RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 CCNL1Q9UK58 526 aaPredicted RBP16.94■□□□□ 0.3
SNX12-205ENST00000490561 USP16Q9Y5T5 823 aa16.94■□□□□ 0.3
SNX12-205ENST00000490561 RGPD3A6NKT7 1758 aaPredicted RBP16.94■□□□□ 0.3
SNX12-205ENST00000490561 RGPD4Q7Z3J3 1758 aa16.94■□□□□ 0.3
SNX12-205ENST00000490561 TJP1Q07157 1748 aa16.93■□□□□ 0.3
SNX12-205ENST00000490561 TNS1Q9HBL0 1735 aaKnown RBP16.93■□□□□ 0.3
SNX12-205ENST00000490561 PRAMEF22A3QJZ6 481 aa16.93■□□□□ 0.3
SNX12-205ENST00000490561 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
SNX12-205ENST00000490561 DDX21Q9NR30 783 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNX12-205ENST00000490561 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
SNX12-205ENST00000490561 CYP19A1P11511 503 aaPredicted RBP16.92■□□□□ 0.3
SNX12-205ENST00000490561 MS4A1P11836 297 aa16.92■□□□□ 0.3
SNX12-205ENST00000490561 CANXP27824 592 aaKnown RBP16.92■□□□□ 0.3
SNX12-205ENST00000490561 ARHGAP45Q92619 1136 aa16.92■□□□□ 0.3
SNX12-205ENST00000490561 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
SNX12-205ENST00000490561 PTPRCP08575 1304 aa16.92■□□□□ 0.3
SNX12-205ENST00000490561 CACNA1FO60840 1977 aa16.91■□□□□ 0.3
SNX12-205ENST00000490561 BCAR3O75815 825 aa16.91■□□□□ 0.3
SNX12-205ENST00000490561 RRP1P56182 461 aaKnown RBP16.91■□□□□ 0.3
SNX12-205ENST00000490561 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
SNX12-205ENST00000490561 RNF123Q5XPI4 1314 aa16.91■□□□□ 0.3
SNX12-205ENST00000490561 CNTNAP4Q9C0A0 1308 aa16.91■□□□□ 0.3
SNX12-205ENST00000490561 BAG6P46379 1132 aa16.9■□□□□ 0.3
SNX12-205ENST00000490561 ITPK1Q13572 414 aa16.9■□□□□ 0.3
SNX12-205ENST00000490561 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
SNX12-205ENST00000490561 ZKSCAN2Q63HK3 967 aa16.9■□□□□ 0.3
SNX12-205ENST00000490561 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
SNX12-205ENST00000490561 CCDC87Q9NVE4 849 aa16.9■□□□□ 0.3
SNX12-205ENST00000490561 NPM2Q86SE8 214 aaKnown RBP16.89■□□□□ 0.29
SNX12-205ENST00000490561 API5Q9BZZ5 524 aaKnown RBP16.89■□□□□ 0.29
SNX12-205ENST00000490561 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
SNX12-205ENST00000490561 COL5A3P25940 1745 aaPredicted RBP16.89■□□□□ 0.29
SNX12-205ENST00000490561 TCERG1O14776 1098 aaKnown RBP16.88■□□□□ 0.29
SNX12-205ENST00000490561 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
SNX12-205ENST00000490561 IL6STP40189 918 aaPredicted RBP16.88■□□□□ 0.29
SNX12-205ENST00000490561 CRKLP46109 303 aaKnown RBP16.88■□□□□ 0.29
SNX12-205ENST00000490561 FLIIQ13045 1269 aa16.88■□□□□ 0.29
SNX12-205ENST00000490561 PDIA6Q15084 440 aa16.88■□□□□ 0.29
SNX12-205ENST00000490561 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
SNX12-205ENST00000490561 RREB1Q92766 1687 aa16.88■□□□□ 0.29
SNX12-205ENST00000490561 A1BGP04217 495 aa16.87■□□□□ 0.29
SNX12-205ENST00000490561 LINC00116Q8NCU8 138 aa16.87■□□□□ 0.29
SNX12-205ENST00000490561 FRAT1Q92837 279 aaPredicted RBP16.87■□□□□ 0.29
SNX12-205ENST00000490561 NOB1Q9ULX3 412 aaKnown RBP16.87■□□□□ 0.29
SNX12-205ENST00000490561 A0A087WZG4 1122 aa16.86■□□□□ 0.29
SNX12-205ENST00000490561 MYL6BP14649 208 aa16.86■□□□□ 0.29
SNX12-205ENST00000490561 ATF7IPQ6VMQ6 1270 aa16.86■□□□□ 0.29
SNX12-205ENST00000490561 NBPF26B4DH59 902 aa16.85■□□□□ 0.29
SNX12-205ENST00000490561 NEFLP07196 543 aa16.85■□□□□ 0.29
SNX12-205ENST00000490561 FKBP5Q13451 457 aaPredicted RBP16.85■□□□□ 0.29
SNX12-205ENST00000490561 PDE3AQ14432 1141 aa16.85■□□□□ 0.29
SNX12-205ENST00000490561 NBPF14Q5TI25 921 aa16.85■□□□□ 0.29
SNX12-205ENST00000490561 NBPF10Q6P3W6 841 aaKnown RBP16.85■□□□□ 0.29
SNX12-205ENST00000490561 INTS5Q6P9B9 1019 aaKnown RBP16.85■□□□□ 0.29
SNX12-205ENST00000490561 NBPF15Q8N660 670 aa16.85■□□□□ 0.29
SNX12-205ENST00000490561 ZBTB1Q9Y2K1 713 aa16.85■□□□□ 0.29
SNX12-205ENST00000490561 PROSER3Q2NL68 480 aa16.84■□□□□ 0.29
SNX12-205ENST00000490561 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
SNX12-205ENST00000490561 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
SNX12-205ENST00000490561 FTSJ3Q8IY81 847 aaKnown RBP16.84■□□□□ 0.29
SNX12-205ENST00000490561 AK7Q96M32 723 aa16.84■□□□□ 0.29
SNX12-205ENST00000490561 CAMKK2Q96RR4 588 aa16.84■□□□□ 0.29
SNX12-205ENST00000490561 LRRC4BQ9NT99 713 aa16.84■□□□□ 0.29
SNX12-205ENST00000490561 C4BP0C0L5 1744 aa16.84■□□□□ 0.29
SNX12-205ENST00000490561 TAF1LQ8IZX4 1826 aa16.84■□□□□ 0.29
SNX12-205ENST00000490561 ANXA1P04083 346 aa16.83■□□□□ 0.28
SNX12-205ENST00000490561 TRIM27P14373 513 aa16.83■□□□□ 0.28
SNX12-205ENST00000490561 G2E3Q7L622 706 aa16.83■□□□□ 0.28
SNX12-205ENST00000490561 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.28
SNX12-205ENST00000490561 PHAXQ9H814 394 aaKnown RBP16.83■□□□□ 0.28
SNX12-205ENST00000490561 PXDNLA1KZ92 1463 aa16.82■□□□□ 0.28
SNX12-205ENST00000490561 RGL2O15211 777 aa16.82■□□□□ 0.28
SNX12-205ENST00000490561 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
SNX12-205ENST00000490561 ADRA2BP18089 450 aa16.82■□□□□ 0.28
SNX12-205ENST00000490561 EIF5P55010 431 aaKnown RBP16.82■□□□□ 0.28
SNX12-205ENST00000490561 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
SNX12-205ENST00000490561 COPS6Q7L5N1 327 aa16.82■□□□□ 0.28
SNX12-205ENST00000490561 DZIP1LQ8IYY4 767 aaKnown RBP16.82■□□□□ 0.28
SNX12-205ENST00000490561 PROM2Q8N271 834 aa16.82■□□□□ 0.28
SNX12-205ENST00000490561 RTCBQ9Y3I0 505 aaKnown RBP16.82■□□□□ 0.28
SNX12-205ENST00000490561 EN1Q05925 392 aaPredicted RBP16.81■□□□□ 0.28
SNX12-205ENST00000490561 PLBD2Q8NHP8 589 aa16.81■□□□□ 0.28
SNX12-205ENST00000490561 COL15A1P39059 1388 aa16.8■□□□□ 0.28
SNX12-205ENST00000490561 ABCC4O15439 1325 aa16.8■□□□□ 0.28
SNX12-205ENST00000490561 GNPATO15228 680 aa16.8■□□□□ 0.28
SNX12-205ENST00000490561 PLIN1O60240 522 aa16.8■□□□□ 0.28
SNX12-205ENST00000490561 PIP4K2AP48426 406 aaPredicted RBP16.8■□□□□ 0.28
SNX12-205ENST00000490561 KCNQ4P56696 695 aa16.8■□□□□ 0.28
SNX12-205ENST00000490561 AIMP1Q12904 312 aaKnown RBP16.8■□□□□ 0.28
SNX12-205ENST00000490561 EZH2Q15910 746 aaKnown RBP16.8■□□□□ 0.28
SNX12-205ENST00000490561 ANKRD13DQ6ZTN6 518 aa16.8■□□□□ 0.28
SNX12-205ENST00000490561 RIC3Q7Z5B4 369 aa16.8■□□□□ 0.28
SNX12-205ENST00000490561 CHMP4BQ9H444 224 aaKnown RBP16.8■□□□□ 0.28
SNX12-205ENST00000490561 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
SNX12-205ENST00000490561 ERVV-1B6SEH8 477 aa16.79■□□□□ 0.28
SNX12-205ENST00000490561 SSFA2P28290 1259 aa16.79■□□□□ 0.28
SNX12-205ENST00000490561 CCT4P50991 539 aaKnown RBP16.79■□□□□ 0.28
SNX12-205ENST00000490561 FLAD1Q8NFF5 587 aa16.79■□□□□ 0.28
SNX12-205ENST00000490561 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
SNX12-205ENST00000490561 EP400Q96L91 3159 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms