RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ARHGEF1Q92888 912 aaKnown RBP18.21■□□□□ 0.51
CCM2-217ENST00000492883 ZBTB1Q9Y2K1 713 aa18.21■□□□□ 0.51
CCM2-217ENST00000492883 C5P01031 1676 aa18.2■□□□□ 0.5
CCM2-217ENST00000492883 GIGYF1O75420 1035 aaPredicted RBP18.2■□□□□ 0.5
CCM2-217ENST00000492883 A1BGP04217 495 aa18.2■□□□□ 0.5
CCM2-217ENST00000492883 GNAI1P63096 354 aa18.2■□□□□ 0.5
CCM2-217ENST00000492883 IFT57Q9NWB7 429 aa18.2■□□□□ 0.5
CCM2-217ENST00000492883 NPM2Q86SE8 214 aaKnown RBP18.19■□□□□ 0.5
CCM2-217ENST00000492883 NGEFQ8N5V2 710 aa18.19■□□□□ 0.5
CCM2-217ENST00000492883 MBIPQ9NS73 344 aa18.18■□□□□ 0.5
CCM2-217ENST00000492883 ZNF330Q9Y3S2 320 aaPredicted RBP18.18■□□□□ 0.5
CCM2-217ENST00000492883 ZNF853P0CG23 659 aa18.17■□□□□ 0.5
CCM2-217ENST00000492883 POLD1P28340 1107 aa18.17■□□□□ 0.5
CCM2-217ENST00000492883 MSL1Q68DK7 614 aa18.17■□□□□ 0.5
CCM2-217ENST00000492883 PPP1R1BQ9UD71 204 aaPredicted RBP18.17■□□□□ 0.5
CCM2-217ENST00000492883 ZNF831Q5JPB2 1677 aa18.17■□□□□ 0.5
CCM2-217ENST00000492883 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
CCM2-217ENST00000492883 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
CCM2-217ENST00000492883 SIPA1L3O60292 1781 aaPredicted RBP18.17■□□□□ 0.5
CCM2-217ENST00000492883 WDR63Q8IWG1 891 aa18.16■□□□□ 0.5
CCM2-217ENST00000492883 ARXQ96QS3 562 aa18.16■□□□□ 0.5
CCM2-217ENST00000492883 A0A087WZG4 1122 aa18.15■□□□□ 0.5
CCM2-217ENST00000492883 ZPR1O75312 459 aa18.15■□□□□ 0.5
CCM2-217ENST00000492883 EIF2S2P20042 333 aaKnown RBP18.15■□□□□ 0.5
CCM2-217ENST00000492883 IL6STP40189 918 aaPredicted RBP18.15■□□□□ 0.5
CCM2-217ENST00000492883 PTGER2P43116 358 aa18.15■□□□□ 0.5
CCM2-217ENST00000492883 PIP4K2AP48426 406 aaPredicted RBP18.15■□□□□ 0.5
CCM2-217ENST00000492883 VIRMAQ69YN4 1812 aaKnown RBP18.14■□□□□ 0.5
CCM2-217ENST00000492883 EIF5P55010 431 aaKnown RBP18.14■□□□□ 0.49
CCM2-217ENST00000492883 KRT24Q2M2I5 525 aa18.14■□□□□ 0.49
CCM2-217ENST00000492883 SRP68Q9UHB9 627 aaKnown RBP18.14■□□□□ 0.49
CCM2-217ENST00000492883 IL16Q14005 1332 aa18.14■□□□□ 0.49
CCM2-217ENST00000492883 TJP1Q07157 1748 aa18.13■□□□□ 0.49
CCM2-217ENST00000492883 UBR2Q8IWV8 1755 aa18.13■□□□□ 0.49
CCM2-217ENST00000492883 NLGN1Q8N2Q7 840 aa18.13■□□□□ 0.49
CCM2-217ENST00000492883 TAF1LQ8IZX4 1826 aa18.13■□□□□ 0.49
CCM2-217ENST00000492883 DUSP27Q5VZP5 1158 aa18.12■□□□□ 0.49
CCM2-217ENST00000492883 NECTIN2Q92692 538 aa18.12■□□□□ 0.49
CCM2-217ENST00000492883 TSR2Q969E8 191 aaKnown RBP18.12■□□□□ 0.49
CCM2-217ENST00000492883 NARFQ9UHQ1 456 aa18.12■□□□□ 0.49
CCM2-217ENST00000492883 COL15A1P39059 1388 aa18.12■□□□□ 0.49
CCM2-217ENST00000492883 CASZ1Q86V15 1759 aa18.12■□□□□ 0.49
CCM2-217ENST00000492883 NBPF26B4DH59 902 aa18.11■□□□□ 0.49
CCM2-217ENST00000492883 ELL2O00472 640 aaPredicted RBP18.11■□□□□ 0.49
CCM2-217ENST00000492883 GYS1P13807 737 aa18.11■□□□□ 0.49
CCM2-217ENST00000492883 USPL1Q5W0Q7 1092 aa18.11■□□□□ 0.49
CCM2-217ENST00000492883 NBPF10Q6P3W6 841 aaKnown RBP18.11■□□□□ 0.49
CCM2-217ENST00000492883 NBPF15Q8N660 670 aa18.11■□□□□ 0.49
CCM2-217ENST00000492883 SGIP1Q9BQI5 828 aa18.11■□□□□ 0.49
CCM2-217ENST00000492883 TBC1D2BQ9UPU7 963 aa18.11■□□□□ 0.49
CCM2-217ENST00000492883 USP42Q9H9J4 1324 aaKnown RBP18.11■□□□□ 0.49
CCM2-217ENST00000492883 CICQ96RK0 1608 aaPredicted RBP18.1■□□□□ 0.49
CCM2-217ENST00000492883 MYL6BP14649 208 aa18.1■□□□□ 0.49
CCM2-217ENST00000492883 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
CCM2-217ENST00000492883 HOXB7P09629 217 aa18.09■□□□□ 0.49
CCM2-217ENST00000492883 DZIP3Q86Y13 1208 aaKnown RBP18.09■□□□□ 0.49
CCM2-217ENST00000492883 ERBB4Q15303 1308 aa18.08■□□□□ 0.49
CCM2-217ENST00000492883 GOLGA2Q08379 1002 aa18.08■□□□□ 0.48
CCM2-217ENST00000492883 FKBP8Q14318 412 aa18.08■□□□□ 0.48
CCM2-217ENST00000492883 HDGFL1Q5TGJ6 251 aa18.08■□□□□ 0.48
CCM2-217ENST00000492883 C8orf58Q8NAV2 365 aa18.08■□□□□ 0.48
CCM2-217ENST00000492883 MYH16Q9H6N6 1097 aa18.08■□□□□ 0.48
CCM2-217ENST00000492883 KDM3BQ7LBC6 1761 aa18.07■□□□□ 0.48
CCM2-217ENST00000492883 MMP10P09238 476 aa18.07■□□□□ 0.48
CCM2-217ENST00000492883 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
CCM2-217ENST00000492883 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
CCM2-217ENST00000492883 UBR3Q6ZT12 1888 aa18.06■□□□□ 0.48
CCM2-217ENST00000492883 CHMP4AQ9BY43 222 aa18.06■□□□□ 0.48
CCM2-217ENST00000492883 SPINK5Q9NQ38 1064 aaPredicted RBP18.06■□□□□ 0.48
CCM2-217ENST00000492883 PARP3Q9Y6F1 533 aa18.06■□□□□ 0.48
CCM2-217ENST00000492883 TUBGCP6Q96RT7 1819 aa18.05■□□□□ 0.48
CCM2-217ENST00000492883 ZNF521Q96K83 1311 aa18.05■□□□□ 0.48
CCM2-217ENST00000492883 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
CCM2-217ENST00000492883 CAMTA2O94983 1202 aa18.05■□□□□ 0.48
CCM2-217ENST00000492883 ANXA1P04083 346 aa18.05■□□□□ 0.48
CCM2-217ENST00000492883 TSPYL6Q8N831 410 aa18.05■□□□□ 0.48
CCM2-217ENST00000492883 BCL2L12Q9HB09 334 aa18.05■□□□□ 0.48
CCM2-217ENST00000492883 MYH14Q7Z406 1995 aaKnown RBP18.04■□□□□ 0.48
CCM2-217ENST00000492883 PDIA6Q15084 440 aa18.04■□□□□ 0.48
CCM2-217ENST00000492883 PROSER3Q2NL68 480 aa18.04■□□□□ 0.48
CCM2-217ENST00000492883 TWISTNBQ3B726 338 aaPredicted RBP18.04■□□□□ 0.48
CCM2-217ENST00000492883 KIF6Q6ZMV9 814 aa18.04■□□□□ 0.48
CCM2-217ENST00000492883 BICDL1Q6ZP65 573 aa18.04■□□□□ 0.48
CCM2-217ENST00000492883 FHDC1Q9C0D6 1143 aaPredicted RBP18.04■□□□□ 0.48
CCM2-217ENST00000492883 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
CCM2-217ENST00000492883 CHPF2Q9P2E5 772 aa18.04■□□□□ 0.48
CCM2-217ENST00000492883 DBF4Q9UBU7 674 aaPredicted RBP18.04■□□□□ 0.48
CCM2-217ENST00000492883 LRP5O75197 1615 aa18.03■□□□□ 0.48
CCM2-217ENST00000492883 TM4SF1P30408 202 aa18.03■□□□□ 0.48
CCM2-217ENST00000492883 EXOSC9Q06265 439 aaKnown RBP18.03■□□□□ 0.48
CCM2-217ENST00000492883 ZNF652Q9Y2D9 606 aa18.03■□□□□ 0.48
CCM2-217ENST00000492883 E9PSI1 815 aa18.02■□□□□ 0.48
CCM2-217ENST00000492883 HNRNPUQ00839 825 aaKnown RBP eCLIP18.02■□□□□ 0.48
CCM2-217ENST00000492883 AIMP1Q12904 312 aaKnown RBP18.02■□□□□ 0.48
CCM2-217ENST00000492883 NFIXQ14938 502 aa18.02■□□□□ 0.48
CCM2-217ENST00000492883 CCDC30Q5VVM6 783 aa18.02■□□□□ 0.48
CCM2-217ENST00000492883 TTLL7Q6ZT98 887 aa18.02■□□□□ 0.48
CCM2-217ENST00000492883 COPS6Q7L5N1 327 aa18.02■□□□□ 0.48
CCM2-217ENST00000492883 TBC1D9BQ66K14 1250 aa18.01■□□□□ 0.47
CCM2-217ENST00000492883 CLEC4GQ6UXB4 293 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms