RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 LINC00116Q8NCU8 138 aa20.42■□□□□ 0.86
NELFCD-211ENST00000492016 USP16Q9Y5T5 823 aa20.42■□□□□ 0.86
NELFCD-211ENST00000492016 TSPYL6Q8N831 410 aa20.41■□□□□ 0.86
NELFCD-211ENST00000492016 PRAMEF22A3QJZ6 481 aa20.4■□□□□ 0.86
NELFCD-211ENST00000492016 VAMP4O75379 141 aa20.4■□□□□ 0.86
NELFCD-211ENST00000492016 CRKLP46109 303 aaKnown RBP20.4■□□□□ 0.86
NELFCD-211ENST00000492016 HDGFL1Q5TGJ6 251 aa20.4■□□□□ 0.86
NELFCD-211ENST00000492016 CCDC87Q9NVE4 849 aa20.4■□□□□ 0.86
NELFCD-211ENST00000492016 KCNQ4P56696 695 aa20.39■□□□□ 0.85
NELFCD-211ENST00000492016 CCDC30Q5VVM6 783 aa20.39■□□□□ 0.85
NELFCD-211ENST00000492016 LAMB4A4D0S4 1761 aa20.39■□□□□ 0.85
NELFCD-211ENST00000492016 COL5A3P25940 1745 aaPredicted RBP20.39■□□□□ 0.85
NELFCD-211ENST00000492016 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
NELFCD-211ENST00000492016 NBPF14Q5TI25 921 aa20.38■□□□□ 0.85
NELFCD-211ENST00000492016 AKT1S1Q96B36 256 aa20.38■□□□□ 0.85
NELFCD-211ENST00000492016 C4BP0C0L5 1744 aa20.37■□□□□ 0.85
NELFCD-211ENST00000492016 INTS5Q6P9B9 1019 aaKnown RBP20.37■□□□□ 0.85
NELFCD-211ENST00000492016 AK7Q96M32 723 aa20.37■□□□□ 0.85
NELFCD-211ENST00000492016 DBF4Q9UBU7 674 aaPredicted RBP20.37■□□□□ 0.85
NELFCD-211ENST00000492016 RPS6KA4O75676 772 aa20.36■□□□□ 0.85
NELFCD-211ENST00000492016 EIF2S2P20042 333 aaKnown RBP20.36■□□□□ 0.85
NELFCD-211ENST00000492016 IL6STP40189 918 aaPredicted RBP20.36■□□□□ 0.85
NELFCD-211ENST00000492016 STK32BQ9NY57 414 aa20.36■□□□□ 0.85
NELFCD-211ENST00000492016 TAF1LQ8IZX4 1826 aa20.36■□□□□ 0.85
NELFCD-211ENST00000492016 NUP188Q5SRE5 1749 aa20.36■□□□□ 0.85
NELFCD-211ENST00000492016 A1BGP04217 495 aa20.35■□□□□ 0.85
NELFCD-211ENST00000492016 ADRA2BP18089 450 aa20.35■□□□□ 0.85
NELFCD-211ENST00000492016 DDX21Q9NR30 783 aaKnown RBP eCLIP20.35■□□□□ 0.85
NELFCD-211ENST00000492016 SSFA2P28290 1259 aa20.34■□□□□ 0.85
NELFCD-211ENST00000492016 SLC15A2Q16348 729 aa20.34■□□□□ 0.85
NELFCD-211ENST00000492016 ALDH1L2Q3SY69 923 aa20.34■□□□□ 0.85
NELFCD-211ENST00000492016 FLAD1Q8NFF5 587 aa20.34■□□□□ 0.85
NELFCD-211ENST00000492016 STK31Q9BXU1 1019 aa20.34■□□□□ 0.85
NELFCD-211ENST00000492016 ZBTB1Q9Y2K1 713 aa20.34■□□□□ 0.85
NELFCD-211ENST00000492016 RTCBQ9Y3I0 505 aaKnown RBP20.34■□□□□ 0.85
NELFCD-211ENST00000492016 GNPATO15228 680 aa20.33■□□□□ 0.85
NELFCD-211ENST00000492016 EIF5P55010 431 aaKnown RBP20.33■□□□□ 0.85
NELFCD-211ENST00000492016 PDIA6Q15084 440 aa20.33■□□□□ 0.85
NELFCD-211ENST00000492016 HYPKQ9NX55 129 aa20.33■□□□□ 0.85
NELFCD-211ENST00000492016 NBPF26B4DH59 902 aa20.32■□□□□ 0.84
NELFCD-211ENST00000492016 ZNF827Q17R98 1081 aa20.32■□□□□ 0.84
NELFCD-211ENST00000492016 NBPF10Q6P3W6 841 aaKnown RBP20.32■□□□□ 0.84
NELFCD-211ENST00000492016 NPM2Q86SE8 214 aaKnown RBP20.32■□□□□ 0.84
NELFCD-211ENST00000492016 NBPF15Q8N660 670 aa20.32■□□□□ 0.84
NELFCD-211ENST00000492016 A0A087WZG4 1122 aa20.31■□□□□ 0.84
NELFCD-211ENST00000492016 CANXP27824 592 aaKnown RBP20.31■□□□□ 0.84
NELFCD-211ENST00000492016 ANO8Q9HCE9 1232 aaPredicted RBP20.31■□□□□ 0.84
NELFCD-211ENST00000492016 TFCP2L1Q9NZI6 479 aa20.31■□□□□ 0.84
NELFCD-211ENST00000492016 CHPF2Q9P2E5 772 aa20.31■□□□□ 0.84
NELFCD-211ENST00000492016 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
NELFCD-211ENST00000492016 LRP10Q7Z4F1 713 aa20.3■□□□□ 0.84
NELFCD-211ENST00000492016 NECTIN2Q92692 538 aa20.3■□□□□ 0.84
NELFCD-211ENST00000492016 RGL2O15211 777 aa20.29■□□□□ 0.84
NELFCD-211ENST00000492016 TRAPPC3LQ5T215 181 aa20.29■□□□□ 0.84
NELFCD-211ENST00000492016 RARSP54136 660 aaKnown RBP20.28■□□□□ 0.84
NELFCD-211ENST00000492016 COL15A1P39059 1388 aa20.28■□□□□ 0.84
NELFCD-211ENST00000492016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.27■□□□□ 0.84
NELFCD-211ENST00000492016 SLC4A2P04920 1241 aa20.27■□□□□ 0.84
NELFCD-211ENST00000492016 MYL6BP14649 208 aa20.27■□□□□ 0.84
NELFCD-211ENST00000492016 MYH14Q7Z406 1995 aaKnown RBP20.26■□□□□ 0.83
NELFCD-211ENST00000492016 PROSER3Q2NL68 480 aa20.26■□□□□ 0.83
NELFCD-211ENST00000492016 SSH1Q8WYL5 1049 aa20.26■□□□□ 0.83
NELFCD-211ENST00000492016 PNPLA7Q6ZV29 1317 aa20.26■□□□□ 0.83
NELFCD-211ENST00000492016 QSER1Q2KHR3 1735 aa20.25■□□□□ 0.83
NELFCD-211ENST00000492016 PIP4K2AP48426 406 aaPredicted RBP20.25■□□□□ 0.83
NELFCD-211ENST00000492016 ARHGEF1Q92888 912 aaKnown RBP20.25■□□□□ 0.83
NELFCD-211ENST00000492016 UBR3Q6ZT12 1888 aa20.24■□□□□ 0.83
NELFCD-211ENST00000492016 RFC4P35249 363 aa20.24■□□□□ 0.83
NELFCD-211ENST00000492016 COPS6Q7L5N1 327 aa20.24■□□□□ 0.83
NELFCD-211ENST00000492016 AMIGO3Q86WK7 504 aa20.24■□□□□ 0.83
NELFCD-211ENST00000492016 DZIP3Q86Y13 1208 aaKnown RBP20.24■□□□□ 0.83
NELFCD-211ENST00000492016 MRPL50Q8N5N7 158 aaKnown RBP20.24■□□□□ 0.83
NELFCD-211ENST00000492016 SMC4Q9NTJ3 1288 aa20.24■□□□□ 0.83
NELFCD-211ENST00000492016 NARFQ9UHQ1 456 aa20.24■□□□□ 0.83
NELFCD-211ENST00000492016 ERVV-1B6SEH8 477 aa20.23■□□□□ 0.83
NELFCD-211ENST00000492016 PHF14O94880 888 aa20.23■□□□□ 0.83
NELFCD-211ENST00000492016 DDX58O95786 925 aaKnown RBP20.23■□□□□ 0.83
NELFCD-211ENST00000492016 ANXA1P04083 346 aa20.23■□□□□ 0.83
NELFCD-211ENST00000492016 KIF6Q6ZMV9 814 aa20.23■□□□□ 0.83
NELFCD-211ENST00000492016 COL23A1Q86Y22 540 aaPredicted RBP20.23■□□□□ 0.83
NELFCD-211ENST00000492016 SLC16A10Q8TF71 515 aa20.23■□□□□ 0.83
NELFCD-211ENST00000492016 XAGE3Q8WTP9 111 aa20.23■□□□□ 0.83
NELFCD-211ENST00000492016 KIF16BQ96L93 1317 aa20.23■□□□□ 0.83
NELFCD-211ENST00000492016 TCERG1O14776 1098 aaKnown RBP20.22■□□□□ 0.83
NELFCD-211ENST00000492016 FLIIQ13045 1269 aa20.22■□□□□ 0.83
NELFCD-211ENST00000492016 RCAN3Q9UKA8 241 aa20.22■□□□□ 0.83
NELFCD-211ENST00000492016 ZNF330Q9Y3S2 320 aaPredicted RBP20.22■□□□□ 0.83
NELFCD-211ENST00000492016 PTPRCP08575 1304 aa20.22■□□□□ 0.83
NELFCD-211ENST00000492016 USP42Q9H9J4 1324 aaKnown RBP20.22■□□□□ 0.83
NELFCD-211ENST00000492016 ZPR1O75312 459 aa20.21■□□□□ 0.83
NELFCD-211ENST00000492016 CLEC4GQ6UXB4 293 aa20.21■□□□□ 0.83
NELFCD-211ENST00000492016 PLBD2Q8NHP8 589 aa20.21■□□□□ 0.83
NELFCD-211ENST00000492016 PHAXQ9H814 394 aaKnown RBP20.21■□□□□ 0.83
NELFCD-211ENST00000492016 MAP3K15Q6ZN16 1313 aa20.21■□□□□ 0.83
NELFCD-211ENST00000492016 TTLL7Q6ZT98 887 aa20.2■□□□□ 0.82
NELFCD-211ENST00000492016 ANKRD13DQ6ZTN6 518 aa20.2■□□□□ 0.82
NELFCD-211ENST00000492016 ARHGAP45Q92619 1136 aa20.2■□□□□ 0.82
NELFCD-211ENST00000492016 TBC1D2BQ9UPU7 963 aa20.2■□□□□ 0.82
NELFCD-211ENST00000492016 ZNF652Q9Y2D9 606 aa20.2■□□□□ 0.82
NELFCD-211ENST00000492016 CACNA1FO60840 1977 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms