RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 ADAMTS8Q9UP79 889 aa21.03■□□□□ 0.96
PKP4-214ENST00000492496 ZBTB1Q9Y2K1 713 aa21.03■□□□□ 0.96
PKP4-214ENST00000492496 USP42Q9H9J4 1324 aaKnown RBP21.03■□□□□ 0.96
PKP4-214ENST00000492496 RIPK4P57078 832 aa21.02■□□□□ 0.96
PKP4-214ENST00000492496 LMOD3Q0VAK6 560 aa21.02■□□□□ 0.96
PKP4-214ENST00000492496 KLHL34Q8N239 644 aa21.02■□□□□ 0.96
PKP4-214ENST00000492496 COL15A1P39059 1388 aa21.01■□□□□ 0.95
PKP4-214ENST00000492496 CD2APQ9Y5K6 639 aa21.01■□□□□ 0.95
PKP4-214ENST00000492496 KIF13BQ9NQT8 1826 aa21■□□□□ 0.95
PKP4-214ENST00000492496 MMP10P09238 476 aa21■□□□□ 0.95
PKP4-214ENST00000492496 SNRPA1P09661 255 aaKnown RBP21■□□□□ 0.95
PKP4-214ENST00000492496 CCDC146Q8IYE0 955 aa21■□□□□ 0.95
PKP4-214ENST00000492496 PIAS4Q8N2W9 510 aaPredicted RBP21■□□□□ 0.95
PKP4-214ENST00000492496 LAMB4A4D0S4 1761 aa21■□□□□ 0.95
PKP4-214ENST00000492496 ANP32CO43423 234 aa20.99■□□□□ 0.95
PKP4-214ENST00000492496 ZPR1O75312 459 aa20.99■□□□□ 0.95
PKP4-214ENST00000492496 CANXP27824 592 aaKnown RBP20.99■□□□□ 0.95
PKP4-214ENST00000492496 SRP68Q9UHB9 627 aaKnown RBP20.99■□□□□ 0.95
PKP4-214ENST00000492496 EIF5P55010 431 aaKnown RBP20.98■□□□□ 0.95
PKP4-214ENST00000492496 THUMPD2Q9BTF0 503 aaKnown RBP20.98■□□□□ 0.95
PKP4-214ENST00000492496 NARFQ9UHQ1 456 aa20.98■□□□□ 0.95
PKP4-214ENST00000492496 A0A087WZG4 1122 aa20.97■□□□□ 0.95
PKP4-214ENST00000492496 NLGN2Q8NFZ4 835 aa20.97■□□□□ 0.95
PKP4-214ENST00000492496 MIS18AQ9NYP9 233 aa20.97■□□□□ 0.95
PKP4-214ENST00000492496 USP16Q9Y5T5 823 aa20.97■□□□□ 0.95
PKP4-214ENST00000492496 IL6STP40189 918 aaPredicted RBP20.96■□□□□ 0.95
PKP4-214ENST00000492496 BABAM1Q9NWV8 329 aa20.96■□□□□ 0.95
PKP4-214ENST00000492496 PARP3Q9Y6F1 533 aa20.96■□□□□ 0.95
PKP4-214ENST00000492496 A1BGP04217 495 aa20.95■□□□□ 0.94
PKP4-214ENST00000492496 FKBP8Q14318 412 aa20.95■□□□□ 0.94
PKP4-214ENST00000492496 USPL1Q5W0Q7 1092 aa20.95■□□□□ 0.94
PKP4-214ENST00000492496 RRP7AQ9Y3A4 280 aaKnown RBP20.95■□□□□ 0.94
PKP4-214ENST00000492496 SCN7AQ01118 1682 aa20.94■□□□□ 0.94
PKP4-214ENST00000492496 CHD4Q14839 1912 aa20.94■□□□□ 0.94
PKP4-214ENST00000492496 PRAMEF22A3QJZ6 481 aa20.93■□□□□ 0.94
PKP4-214ENST00000492496 EIF4A1P60842 406 aaKnown RBP20.93■□□□□ 0.94
PKP4-214ENST00000492496 NEUROD2Q15784 382 aa20.93■□□□□ 0.94
PKP4-214ENST00000492496 BCORQ6W2J9 1755 aa20.92■□□□□ 0.94
PKP4-214ENST00000492496 TM4SF1P30408 202 aa20.92■□□□□ 0.94
PKP4-214ENST00000492496 CCDC184Q52MB2 194 aa20.92■□□□□ 0.94
PKP4-214ENST00000492496 NPM2Q86SE8 214 aaKnown RBP20.92■□□□□ 0.94
PKP4-214ENST00000492496 TSPYL4Q9UJ04 414 aa20.92■□□□□ 0.94
PKP4-214ENST00000492496 TRIM35Q9UPQ4 493 aa20.92■□□□□ 0.94
PKP4-214ENST00000492496 AFDNP55196 1824 aaKnown RBP20.92■□□□□ 0.94
PKP4-214ENST00000492496 GIGYF1O75420 1035 aaPredicted RBP20.91■□□□□ 0.94
PKP4-214ENST00000492496 GPR162Q16538 588 aa20.91■□□□□ 0.94
PKP4-214ENST00000492496 C10orf71Q711Q0 1435 aa20.91■□□□□ 0.94
PKP4-214ENST00000492496 BCL2L12Q9HB09 334 aa20.91■□□□□ 0.94
PKP4-214ENST00000492496 KIAA1551Q9HCM1 1747 aa20.91■□□□□ 0.94
PKP4-214ENST00000492496 NRXN2Q9P2S2 1712 aa20.9■□□□□ 0.94
PKP4-214ENST00000492496 ZNF330Q9Y3S2 320 aaPredicted RBP20.9■□□□□ 0.94
PKP4-214ENST00000492496 POLRMTO00411 1230 aaKnown RBP20.89■□□□□ 0.93
PKP4-214ENST00000492496 KCNA4P22459 653 aa20.89■□□□□ 0.93
PKP4-214ENST00000492496 TGFB2P61812 414 aa20.89■□□□□ 0.93
PKP4-214ENST00000492496 DDR1Q08345 913 aa20.89■□□□□ 0.93
PKP4-214ENST00000492496 N4BP2Q86UW6 1770 aaPredicted RBP20.89■□□□□ 0.93
PKP4-214ENST00000492496 APAF1O14727 1248 aa20.88■□□□□ 0.93
PKP4-214ENST00000492496 MRS2Q9HD23 443 aa20.88■□□□□ 0.93
PKP4-214ENST00000492496 NFIXQ14938 502 aa20.87■□□□□ 0.93
PKP4-214ENST00000492496 PELP1Q8IZL8 1130 aaKnown RBP20.87■□□□□ 0.93
PKP4-214ENST00000492496 TBC1D2BQ9UPU7 963 aa20.87■□□□□ 0.93
PKP4-214ENST00000492496 NBPF26B4DH59 902 aa20.86■□□□□ 0.93
PKP4-214ENST00000492496 CHL1O00533 1208 aa20.86■□□□□ 0.93
PKP4-214ENST00000492496 PIP4K2AP48426 406 aaPredicted RBP20.86■□□□□ 0.93
PKP4-214ENST00000492496 NBPF10Q6P3W6 841 aaKnown RBP20.86■□□□□ 0.93
PKP4-214ENST00000492496 DZIP3Q86Y13 1208 aaKnown RBP20.86■□□□□ 0.93
PKP4-214ENST00000492496 NBPF15Q8N660 670 aa20.86■□□□□ 0.93
PKP4-214ENST00000492496 PXDNLA1KZ92 1463 aa20.86■□□□□ 0.93
PKP4-214ENST00000492496 BRCA1P38398 1863 aaKnown RBP20.86■□□□□ 0.93
PKP4-214ENST00000492496 GRIN3BO60391 1043 aa20.85■□□□□ 0.93
PKP4-214ENST00000492496 CAMTA2O94983 1202 aa20.85■□□□□ 0.93
PKP4-214ENST00000492496 ERBB4Q15303 1308 aa20.84■□□□□ 0.93
PKP4-214ENST00000492496 RGL2O15211 777 aa20.84■□□□□ 0.93
PKP4-214ENST00000492496 YBX3P16989 372 aaKnown RBP eCLIP20.84■□□□□ 0.93
PKP4-214ENST00000492496 CALD1Q05682 793 aaKnown RBP20.83■□□□□ 0.93
PKP4-214ENST00000492496 CLEC4GQ6UXB4 293 aa20.83■□□□□ 0.93
PKP4-214ENST00000492496 SERPINB2P05120 415 aa20.82■□□□□ 0.92
PKP4-214ENST00000492496 YY1P25490 414 aa20.82■□□□□ 0.92
PKP4-214ENST00000492496 TBC1D9BQ66K14 1250 aa20.82■□□□□ 0.92
PKP4-214ENST00000492496 CFAP44Q96MT7 982 aa20.82■□□□□ 0.92
PKP4-214ENST00000492496 LAS1LQ9Y4W2 734 aaKnown RBP20.82■□□□□ 0.92
PKP4-214ENST00000492496 ZNF652Q9Y2D9 606 aa20.81■□□□□ 0.92
PKP4-214ENST00000492496 CARMIL3Q8ND23 1372 aa20.81■□□□□ 0.92
PKP4-214ENST00000492496 BICDL1Q6ZP65 573 aa20.8■□□□□ 0.92
PKP4-214ENST00000492496 NUP98P52948 1817 aa20.8■□□□□ 0.92
PKP4-214ENST00000492496 ARFGEF1Q9Y6D6 1849 aa20.79■□□□□ 0.92
PKP4-214ENST00000492496 A0A0G2JLW4 131 aa20.79■□□□□ 0.92
PKP4-214ENST00000492496 ZNF853P0CG23 659 aa20.79■□□□□ 0.92
PKP4-214ENST00000492496 NCBP3Q53F19 620 aaKnown RBP20.79■□□□□ 0.92
PKP4-214ENST00000492496 SETDB2Q96T68 719 aa20.79■□□□□ 0.92
PKP4-214ENST00000492496 DLEC1Q9Y238 1755 aa20.79■□□□□ 0.92
PKP4-214ENST00000492496 DPEP1P16444 411 aa20.78■□□□□ 0.92
PKP4-214ENST00000492496 CCDC27Q2M243 656 aa20.78■□□□□ 0.92
PKP4-214ENST00000492496 IFT57Q9NWB7 429 aa20.78■□□□□ 0.92
PKP4-214ENST00000492496 ANKRD31Q8N7Z5 1873 aa20.77■□□□□ 0.92
PKP4-214ENST00000492496 HOXB7P09629 217 aa20.77■□□□□ 0.92
PKP4-214ENST00000492496 EIF2S2P20042 333 aaKnown RBP20.77■□□□□ 0.92
PKP4-214ENST00000492496 GNAI1P63096 354 aa20.77■□□□□ 0.92
PKP4-214ENST00000492496 ERVV-1B6SEH8 477 aa20.76■□□□□ 0.91
PKP4-214ENST00000492496 MYL6BP14649 208 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms