RNA–Protein interactions for RNA: ENST00000492331.1

MCF2L2-213, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 661 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-213ENST00000492331 GRIN3BO60391 1043 aa12.87□□□□□ -0.35
MCF2L2-213ENST00000492331 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
MCF2L2-213ENST00000492331 FKBP8Q14318 412 aa12.87□□□□□ -0.35
MCF2L2-213ENST00000492331 USPL1Q5W0Q7 1092 aa12.87□□□□□ -0.35
MCF2L2-213ENST00000492331 NPM2Q86SE8 214 aaKnown RBP12.87□□□□□ -0.35
MCF2L2-213ENST00000492331 CICQ96RK0 1608 aaPredicted RBP12.87□□□□□ -0.35
MCF2L2-213ENST00000492331 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
MCF2L2-213ENST00000492331 USP42Q9H9J4 1324 aaKnown RBP12.87□□□□□ -0.35
MCF2L2-213ENST00000492331 UBR2Q8IWV8 1755 aa12.86□□□□□ -0.35
MCF2L2-213ENST00000492331 COL15A1P39059 1388 aa12.85□□□□□ -0.35
MCF2L2-213ENST00000492331 TAF7Q15545 349 aaPredicted RBP12.85□□□□□ -0.35
MCF2L2-213ENST00000492331 NFE2L2Q16236 605 aa12.85□□□□□ -0.35
MCF2L2-213ENST00000492331 PLEKHF1Q96S99 279 aa12.85□□□□□ -0.35
MCF2L2-213ENST00000492331 MIS18AQ9NYP9 233 aa12.85□□□□□ -0.35
MCF2L2-213ENST00000492331 NARFQ9UHQ1 456 aa12.85□□□□□ -0.35
MCF2L2-213ENST00000492331 CHD4Q14839 1912 aa12.85□□□□□ -0.35
MCF2L2-213ENST00000492331 A0A087WZG4 1122 aa12.84□□□□□ -0.35
MCF2L2-213ENST00000492331 A0A0G2JLW4 131 aa12.84□□□□□ -0.35
MCF2L2-213ENST00000492331 A1BGP04217 495 aa12.84□□□□□ -0.35
MCF2L2-213ENST00000492331 TGFB2P61812 414 aa12.83□□□□□ -0.36
MCF2L2-213ENST00000492331 WDR43Q15061 677 aaKnown RBP eCLIP12.83□□□□□ -0.36
MCF2L2-213ENST00000492331 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
MCF2L2-213ENST00000492331 DLG5Q8TDM6 1919 aa12.83□□□□□ -0.36
MCF2L2-213ENST00000492331 PRAMEF22A3QJZ6 481 aa12.82□□□□□ -0.36
MCF2L2-213ENST00000492331 SNRPA1P09661 255 aaKnown RBP12.82□□□□□ -0.36
MCF2L2-213ENST00000492331 TM4SF1P30408 202 aa12.82□□□□□ -0.36
MCF2L2-213ENST00000492331 EIF5P55010 431 aaKnown RBP12.82□□□□□ -0.36
MCF2L2-213ENST00000492331 RIPK4P57078 832 aa12.82□□□□□ -0.36
MCF2L2-213ENST00000492331 DDR1Q08345 913 aa12.82□□□□□ -0.36
MCF2L2-213ENST00000492331 BICDL1Q6ZP65 573 aa12.82□□□□□ -0.36
MCF2L2-213ENST00000492331 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
MCF2L2-213ENST00000492331 THUMPD2Q9BTF0 503 aaKnown RBP12.82□□□□□ -0.36
MCF2L2-213ENST00000492331 TBC1D2BQ9UPU7 963 aa12.82□□□□□ -0.36
MCF2L2-213ENST00000492331 DPEP1P16444 411 aa12.81□□□□□ -0.36
MCF2L2-213ENST00000492331 IL6STP40189 918 aaPredicted RBP12.81□□□□□ -0.36
MCF2L2-213ENST00000492331 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
MCF2L2-213ENST00000492331 NFIXQ14938 502 aa12.81□□□□□ -0.36
MCF2L2-213ENST00000492331 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
MCF2L2-213ENST00000492331 ZNF784Q8NCA9 323 aaPredicted RBP12.81□□□□□ -0.36
MCF2L2-213ENST00000492331 PNISRQ8TF01 805 aaKnown RBP12.81□□□□□ -0.36
MCF2L2-213ENST00000492331 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
MCF2L2-213ENST00000492331 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
MCF2L2-213ENST00000492331 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
MCF2L2-213ENST00000492331 C10orf71Q711Q0 1435 aa12.8□□□□□ -0.36
MCF2L2-213ENST00000492331 POLRMTO00411 1230 aaKnown RBP12.8□□□□□ -0.36
MCF2L2-213ENST00000492331 BCL2L12Q9HB09 334 aa12.8□□□□□ -0.36
MCF2L2-213ENST00000492331 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
MCF2L2-213ENST00000492331 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
MCF2L2-213ENST00000492331 SERPINB2P05120 415 aa12.79□□□□□ -0.36
MCF2L2-213ENST00000492331 KIF13BQ9NQT8 1826 aa12.78□□□□□ -0.36
MCF2L2-213ENST00000492331 TMPOP42166 694 aaKnown RBP12.78□□□□□ -0.36
MCF2L2-213ENST00000492331 DZIP3Q86Y13 1208 aaKnown RBP12.78□□□□□ -0.36
MCF2L2-213ENST00000492331 ADAMTS8Q9UP79 889 aa12.78□□□□□ -0.36
MCF2L2-213ENST00000492331 NPHP1O15259 732 aa12.77□□□□□ -0.37
MCF2L2-213ENST00000492331 CHRNA5P30532 468 aa12.77□□□□□ -0.37
MCF2L2-213ENST00000492331 LMOD3Q0VAK6 560 aa12.77□□□□□ -0.37
MCF2L2-213ENST00000492331 TBC1D9BQ66K14 1250 aa12.77□□□□□ -0.37
MCF2L2-213ENST00000492331 ARHGAP27Q6ZUM4 889 aa12.77□□□□□ -0.37
MCF2L2-213ENST00000492331 NGEFQ8N5V2 710 aa12.77□□□□□ -0.37
MCF2L2-213ENST00000492331 RUNDC1Q96C34 613 aa12.77□□□□□ -0.37
MCF2L2-213ENST00000492331 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
MCF2L2-213ENST00000492331 TSPYL4Q9UJ04 414 aa12.77□□□□□ -0.37
MCF2L2-213ENST00000492331 UTRNP46939 3433 aa12.76□□□□□ -0.37
MCF2L2-213ENST00000492331 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
MCF2L2-213ENST00000492331 EIF4A1P60842 406 aaKnown RBP12.76□□□□□ -0.37
MCF2L2-213ENST00000492331 SETDB2Q96T68 719 aa12.76□□□□□ -0.37
MCF2L2-213ENST00000492331 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
MCF2L2-213ENST00000492331 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
MCF2L2-213ENST00000492331 GIGYF1O75420 1035 aaPredicted RBP12.75□□□□□ -0.37
MCF2L2-213ENST00000492331 CAMTA2O94983 1202 aa12.75□□□□□ -0.37
MCF2L2-213ENST00000492331 KCNA3P22001 575 aa12.75□□□□□ -0.37
MCF2L2-213ENST00000492331 AFDNP55196 1824 aaKnown RBP12.75□□□□□ -0.37
MCF2L2-213ENST00000492331 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
MCF2L2-213ENST00000492331 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
MCF2L2-213ENST00000492331 GOLGB1Q14789 3259 aaKnown RBP12.74□□□□□ -0.37
MCF2L2-213ENST00000492331 NBPF26B4DH59 902 aa12.74□□□□□ -0.37
MCF2L2-213ENST00000492331 NBPF10Q6P3W6 841 aaKnown RBP12.74□□□□□ -0.37
MCF2L2-213ENST00000492331 CCDC24Q8N4L8 307 aa12.74□□□□□ -0.37
MCF2L2-213ENST00000492331 NBPF15Q8N660 670 aa12.74□□□□□ -0.37
MCF2L2-213ENST00000492331 ZNF652Q9Y2D9 606 aa12.74□□□□□ -0.37
MCF2L2-213ENST00000492331 CARMIL3Q8ND23 1372 aa12.73□□□□□ -0.37
MCF2L2-213ENST00000492331 H0YIN7 160 aa12.73□□□□□ -0.37
MCF2L2-213ENST00000492331 MYL6BP14649 208 aa12.73□□□□□ -0.37
MCF2L2-213ENST00000492331 C2CD5Q86YS7 1000 aa12.73□□□□□ -0.37
MCF2L2-213ENST00000492331 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
MCF2L2-213ENST00000492331 SCN7AQ01118 1682 aa12.73□□□□□ -0.37
MCF2L2-213ENST00000492331 FAM177BA6PVY3 158 aa12.72□□□□□ -0.37
MCF2L2-213ENST00000492331 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
MCF2L2-213ENST00000492331 CNBD1Q8NA66 436 aa12.72□□□□□ -0.37
MCF2L2-213ENST00000492331 LAMB4A4D0S4 1761 aa12.71□□□□□ -0.37
MCF2L2-213ENST00000492331 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.37
MCF2L2-213ENST00000492331 PDE6BP35913 854 aa12.71□□□□□ -0.37
MCF2L2-213ENST00000492331 ST5P78524 1137 aa12.71□□□□□ -0.37
MCF2L2-213ENST00000492331 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.37
MCF2L2-213ENST00000492331 CLEC4GQ6UXB4 293 aa12.71□□□□□ -0.37
MCF2L2-213ENST00000492331 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.37
MCF2L2-213ENST00000492331 ZNF622Q969S3 477 aaKnown RBP eCLIP12.71□□□□□ -0.37
MCF2L2-213ENST00000492331 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.37
MCF2L2-213ENST00000492331 NIP7Q9Y221 180 aaKnown RBP eCLIP12.71□□□□□ -0.37
MCF2L2-213ENST00000492331 ATP10DQ9P241 1426 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms