RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 PIM2Q9P1W9 311 aa11.64□□□□□ -0.55
HPS4-215ENST00000491142 KCPQ6ZWJ8 1503 aa11.64□□□□□ -0.55
HPS4-215ENST00000491142 C4AP0C0L4 1744 aa11.63□□□□□ -0.55
HPS4-215ENST00000491142 DALRD3Q5D0E6 543 aaKnown RBP11.63□□□□□ -0.55
HPS4-215ENST00000491142 DCAF5Q96JK2 942 aa11.63□□□□□ -0.55
HPS4-215ENST00000491142 RNF181Q9P0P0 153 aa11.63□□□□□ -0.55
HPS4-215ENST00000491142 PLEKHG2Q9H7P9 1386 aa11.63□□□□□ -0.55
HPS4-215ENST00000491142 KDM2BQ8NHM5 1336 aa11.62□□□□□ -0.55
HPS4-215ENST00000491142 CNTNAP4Q9C0A0 1308 aa11.62□□□□□ -0.55
HPS4-215ENST00000491142 ERVV-2B6SEH9 535 aa11.62□□□□□ -0.55
HPS4-215ENST00000491142 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
HPS4-215ENST00000491142 EIF4A2Q14240 407 aaKnown RBP11.62□□□□□ -0.55
HPS4-215ENST00000491142 TNS4Q8IZW8 715 aa11.62□□□□□ -0.55
HPS4-215ENST00000491142 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
HPS4-215ENST00000491142 SRP68Q9UHB9 627 aaKnown RBP11.62□□□□□ -0.55
HPS4-215ENST00000491142 BRCA1P38398 1863 aaKnown RBP11.61□□□□□ -0.55
HPS4-215ENST00000491142 CHRNA5P30532 468 aa11.61□□□□□ -0.55
HPS4-215ENST00000491142 DDR1Q08345 913 aa11.61□□□□□ -0.55
HPS4-215ENST00000491142 FKBP8Q14318 412 aa11.61□□□□□ -0.55
HPS4-215ENST00000491142 PRKRIP1Q9H875 184 aaPredicted RBP11.61□□□□□ -0.55
HPS4-215ENST00000491142 PTCD1O75127 700 aaKnown RBP11.6□□□□□ -0.55
HPS4-215ENST00000491142 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
HPS4-215ENST00000491142 CABP4P57796 275 aa11.6□□□□□ -0.55
HPS4-215ENST00000491142 CDCA8Q53HL2 280 aa11.6□□□□□ -0.55
HPS4-215ENST00000491142 ARFGEF1Q9Y6D6 1849 aa11.59□□□□□ -0.55
HPS4-215ENST00000491142 TNNT2P45379 298 aaPredicted RBP11.59□□□□□ -0.55
HPS4-215ENST00000491142 CRKLP46109 303 aaKnown RBP11.59□□□□□ -0.55
HPS4-215ENST00000491142 PRELPP51888 382 aa11.59□□□□□ -0.55
HPS4-215ENST00000491142 SMC1BQ8NDV3 1235 aa11.59□□□□□ -0.55
HPS4-215ENST00000491142 COL5A3P25940 1745 aaPredicted RBP11.59□□□□□ -0.55
HPS4-215ENST00000491142 ANKRD26Q9UPS8 1709 aa11.59□□□□□ -0.55
HPS4-215ENST00000491142 MYH14Q7Z406 1995 aaKnown RBP11.59□□□□□ -0.55
HPS4-215ENST00000491142 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
HPS4-215ENST00000491142 HSP90AB1P08238 724 aaKnown RBP11.58□□□□□ -0.56
HPS4-215ENST00000491142 RASSF7Q02833 373 aa11.58□□□□□ -0.56
HPS4-215ENST00000491142 KDM6AO15550 1401 aaPredicted RBP11.58□□□□□ -0.56
HPS4-215ENST00000491142 ZNF831Q5JPB2 1677 aa11.58□□□□□ -0.56
HPS4-215ENST00000491142 POLRMTO00411 1230 aaKnown RBP11.57□□□□□ -0.56
HPS4-215ENST00000491142 TM4SF1P30408 202 aa11.57□□□□□ -0.56
HPS4-215ENST00000491142 PLEKHO1Q53GL0 409 aaPredicted RBP11.57□□□□□ -0.56
HPS4-215ENST00000491142 ZNF530Q6P9A1 599 aaPredicted RBP11.57□□□□□ -0.56
HPS4-215ENST00000491142 NFATC2IPQ8NCF5 419 aa11.57□□□□□ -0.56
HPS4-215ENST00000491142 HAX1O00165 279 aa11.56□□□□□ -0.56
HPS4-215ENST00000491142 HSPA1AP0DMV8 641 aaKnown RBP11.56□□□□□ -0.56
HPS4-215ENST00000491142 HSPA1BP0DMV9 641 aaKnown RBP11.56□□□□□ -0.56
HPS4-215ENST00000491142 MTHFSP49914 203 aa11.56□□□□□ -0.56
HPS4-215ENST00000491142 INTS5Q6P9B9 1019 aaKnown RBP11.56□□□□□ -0.56
HPS4-215ENST00000491142 SBF1O95248 1867 aa11.55□□□□□ -0.56
HPS4-215ENST00000491142 VEGFAP15692 232 aaPredicted RBP11.55□□□□□ -0.56
HPS4-215ENST00000491142 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
HPS4-215ENST00000491142 TNRC6CQ9HCJ0 1690 aaKnown RBP11.55□□□□□ -0.56
HPS4-215ENST00000491142 GLTPD2A6NH11 291 aa11.54□□□□□ -0.56
HPS4-215ENST00000491142 AMOTQ4VCS5 1084 aa11.54□□□□□ -0.56
HPS4-215ENST00000491142 USPL1Q5W0Q7 1092 aa11.54□□□□□ -0.56
HPS4-215ENST00000491142 AEBP1Q8IUX7 1158 aa11.54□□□□□ -0.56
HPS4-215ENST00000491142 ZPR1O75312 459 aa11.53□□□□□ -0.56
HPS4-215ENST00000491142 LMNB1P20700 586 aa11.53□□□□□ -0.56
HPS4-215ENST00000491142 C1orf141Q5JVX7 400 aa11.53□□□□□ -0.56
HPS4-215ENST00000491142 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
HPS4-215ENST00000491142 POTECB2RU33 542 aa11.52□□□□□ -0.57
HPS4-215ENST00000491142 NFIXQ14938 502 aa11.52□□□□□ -0.57
HPS4-215ENST00000491142 DNAJC10Q8IXB1 793 aa11.52□□□□□ -0.57
HPS4-215ENST00000491142 POLR3GLQ9BT43 218 aa11.52□□□□□ -0.57
HPS4-215ENST00000491142 ADAMTS7Q9UKP4 1686 aa11.51□□□□□ -0.57
HPS4-215ENST00000491142 SOS1Q07889 1333 aaPredicted RBP11.51□□□□□ -0.57
HPS4-215ENST00000491142 TJP1Q07157 1748 aa11.51□□□□□ -0.57
HPS4-215ENST00000491142 NFKBIEO00221 500 aa11.5□□□□□ -0.57
HPS4-215ENST00000491142 SERPINB2P05120 415 aa11.5□□□□□ -0.57
HPS4-215ENST00000491142 CYP19A1P11511 503 aaPredicted RBP11.5□□□□□ -0.57
HPS4-215ENST00000491142 C2CD5Q86YS7 1000 aa11.5□□□□□ -0.57
HPS4-215ENST00000491142 TTLL6Q8N841 843 aa11.5□□□□□ -0.57
HPS4-215ENST00000491142 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
HPS4-215ENST00000491142 NARFQ9UHQ1 456 aa11.5□□□□□ -0.57
HPS4-215ENST00000491142 SULT6B1Q6IMI4 303 aa11.49□□□□□ -0.57
HPS4-215ENST00000491142 LGR6Q9HBX8 967 aa11.49□□□□□ -0.57
HPS4-215ENST00000491142 SUPT16HQ9Y5B9 1047 aaKnown RBP11.49□□□□□ -0.57
HPS4-215ENST00000491142 H0YIN7 160 aa11.48□□□□□ -0.57
HPS4-215ENST00000491142 SLC39A6Q13433 755 aa11.48□□□□□ -0.57
HPS4-215ENST00000491142 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
HPS4-215ENST00000491142 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
HPS4-215ENST00000491142 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
HPS4-215ENST00000491142 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
HPS4-215ENST00000491142 ZBTB1Q9Y2K1 713 aa11.48□□□□□ -0.57
HPS4-215ENST00000491142 CARMIL3Q8ND23 1372 aa11.48□□□□□ -0.57
HPS4-215ENST00000491142 AFDNP55196 1824 aaKnown RBP11.48□□□□□ -0.57
HPS4-215ENST00000491142 COL15A1P39059 1388 aa11.47□□□□□ -0.57
HPS4-215ENST00000491142 HNRNPUQ00839 825 aaKnown RBP eCLIP11.47□□□□□ -0.57
HPS4-215ENST00000491142 EVX2Q03828 476 aa11.47□□□□□ -0.57
HPS4-215ENST00000491142 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
HPS4-215ENST00000491142 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
HPS4-215ENST00000491142 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
HPS4-215ENST00000491142 NRXN2Q9P2S2 1712 aa11.46□□□□□ -0.57
HPS4-215ENST00000491142 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
HPS4-215ENST00000491142 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
HPS4-215ENST00000491142 RALBP1Q15311 655 aa11.46□□□□□ -0.57
HPS4-215ENST00000491142 AKAP4Q5JQC9 854 aa11.46□□□□□ -0.57
HPS4-215ENST00000491142 PANK3Q9H999 370 aa11.46□□□□□ -0.57
HPS4-215ENST00000491142 CCDC88AQ3V6T2 1871 aa11.45□□□□□ -0.58
HPS4-215ENST00000491142 ZBED9Q6R2W3 1325 aa11.45□□□□□ -0.58
HPS4-215ENST00000491142 C21orf2O43822 256 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms