RNA–Protein interactions for RNA: ENST00000492391.1

RP9-204, Transcript of RP9, pre-mRNA splicing factor, humanhuman

TSL 3

Gene RP9, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-204ENST00000492391 DCTN1Q14203 1278 aa11.4□□□□□ -0.58
RP9-204ENST00000492391 SMIM5Q71RC9 77 aa11.4□□□□□ -0.58
RP9-204ENST00000492391 NUDCQ9Y266 331 aa11.4□□□□□ -0.58
RP9-204ENST00000492391 C4BP0C0L5 1744 aa11.4□□□□□ -0.58
RP9-204ENST00000492391 PALLDQ8WX93 1383 aa11.4□□□□□ -0.59
RP9-204ENST00000492391 MAP3K5Q99683 1374 aa11.4□□□□□ -0.59
RP9-204ENST00000492391 KCNQ3O43525 872 aa11.39□□□□□ -0.59
RP9-204ENST00000492391 PNISRQ8TF01 805 aaKnown RBP11.39□□□□□ -0.59
RP9-204ENST00000492391 SLC52A2Q9HAB3 445 aa11.39□□□□□ -0.59
RP9-204ENST00000492391 TMOD3Q9NYL9 352 aa11.39□□□□□ -0.59
RP9-204ENST00000492391 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
RP9-204ENST00000492391 GNAT3A8MTJ3 354 aa11.38□□□□□ -0.59
RP9-204ENST00000492391 SLC39A6Q13433 755 aa11.38□□□□□ -0.59
RP9-204ENST00000492391 C1orf141Q5JVX7 400 aa11.38□□□□□ -0.59
RP9-204ENST00000492391 MCM10Q7L590 875 aa11.38□□□□□ -0.59
RP9-204ENST00000492391 CCDC146Q8IYE0 955 aa11.38□□□□□ -0.59
RP9-204ENST00000492391 THUMPD2Q9BTF0 503 aaKnown RBP11.38□□□□□ -0.59
RP9-204ENST00000492391 LOC102724428A0A0B4J2F2 783 aa11.37□□□□□ -0.59
RP9-204ENST00000492391 HSP90AB1P08238 724 aaKnown RBP11.37□□□□□ -0.59
RP9-204ENST00000492391 SIK1P57059 783 aa11.37□□□□□ -0.59
RP9-204ENST00000492391 CABP4P57796 275 aa11.37□□□□□ -0.59
RP9-204ENST00000492391 SLC15A2Q16348 729 aa11.37□□□□□ -0.59
RP9-204ENST00000492391 SLC27A3Q5K4L6 730 aa11.37□□□□□ -0.59
RP9-204ENST00000492391 LINC00116Q8NCU8 138 aa11.37□□□□□ -0.59
RP9-204ENST00000492391 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
RP9-204ENST00000492391 RIOK3O14730 519 aaKnown RBP11.36□□□□□ -0.59
RP9-204ENST00000492391 NFE2L2Q16236 605 aa11.36□□□□□ -0.59
RP9-204ENST00000492391 GAS2L2Q8NHY3 880 aa11.36□□□□□ -0.59
RP9-204ENST00000492391 CCNL1Q9UK58 526 aaPredicted RBP11.36□□□□□ -0.59
RP9-204ENST00000492391 TRIM35Q9UPQ4 493 aa11.36□□□□□ -0.59
RP9-204ENST00000492391 TMPOP42166 694 aaKnown RBP11.35□□□□□ -0.59
RP9-204ENST00000492391 RRP7AQ9Y3A4 280 aaKnown RBP11.35□□□□□ -0.59
RP9-204ENST00000492391 C4AP0C0L4 1744 aa11.35□□□□□ -0.59
RP9-204ENST00000492391 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
RP9-204ENST00000492391 SENP3-EIF4A1A0A087X0R7 540 aa11.34□□□□□ -0.59
RP9-204ENST00000492391 PTCD1O75127 700 aaKnown RBP11.34□□□□□ -0.59
RP9-204ENST00000492391 NUBP1P53384 320 aa11.34□□□□□ -0.59
RP9-204ENST00000492391 MIS18AQ9NYP9 233 aa11.34□□□□□ -0.59
RP9-204ENST00000492391 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
RP9-204ENST00000492391 HTATSF1O43719 755 aaKnown RBP11.33□□□□□ -0.6
RP9-204ENST00000492391 DCAF8Q5TAQ9 597 aa11.33□□□□□ -0.6
RP9-204ENST00000492391 COL23A1Q86Y22 540 aaPredicted RBP11.33□□□□□ -0.6
RP9-204ENST00000492391 SMARCC1Q92922 1105 aaPredicted RBP11.33□□□□□ -0.6
RP9-204ENST00000492391 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
RP9-204ENST00000492391 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
RP9-204ENST00000492391 LRP5O75197 1615 aa11.33□□□□□ -0.6
RP9-204ENST00000492391 HEG1Q9ULI3 1381 aa11.32□□□□□ -0.6
RP9-204ENST00000492391 PRAMEF22A3QJZ6 481 aa11.32□□□□□ -0.6
RP9-204ENST00000492391 ANP32CO43423 234 aa11.32□□□□□ -0.6
RP9-204ENST00000492391 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
RP9-204ENST00000492391 INTS5Q6P9B9 1019 aaKnown RBP11.32□□□□□ -0.6
RP9-204ENST00000492391 ZNF790Q6PG37 636 aa11.32□□□□□ -0.6
RP9-204ENST00000492391 RUNDC1Q96C34 613 aa11.32□□□□□ -0.6
RP9-204ENST00000492391 APAF1O14727 1248 aa11.31□□□□□ -0.6
RP9-204ENST00000492391 PTGER2P43116 358 aa11.31□□□□□ -0.6
RP9-204ENST00000492391 RIPK4P57078 832 aa11.31□□□□□ -0.6
RP9-204ENST00000492391 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
RP9-204ENST00000492391 DNAJC10Q8IXB1 793 aa11.31□□□□□ -0.6
RP9-204ENST00000492391 CYP19A1P11511 503 aaPredicted RBP11.3□□□□□ -0.6
RP9-204ENST00000492391 MRS2Q9HD23 443 aa11.3□□□□□ -0.6
RP9-204ENST00000492391 STK32BQ9NY57 414 aa11.3□□□□□ -0.6
RP9-204ENST00000492391 GTPBP6O43824 516 aaPredicted RBP11.29□□□□□ -0.6
RP9-204ENST00000492391 ZBTB7AO95365 584 aa11.29□□□□□ -0.6
RP9-204ENST00000492391 WDR43Q15061 677 aaKnown RBP eCLIP11.29□□□□□ -0.6
RP9-204ENST00000492391 TAF7Q15545 349 aaPredicted RBP11.29□□□□□ -0.6
RP9-204ENST00000492391 NEUROD2Q15784 382 aa11.29□□□□□ -0.6
RP9-204ENST00000492391 BTBD11A6QL63 1104 aa11.28□□□□□ -0.6
RP9-204ENST00000492391 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
RP9-204ENST00000492391 TEFQ10587 303 aa11.28□□□□□ -0.6
RP9-204ENST00000492391 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
RP9-204ENST00000492391 PHF12Q96QT6 1004 aa11.28□□□□□ -0.6
RP9-204ENST00000492391 USP16Q9Y5T5 823 aa11.28□□□□□ -0.6
RP9-204ENST00000492391 LAMB4A4D0S4 1761 aa11.28□□□□□ -0.6
RP9-204ENST00000492391 CHL1O00533 1208 aa11.27□□□□□ -0.61
RP9-204ENST00000492391 ZNF853P0CG23 659 aa11.27□□□□□ -0.61
RP9-204ENST00000492391 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
RP9-204ENST00000492391 TFCP2L1Q9NZI6 479 aa11.27□□□□□ -0.61
RP9-204ENST00000492391 CNTNAP4Q9C0A0 1308 aa11.27□□□□□ -0.61
RP9-204ENST00000492391 MAPK8IP3Q9UPT6 1336 aa11.27□□□□□ -0.61
RP9-204ENST00000492391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
RP9-204ENST00000492391 STK25O00506 426 aa11.26□□□□□ -0.61
RP9-204ENST00000492391 RPS6KA4O75676 772 aa11.26□□□□□ -0.61
RP9-204ENST00000492391 A1BGP04217 495 aa11.26□□□□□ -0.61
RP9-204ENST00000492391 CHRM1P11229 460 aaPredicted RBP11.26□□□□□ -0.61
RP9-204ENST00000492391 EIF4A1P60842 406 aaKnown RBP11.26□□□□□ -0.61
RP9-204ENST00000492391 KRT24Q2M2I5 525 aa11.26□□□□□ -0.61
RP9-204ENST00000492391 RTF1Q92541 710 aaKnown RBP11.26□□□□□ -0.61
RP9-204ENST00000492391 RYDENQ9NUL5 291 aaKnown RBP11.26□□□□□ -0.61
RP9-204ENST00000492391 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
RP9-204ENST00000492391 NBPF26B4DH59 902 aa11.25□□□□□ -0.61
RP9-204ENST00000492391 GNPATO15228 680 aa11.25□□□□□ -0.61
RP9-204ENST00000492391 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
RP9-204ENST00000492391 NBPF10Q6P3W6 841 aaKnown RBP11.25□□□□□ -0.61
RP9-204ENST00000492391 NBPF15Q8N660 670 aa11.25□□□□□ -0.61
RP9-204ENST00000492391 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
RP9-204ENST00000492391 PNNQ9H307 717 aaKnown RBP11.25□□□□□ -0.61
RP9-204ENST00000492391 ZBTB1Q9Y2K1 713 aa11.25□□□□□ -0.61
RP9-204ENST00000492391 KIAA1551Q9HCM1 1747 aa11.24□□□□□ -0.61
RP9-204ENST00000492391 NUP98P52948 1817 aa11.24□□□□□ -0.61
RP9-204ENST00000492391 GIGYF1O75420 1035 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms