9NV92 336 aa7.55□□□□□ -1.2
CD46-217ENST00000493796 HCN4Q9Y3Q4 1203 aa7.55□□□□□ -1.2
CD46-217ENST00000493796 BNIP3LO60238 219 aa7.54□□□□□ -1.2
CD46-217ENST00000493796 WEE1P30291 646 aa7.54□□□□□ -1.2
CD46-217ENST00000493796 SRSF11Q05519 484 aaKnown RBP7.54□□□□□ -1.2
CD46-217ENST00000493796 C1orf53Q5VUE5 145 aa7.54□□□□□ -1.2
CD46-217ENST00000493796 BICDL1Q6ZP65 573 aa7.54□□□□□ -1.2
CD46-217ENST00000493796 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
CD46-217ENST00000493796 CHMP7Q8WUX9 453 aaPredicted RBP7.54□□□□□ -1.2
CD46-217ENST00000493796 PHACTR1Q9C0D0 580 aa7.54□□□□□ -1.2
CD46-217ENST00000493796 PHF24Q9UPV7 400 aa7.54□□□□□ -1.2
CD46-217ENST00000493796 GPC6Q9Y625 555 aaPredicted RBP7.54□□□□□ -1.2
CD46-217ENST00000493796 ACIN1Q9UKV3 1341 aaKnown RBP7.53□□□□□ -1.2
CD46-217ENST00000493796 ADAMTS2O95450 1211 aa7.53□□□□□ -1.2
CD46-217ENST00000493796 SLURP2P0DP57 97 aa7.53□□□□□ -1.2
CD46-217ENST00000493796 SWI5Q1ZZU3 235 aa7.53□□□□□ -1.2
CD46-217ENST00000493796 RHPN1Q8TCX5 695 aa7.53□□□□□ -1.2
CD46-217ENST00000493796 ABHD17AQ96GS6 310 aa7.53□□□□□ -1.2
CD46-217ENST00000493796 STK17AQ9UEE5 414 aa7.53□□□□□ -1.2
CD46-217ENST00000493796 ATXN7L1Q9ULK2 861 aaPredicted RBP7.53□□□□□ -1.2
CD46-217ENST00000493796 PCDHGC4Q9Y5F7 938 aa7.53□□□□□ -1.2
CD46-217ENST00000493796 ATXN7O15265 892 aaPredicted RBP7.52□□□□□ -1.21
CD46-217ENST00000493796 MX2P20592 715 aa7.52□□□□□ -1.21
CD46-217ENST00000493796 FAM69CQ0P6D2 419 aa7.52□□□□□ -1.21
CD46-217ENST00000493796 TMEM164Q5U3C3 297 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms