RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 ADRA2BP18089 450 aa18.07■□□□□ 0.48
TRAIP-211ENST00000491060 BICDL1Q6ZP65 573 aa18.07■□□□□ 0.48
TRAIP-211ENST00000491060 COL15A1P39059 1388 aa18.06■□□□□ 0.48
TRAIP-211ENST00000491060 USP42Q9H9J4 1324 aaKnown RBP18.06■□□□□ 0.48
TRAIP-211ENST00000491060 A0A0G2JLW4 131 aa18.06■□□□□ 0.48
TRAIP-211ENST00000491060 CCDC146Q8IYE0 955 aa18.06■□□□□ 0.48
TRAIP-211ENST00000491060 HEG1Q9ULI3 1381 aa18.05■□□□□ 0.48
TRAIP-211ENST00000491060 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
TRAIP-211ENST00000491060 A1BGP04217 495 aa18.05■□□□□ 0.48
TRAIP-211ENST00000491060 DDR1Q08345 913 aa18.05■□□□□ 0.48
TRAIP-211ENST00000491060 FMNL2Q96PY5 1086 aa18.05■□□□□ 0.48
TRAIP-211ENST00000491060 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
TRAIP-211ENST00000491060 RALBP1Q15311 655 aa18.04■□□□□ 0.48
TRAIP-211ENST00000491060 TBC1D2BQ9UPU7 963 aa18.04■□□□□ 0.48
TRAIP-211ENST00000491060 RRP7AQ9Y3A4 280 aaKnown RBP18.04■□□□□ 0.48
TRAIP-211ENST00000491060 CEMIPQ8WUJ3 1361 aa18.04■□□□□ 0.48
TRAIP-211ENST00000491060 KIAA1551Q9HCM1 1747 aa18.03■□□□□ 0.48
TRAIP-211ENST00000491060 KIF13BQ9NQT8 1826 aa18.03■□□□□ 0.48
TRAIP-211ENST00000491060 STARD3NLO95772 234 aa18.03■□□□□ 0.48
TRAIP-211ENST00000491060 DPEP1P16444 411 aa18.02■□□□□ 0.48
TRAIP-211ENST00000491060 NEUROD2Q15784 382 aa18.02■□□□□ 0.48
TRAIP-211ENST00000491060 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
TRAIP-211ENST00000491060 ZNF784Q8NCA9 323 aaPredicted RBP18.02■□□□□ 0.48
TRAIP-211ENST00000491060 BCS1LQ9Y276 419 aa18.02■□□□□ 0.48
TRAIP-211ENST00000491060 MYBBP1AQ9BQG0 1328 aaKnown RBP18.01■□□□□ 0.47
TRAIP-211ENST00000491060 VSIG10Q8N0Z9 540 aa18.01■□□□□ 0.47
TRAIP-211ENST00000491060 PLEKHF1Q96S99 279 aa18.01■□□□□ 0.47
TRAIP-211ENST00000491060 USP16Q9Y5T5 823 aa18.01■□□□□ 0.47
TRAIP-211ENST00000491060 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
TRAIP-211ENST00000491060 C10orf71Q711Q0 1435 aa18■□□□□ 0.47
TRAIP-211ENST00000491060 SENP3-EIF4A1A0A087X0R7 540 aa18■□□□□ 0.47
TRAIP-211ENST00000491060 GRIN3BO60391 1043 aa18■□□□□ 0.47
TRAIP-211ENST00000491060 CHRNA5P30532 468 aa18■□□□□ 0.47
TRAIP-211ENST00000491060 NFE2L2Q16236 605 aa18■□□□□ 0.47
TRAIP-211ENST00000491060 NGEFQ8N5V2 710 aa18■□□□□ 0.47
TRAIP-211ENST00000491060 ZNF526Q8TF50 670 aaPredicted RBP18■□□□□ 0.47
TRAIP-211ENST00000491060 BCL2L12Q9HB09 334 aa18■□□□□ 0.47
TRAIP-211ENST00000491060 NARFQ9UHQ1 456 aa18■□□□□ 0.47
TRAIP-211ENST00000491060 NFIXQ14938 502 aa17.99■□□□□ 0.47
TRAIP-211ENST00000491060 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
TRAIP-211ENST00000491060 POLRMTO00411 1230 aaKnown RBP17.98■□□□□ 0.47
TRAIP-211ENST00000491060 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.47
TRAIP-211ENST00000491060 TAF7Q15545 349 aaPredicted RBP17.98■□□□□ 0.47
TRAIP-211ENST00000491060 KDM3BQ7LBC6 1761 aa17.97■□□□□ 0.47
TRAIP-211ENST00000491060 RIPK4P57078 832 aa17.97■□□□□ 0.47
TRAIP-211ENST00000491060 SCN7AQ01118 1682 aa17.96■□□□□ 0.47
TRAIP-211ENST00000491060 TM4SF1P30408 202 aa17.96■□□□□ 0.47
TRAIP-211ENST00000491060 EIF5P55010 431 aaKnown RBP17.96■□□□□ 0.47
TRAIP-211ENST00000491060 TBC1D9BQ66K14 1250 aa17.96■□□□□ 0.47
TRAIP-211ENST00000491060 TEX13AQ9BXU3 409 aaPredicted RBP17.96■□□□□ 0.47
TRAIP-211ENST00000491060 BRCA1P38398 1863 aaKnown RBP17.95■□□□□ 0.46
TRAIP-211ENST00000491060 CACNA1SQ13698 1873 aa17.95■□□□□ 0.46
TRAIP-211ENST00000491060 LAMB4A4D0S4 1761 aa17.95■□□□□ 0.46
TRAIP-211ENST00000491060 A0A087WZG4 1122 aa17.95■□□□□ 0.46
TRAIP-211ENST00000491060 FAM177BA6PVY3 158 aa17.95■□□□□ 0.46
TRAIP-211ENST00000491060 HTATSF1O43719 755 aaKnown RBP17.95■□□□□ 0.46
TRAIP-211ENST00000491060 SERPINB2P05120 415 aa17.95■□□□□ 0.46
TRAIP-211ENST00000491060 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
TRAIP-211ENST00000491060 ARHGAP27Q6ZUM4 889 aa17.95■□□□□ 0.46
TRAIP-211ENST00000491060 PNNQ9H307 717 aaKnown RBP17.95■□□□□ 0.46
TRAIP-211ENST00000491060 LAS1LQ9Y4W2 734 aaKnown RBP17.95■□□□□ 0.46
TRAIP-211ENST00000491060 UTRNP46939 3433 aa17.95■□□□□ 0.46
TRAIP-211ENST00000491060 NPHP1O15259 732 aa17.94■□□□□ 0.46
TRAIP-211ENST00000491060 TGFB2P61812 414 aa17.94■□□□□ 0.46
TRAIP-211ENST00000491060 DZIP3Q86Y13 1208 aaKnown RBP17.94■□□□□ 0.46
TRAIP-211ENST00000491060 BCORQ6W2J9 1755 aa17.94■□□□□ 0.46
TRAIP-211ENST00000491060 CARMIL3Q8ND23 1372 aa17.93■□□□□ 0.46
TRAIP-211ENST00000491060 ZEB1P37275 1124 aaPredicted RBP17.93■□□□□ 0.46
TRAIP-211ENST00000491060 PRKRIP1Q9H875 184 aaPredicted RBP17.93■□□□□ 0.46
TRAIP-211ENST00000491060 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
TRAIP-211ENST00000491060 MYL6BP14649 208 aa17.92■□□□□ 0.46
TRAIP-211ENST00000491060 IL6STP40189 918 aaPredicted RBP17.92■□□□□ 0.46
TRAIP-211ENST00000491060 NECTIN2Q92692 538 aa17.92■□□□□ 0.46
TRAIP-211ENST00000491060 TSPYL4Q9UJ04 414 aa17.92■□□□□ 0.46
TRAIP-211ENST00000491060 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
TRAIP-211ENST00000491060 ANKRD31Q8N7Z5 1873 aa17.91■□□□□ 0.46
TRAIP-211ENST00000491060 NBPF26B4DH59 902 aa17.91■□□□□ 0.46
TRAIP-211ENST00000491060 TMPOP42166 694 aaKnown RBP17.91■□□□□ 0.46
TRAIP-211ENST00000491060 NBPF10Q6P3W6 841 aaKnown RBP17.91■□□□□ 0.46
TRAIP-211ENST00000491060 NBPF15Q8N660 670 aa17.91■□□□□ 0.46
TRAIP-211ENST00000491060 ADAMTS8Q9UP79 889 aa17.91■□□□□ 0.46
TRAIP-211ENST00000491060 CAMTA2O94983 1202 aa17.9■□□□□ 0.46
TRAIP-211ENST00000491060 KCNA3P22001 575 aa17.9■□□□□ 0.46
TRAIP-211ENST00000491060 C2CD5Q86YS7 1000 aa17.9■□□□□ 0.46
TRAIP-211ENST00000491060 PIM2Q9P1W9 311 aa17.9■□□□□ 0.46
TRAIP-211ENST00000491060 GOLGB1Q14789 3259 aaKnown RBP17.9■□□□□ 0.46
TRAIP-211ENST00000491060 NRXN2Q9P2S2 1712 aa17.89■□□□□ 0.46
TRAIP-211ENST00000491060 ARFGEF1Q9Y6D6 1849 aa17.89■□□□□ 0.45
TRAIP-211ENST00000491060 EIF2S2P20042 333 aaKnown RBP17.89■□□□□ 0.45
TRAIP-211ENST00000491060 DALRD3Q5D0E6 543 aaKnown RBP17.89■□□□□ 0.45
TRAIP-211ENST00000491060 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
TRAIP-211ENST00000491060 CCDC184Q52MB2 194 aa17.88■□□□□ 0.45
TRAIP-211ENST00000491060 PNISRQ8TF01 805 aaKnown RBP17.88■□□□□ 0.45
TRAIP-211ENST00000491060 COL11A2P13942 1736 aaPredicted RBP17.87■□□□□ 0.45
TRAIP-211ENST00000491060 ANXA1P04083 346 aa17.87■□□□□ 0.45
TRAIP-211ENST00000491060 ZNF622Q969S3 477 aaKnown RBP eCLIP17.87■□□□□ 0.45
TRAIP-211ENST00000491060 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
TRAIP-211ENST00000491060 SETDB2Q96T68 719 aa17.87■□□□□ 0.45
TRAIP-211ENST00000491060 CCDC88AQ3V6T2 1871 aa17.86■□□□□ 0.45
TRAIP-211ENST00000491060 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms